73.95 95259 95259 U 0 unclassified 26.05 33558 0 R 1 root 26.05 33557 6 R1 131567 cellular organisms 26.04 33544 6553 D 2 Bacteria 9.37 12075 17 P 1224 Pseudomonadota 6.38 8214 27 C 1236 Gammaproteobacteria 5.38 6931 19 O 91347 Enterobacterales 5.18 6678 74 F 543 Enterobacteriaceae 4.95 6373 12 G 561 Escherichia 4.94 6361 6308 S 562 Escherichia coli 0.04 49 49 S1 316435 Escherichia coli Nissle 1917 0.00 2 2 S1 244320 Escherichia coli O55:H7 0.00 1 1 S1 1322345 Escherichia coli ATCC 25922 0.00 1 1 S1 376725 Escherichia coli O103:H2 0.10 124 0 G 544 Citrobacter 0.10 124 124 S 2971264 Citrobacter enshiensis 0.03 39 0 G 547 Enterobacter 0.03 36 0 G1 354276 Enterobacter cloacae complex 0.02 29 29 S 299767 Enterobacter ludwigii 0.00 6 6 S 158836 Enterobacter hormaechei 0.00 1 1 S 208224 Enterobacter kobei 0.00 2 0 G1 2608935 unclassified Enterobacter 0.00 2 2 S 2707174 Enterobacter sp. T2 0.00 1 1 S 881260 Enterobacter bugandensis 0.03 37 0 F1 2890311 Klebsiella/Raoultella group 0.03 37 2 G 570 Klebsiella 0.02 31 17 S 573 Klebsiella pneumoniae 0.01 14 14 S1 72407 Klebsiella pneumoniae subsp. pneumoniae 0.00 3 2 S 1463165 Klebsiella quasipneumoniae 0.00 1 1 S1 1667327 Klebsiella quasipneumoniae subsp. quasipneumoniae 0.00 1 1 S 548 Klebsiella aerogenes 0.02 21 0 G 590 Salmonella 0.02 21 1 S 28901 Salmonella enterica 0.02 20 4 S1 59201 Salmonella enterica subsp. enterica 0.00 4 0 S2 611 Salmonella enterica subsp. enterica serovar Heidelberg 0.00 3 3 S3 1124936 Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 0.00 1 1 S3 1160717 Salmonella enterica subsp. enterica serovar Heidelberg str. B182 0.00 4 0 S2 58096 Salmonella enterica subsp. enterica serovar Bareilly 0.00 3 3 S3 1182177 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000752 0.00 1 1 S3 1182172 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000661 0.00 3 3 S2 2583588 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- 0.00 2 2 S2 90105 Salmonella enterica subsp. enterica serovar Saintpaul 0.00 1 1 S2 90370 Salmonella enterica subsp. enterica serovar Typhi 0.00 1 0 S2 108619 Salmonella enterica subsp. enterica serovar Newport 0.00 1 1 S3 858307 Salmonella enterica subsp. enterica serovar Newport str. CVM N1543 0.00 1 0 S2 1242084 Salmonella enterica subsp. enterica serovar Krefeld 0.00 1 1 S3 1242106 Salmonella enterica subsp. enterica serovar Krefeld str. SA20030536 0.00 4 0 G 620 Shigella 0.00 3 3 S 623 Shigella flexneri 0.00 1 1 S 621 Shigella boydii 0.00 3 0 F1 191675 Enterobacteriaceae incertae sedis 0.00 3 0 F2 84563 ant, tsetse, mealybug, aphid, etc. endosymbionts 0.00 2 0 F3 84564 ant endosymbionts 0.00 1 0 G 203804 Candidatus Blochmanniella 0.00 1 0 G1 711328 unclassified Candidatus Blochmanniella 0.00 1 1 S 1505596 Blochmannia endosymbiont of Polyrhachis (Hedomyrma) turneri 0.00 1 0 G 1699619 Candidatus Westeberhardia 