Scirpophaga incertulas
the yellow stem borer or rice yellow stem borer
Scirpophaga incertulas, the yellow stem borer or rice yellow stem borer, is a species of moth of the family Crambidae. It was described by Francis Walker in 1863.
Host Genome
| Genome ID | Level | BUSCO Assessment |
|---|---|---|
| - | Chromosome |
C:95.4%[S:88.8%,D:6.6%],F:1.5%,M:3.1%,n:1367
|
Related Symbionts
22 recordsSymbiont records associated with Scirpophaga incertulas
| Classification | Function | Function Tags | Reference | |
|---|---|---|---|---|
|
Bacillus species BB2_1A
Bacillota |
Bacteria
|
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases … |
Digestive enzymes
|
|
|
Bacillus sp. PR 1.7
Bacillota |
Bacteria
|
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases … |
Digestive enzymes
|
|
|
Bacillus subtilis AQ1
Bacillota |
Bacteria
|
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases … |
Digestive enzymes
|
|
|
Bacillus subtilis C1YNoneNone1
Bacillota |
Bacteria
|
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases … |
Digestive enzymes
|
|
|
Enterobacter species DHM1T
Pseudomonadota |
Bacteria
|
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases … |
Digestive enzymes
|
|
|
Klebsiella pneumoniae L-13
Pseudomonadota |
Bacteria
|
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases … |
Digestive enzymes
|
|
|
Klebsiella pneumoniae L-13
Pseudomonadota |
Bacteria
|
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases … |
Digestive enzymes
|
|
|
Microbacteriaceae bacterium BMC-3
Actinomycetota |
Bacteria
|
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases … |
Digestive enzymes
|
|
|
Microbacteriaceae bacterium BMC-3
Actinomycetota |
Bacteria
|
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases … |
Digestive enzymes
|
|
|
Microbacteriaceae bacterium HLB-6
Actinomycetota |
Bacteria
|
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases … |
Digestive enzymes
|
|
|
Microbacterium arborescens DSM 2None754
Actinomycetota |
Bacteria
|
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases … |
Digestive enzymes
|
|
|
Microbacterium arborescens DSM 2None754
Actinomycetota |
Bacteria
|
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases … |
Digestive enzymes
|
|
|
Microbacterium arborescens JB8_2B
Actinomycetota |
Bacteria
|
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases … |
Digestive enzymes
|
|
|
Microbacterium oleivorans CCGE2277
Actinomycetota |
Bacteria
|
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases … |
Digestive enzymes
|
|
|
Pantoea agglomerans WAB1927
Pseudomonadota |
Bacteria
|
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases … |
Digestive enzymes
|
|
|
Pantoea species NCCP116
Pseudomonadota |
Bacteria
|
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases … |
Digestive enzymes
|
|
|
Serratia marcescens PS1
Pseudomonadota |
Bacteria
|
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases … |
Digestive enzymes
|
|
|
Acinetobacter calcoaceticus strain NRYSBAC-1
Pseudomonadota |
Bacteria
|
degrade Chlorpyrifos and Chlorantraniliprole in vitro |
Pesticide metabolization
|
|
|
Bacillus cereus strain NRYSBBC-1
Bacillota |
Bacteria
|
degrade Chlorpyrifos and Chlorantraniliprole in vitro |
Pesticide metabolization
|
|
|
Bacillus sp. strain NRYSBBP-1
Bacillota |
Bacteria
|
degrade Chlorpyrifos and Chlorantraniliprole in vitro |
Pesticide metabolization
|
|
|
Bacillus sp. strain NRYSBBS-1
Bacillota |
Bacteria
|
degrade Chlorpyrifos and Chlorantraniliprole in vitro |
Pesticide metabolization
|
|
|
Klebsiella sp. strain NRYSBKS-1
Pseudomonadota |
Bacteria
|
degrade Chlorpyrifos and Chlorantraniliprole in vitro |
Pesticide metabolization
|
Metagenome Information
0 recordsMetagenome sequencing data associated with Scirpophaga incertulas
| Run | Platform | Location | Date | BioProject |
|---|---|---|---|---|
No metagenomes foundNo metagenome records associated with this host species. |
||||
Amplicon Information
12 recordsAmplicon sequencing data associated with Scirpophaga incertulas
| Run | Classification | Platform | Location | Environment |
|---|---|---|---|---|
|
SRR16087858
AMPLICON |
16S
|
-
|
Malaysia
not collected |
-
|
|
SRR16087861
AMPLICON |
16S
|
-
|
Malaysia
not collected |
-
|
|
SRR16087826
AMPLICON |
16S
|
-
|
Malaysia
not collected |
-
|
|
SRR16087828
AMPLICON |
16S
|
-
|
Malaysia
not collected |
-
|
|
SRR16087842
AMPLICON |
16S
|
-
|
Malaysia
not collected |
-
|
|
SRR16087843
AMPLICON |
16S
|
-
|
Malaysia
not collected |
-
|
|
SRR16087814
AMPLICON |
16S
|
-
|
Malaysia
not collected |
-
|
|
SRR16087859
AMPLICON |
16S
|
-
|
Malaysia
not collected |
-
|
|
SRR16087844
AMPLICON |
16S
|
-
|
Malaysia
not collected |
-
|
|
SRR16087825
AMPLICON |
16S
|
-
|
Malaysia
not collected |
-
|
|
SRR16087849
AMPLICON |
16S
|
-
|
Malaysia
not collected |
-
|
|
SRR16087860
AMPLICON |
16S
|
-
|
Malaysia
not collected |
-
|
Related Articles
1 recordsResearch articles related to Scirpophaga incertulas
| Title | Authors | Journal | Year | DOI |
|---|---|---|---|---|
|
Goswami, S; Das, SB; Rath, PC ... Mohapatra, SD; Annamalai, M
|
JOURNAL OF ASIA-PACIFIC ENTOMOLOGY
|
2024
|
10.1016/j.aspen.2024.102229 |
Core Microbiome Composition
Core microbiome composition is derived from available metagenomic and amplicon sequencing data, calculated based on the relative abundance and coverage of symbionts across different samples. The representativeness of this analysis may vary depending on the number of available samples and should be considered as a reference guide. See calculation details in Help documentation