SRR21195470 - Aedes albopictus

Basic Information

Run: SRR21195470

Assay Type: WGS

Bioproject: PRJNA873190

Biosample: SAMN30491066

Bytes: 24680197

Center Name: PEST CONTROL DEPARTMENT

Sequencing Information

Instrument: Illumina HiSeq 2500

Library Layout: PAIRED

Library Selection: PCR

Platform: ILLUMINA

Geographic Information

Country: China

Continent: Asia

Location Name: China:Beijing

Latitude/Longitude: 39.54 N 116.25 E

Sample Information

Host: Aedes albopictus

Isolation: Sequence of the internal microbiota in Aedes albopictus after exposure to n-hexane

Biosample Model: Metagenome or environmental

Collection Date: 2022-05-18

Taxonomic Classification

Potential Symbionts

About Potential Symbionts

This table shows potential symbiont identified in the metagenome sample. Matches are scored based on:

Relative abundance in the sample
Species-level matches with known symbionts
Host insect order matches with reference records
Completeness and richness of functional records

Note: only the three highest scoring comparison records were retained for each symbiont species or genus in the sample

Based on our current records database, this section aims to identify potential functional symbionts in this metagenome sample, with scoring based on:

Relative abundance in sample
Species-level matches with known symbionts
Host insect order matches
Functional record completeness

Note: Showing top 3 highest scoring records for each species/genus

Symbiont Name	Record	Host Species	Function	Abundance	Score Score Composition: Symbiont Abundance Species match bonus Host match bonus Function richness Higher scores indicate stronger symbiotic relationship potential
Escherichia coli Species-level Match Host Order Match	RISB1769	Calliphoridae Order: Diptera	None	51.92%	66.9
Escherichia coli Species-level Match	RISB1339	Manduca sexta Order: Lepidoptera	modulate immunity-related gene expression in the infected F0 larvae, and also in their offspring, triggered immune responses in the infected host associated with shifts in both DNA methylation and histone acetylation	51.92%	61.2
Escherichia coli Species-level Match	RISB0128	Tribolium castaneum Order: Coleoptera	may produce 4,8-dimethyldecanal (DMD) production that is strongly associated with attraction to females and host pheromone communication	51.92%	59.6
Wolbachia Host Order Match Host Species Match	RISB0957	Aedes albopictus Order: Diptera	antibiotics induced histopathological damage and reactive oxygen species production in the ovaries	9.71%	41.7
Wolbachia Host Order Match Host Species Match	RISB2323	Aedes albopictus Order: Diptera	induces cytoplasmic incompatibility and blocks dengue transmission in Aedes albopictus	9.71%	41.4
Wolbachia Host Order Match Host Species Match	RISB2617	Aedes albopictus Order: Diptera	induces cytoplasmic incompatibility	9.71%	40.4
Bacillus Host Order Match	RISB1866	Drosophila melanogaster Order: Diptera	The bacterial cells may thus be able to ameliorate the pH of the acidic region, by the release of weak bases.Additionally, the bacteria have a complex relationship with physiological processes which may affect ionic homeostasis in the gut, such as nutrition and immune function	3.36%	18.4
Bacillus Host Order Match	RISB0774	Delia antiqua Order: Diptera	showed significant contact inhibition activity against fungal entomopathogen Fusarium moniliforme, Botryosphaeria dothidea and both Fusarium oxysporum respectively	3.36%	16.6
Bacillus Host Order Match	RISB0185	Drosophila melanogaster Order: Diptera	enhancing the brain levels of tyrosine decarboxylase 2 (Tdc2), which is an enzyme that synthesizes octopamine (OA)	3.36%	15.6
Citrobacter Host Order Match	RISB1503	Bactrocera dorsalis Order: Diptera	Pesticide-degrading bacteria were frequently detected from pesticide-resistant insects. Susceptible insects became resistant after inoculation of the pesticide-degrading symbiont	0.52%	14.1
Citrobacter Host Order Match	RISB0192	Hermetia illucens Order: Diptera	can directly promote the expression of two gene families related to intestinal protein metabolism: Hitryp serine protease trypsin family and Himtp metallopeptidase family	0.52%	13.9
Citrobacter Host Order Match	RISB1221	Delia antiqua Order: Diptera	six bacteria protect larvae from infection with the entomopathogen Beauveria bassiana through symbiotic bacterium-derived organic acids	0.52%	13.2
Cupriavidus pauculus Species-level Match	RISB0694	Alydus tomentosus Order: Hemiptera	None	0.59%	5.6
Bacteroides	RISB0256	Leptocybe invasa Order: Hymenoptera	Differences in Male-Killing Rickettsia Bacteria between Lineages of the Invasive Gall-Causing Pest Leptocybe invasa	2.07%	4.4
Bacteroides	RISB0090	Hyphantria cunea Order: Lepidoptera	enhance the compatibility of invasive pests to new hosts and enable more rapid adaptation to new habitats.	2.07%	4.2
Bacteroides	RISB1183	Oryzaephilus surinamensis Order: Coleoptera	supplement precursors for the cuticle synthesis and thereby enhance desiccation resistance of its host	2.07%	4.1
Lachnospira	RISB2110	Blattella germanica Order: Blattodea	Hydrolyze polysaccharide; assist digestion; synthesize acetate, propionate, and butyrate	0.36%	2.1
Bradyrhizobium	RISB0135	Coccinella septempunctata Order: Coleoptera	be commonly found in plant roots and they all have nitrogen fixation abilities	0.39%	2.0