0.00 1 1 S 1594731 Candidatus Westeberhardia cardiocondylae 0.00 1 0 F3 146507 aphid secondary symbionts 0.00 1 1 G 568987 Candidatus Hamiltonella 0.00 2 0 G 1330547 Kosakonia 0.00 1 1 S 208223 Kosakonia cowanii 0.00 1 0 G1 2632876 unclassified Kosakonia 0.00 1 1 S 2492396 Kosakonia sp. CCTCC M2018092 0.00 1 0 G 82976 Buttiauxella 0.00 1 0 G1 2634062 unclassified Buttiauxella 0.00 1 1 S 2986951 Buttiauxella sp. WJP83 0.12 155 92 F 1903411 Yersiniaceae 0.05 60 49 G 613 Serratia 0.00 5 5 S 61652 Serratia rubidaea 0.00 5 5 S 138074 Serratia symbiotica 0.00 1 0 G1 2647522 unclassified Serratia (in: enterobacteria) 0.00 1 1 S 2785630 Serratia sp. CMO1 0.00 3 0 G 629 Yersinia 0.00 1 0 S 29483 Yersinia aldovae 0.00 1 1 S1 1453495 Yersinia aldovae 670-83 0.00 1 0 G1 1649845 Yersinia pseudotuberculosis complex 0.00 1 0 S 632 Yersinia pestis 0.00 1 1 S1 1345705 Yersinia pestis 1522 0.00 1 1 S 935293 Yersinia entomophaga 0.03 43 0 F 1903414 Morganellaceae 0.03 36 0 G 586 Providencia 0.03 36 0 S 516075 Providencia sneebia 0.03 36 36 S1 1141660 Providencia sneebia DSM 19967 0.00 5 1 G 583 Proteus 0.00 4 4 S 584 Proteus mirabilis 0.00 2 0 G 626 Xenorhabdus 0.00 1 0 S 40577 Xenorhabdus poinarii 0.00 1 1 S1 1354304 Xenorhabdus poinarii G6 0.00 1 1 S 290110 Xenorhabdus budapestensis 0.02 31 0 F 2812006 Bruguierivoracaceae 0.02 31 0 G 84565 Sodalis 0.02 25 25 S 2697027 Sodalis ligni 0.00 5 0 S 1486991 Candidatus Sodalis pierantonius 0.00 5 5 S1 2342 Candidatus Sodalis pierantonius str. SOPE 0.00 1 1 S 1239307 Sodalis praecaptivus 0.00 5 0 F 1903409 Erwiniaceae 0.00 2 0 G 32199 Buchnera 0.00 2 1 S 9 Buchnera aphidicola 0.00 1 1 S1 98795 Buchnera aphidicola (Myzus persicae) 0.00 2 0 G 53335 Pantoea 0.00 1 1 S 2364647 Pantoea piersonii 0.00 1 1 S 1235990 Candidatus Pantoea carbekii 0.00 1 0 G 551 Erwinia 0.00 1 0 G1 2622719 unclassified Erwinia 0.00 1 1 S 3141543 Erwinia sp. HDF1-3R 0.43 552 0 O 72274 Pseudomonadales 0.43 552 4 F 135621 Pseudomonadaceae 0.42 546 459 G 286 Pseudomonas 0.03 35 0 G1 136843 Pseudomonas fluorescens group 0.02 21 21 S 29442 Pseudomonas tolaasii 0.00 6 0 S 47883 Pseudomonas synxantha 0.00 6 6 S1 96901 Pseudomonas synxantha BG33R 0.00 5 5 S 47878 Pseudomonas azotoformans 0.00 2 2 S 183795 Pseudomonas mediterranea 0.00 1 1 S 76761 Pseudomonas veronii 0.02 26 3 G1 196821 unclassified Pseudomonas 0.01 10 10 S 2892442 Pseudomonas sp. CIP-10 0.00 2 2 S 2954092 Pseudomonas sp. FP2335 0.00 2 2 S 2931382 Pseudomonas sp. PIA16 0.00 1 1 S 2870860 Pseudomonas sp. DNDY-54 0.00 1 1 S 2954094 Pseudomonas sp. FP453 0.00 1 1 S 2893890 Pseudomonas sp. KNUC1026 0.00 1 1 S 1357074 Pseudomonas sp. LS44 0.00 1 1 S 2559074 Pseudomonas sp. S150 0.00 1 1 S 2705472 Pseudomonas sp. MTM4 0.00 1 1 S 2954088 Pseudomonas sp. FP2262 0.00 1 1 S 2954080 Pseudomonas sp. FP1762 0.00 1 1 S 2730847 Pseudomonas sp. ADAK13 0.00 6 6 S 437900 Pseudomonas marincola 0.00 5 0 G1 136845 Pseudomonas putida group 0.00 3 3 S 303 Pseudomonas putida 0.00 2 2 S 78327 Pseudomonas mosselii 0.00 5 0 G1 136841 Pseudomonas aeruginosa group 0.00 5 5 S 287 Pseudomonas aeruginosa 0.00 2 2 S 2599595 Pseudomonas eucalypticola 0.00 1 1 S 237609 Pseudomonas alkylphenolica 0.00 1 1 S 2738125 Pseudomonas hefeiensis 0.00 1 1 S 2894079 Pseudomonas oryziphila 0.00 1 1 S 1302376 Candidatus Pseudomonas adelgestsugas 0.00 1 1 S 2954098 Pseudomonas wuhanensis 0.00 1 0 G1 136849 Pseudomonas syringae group 0.00 1 0 G2 251695 Pseudomonas syringae group genomosp. 1 0.00 1 0 S 317 Pseudomonas syringae 0.00 1 1 S1 1357285 Pseudomonas syringae CC457 0.00 1 0 G1 136842 Pseudomonas chlororaphis group 0.00 1 1 S 380021 Pseudomonas protegens 0.00 1 1 S 46677 Pseudomonas agarici 0.00 1 0 F1 351 Azotobacter group 0.00 1 1 G 352 Azotobacter 0.00 1 1 G 2758906 Entomomonas 0.26 340 0 O 135623 Vibrionales 0.26 340 1 F 641 Vibrionaceae 0.26 329 268 G 662 Vibrio 0.02 22 1 G1 717610 Vibrio harveyi group 0.01 11 0 G2 2315253 Vibrio diabolicus subgroup 0.01 11 11 S 50719 Vibrio diabolicus 0.00 6 0 S 670 Vibrio parahaemolyticus 0.00 5 5 S1 745023 Vibrio parahaemolyticus 10329 0.00 1 1 S1 1429044 Vibrio parahaemolyticus UCM-V493 0.00 3 3 S 669 Vibrio harveyi 0.00 1 1 S 663 Vibrio alginolyticus 0.01 7 1 G1 2614977 unclassified Vibrio 0.00 2 2 S 2819100 Vibrio sp. SCSIO 43140 0.00 2 2 S 2819096 Vibrio sp. SCSIO 43135 0.00 1 1 S 2661922 Vibrio sp. THAF191d 0.00 1 1 S 2751178 Vibrio sp. B1FLJ16 0.00 6 6 S 666 Vibrio cholerae 0.00 5 4 S 28171 Vibrio aestuarianus 0.00 1 1 S1 1443279 Vibrio aestuarianus subsp. francensis 0.00 3 0 S 672 Vibrio vulnificus 0.00 3 3 S1 1246305 Vibrio vulnificus Env1 0.00 3 3 S 664643 Vibrio plantisponsor 0.00 3 3 S 29494 Vibrio furnissii 0.00 2 2 S 104609 Vibrio penaeicida 0.00 2 2 S 170673 Vibrio kanaloae 0.00 2 2 S 29495 Vibrio navarrensis 0.00 2 2 S 675 Vibrio cincinnatiensis 0.00 1 1 S 687 Vibrio gazogenes 0.00 1 1 S 1824638 Vibrio japonicus 0.00 1 0 S 52443 Vibrio tapetis 0.00 1 1 S1 1671868 Vibrio tapetis subsp. tapetis 0.00 1 1 S 1074311 Vibrio alfacsensis 0.01 10 0 G 657 Photobacterium 0.01 9 9 S 38293 Photobacterium damselae 0.00 1 1 S 553611 Photobacterium leiognathi 0.10 129 0 O 135622 Alteromonadales 0.09 117 0 F 267888 Pseudoalteromonadaceae 0.09 117 48 G 53246 Pseudoalteromonas 0.04 48 48 S 2774154 Pseudoalteromonas ostreae 0.01 13 13 S 2518973 Pseudoalteromonas rhizosphaerae 0.00 2 0 S 206042 Pseudoalteromonas mariniglutinosa 0.00 2 2 S1 1315277 Pseudoalteromonas mariniglutinosa NCIMB 1770 0.00 2 0 G1 194690 unclassified Pseudoalteromonas 0.00 1 1 S 2951137 Pseudoalteromonas sp. KG3 0.00 1 1 S 1709477 Pseudoalteromonas sp. R3 0.00 1 1 S 43658 Pseudoalteromonas rubra 0.00 1 1 S 267375 Pseudoalteromonas marina 0.00 1 1 S 161398 Pseudoalteromonas phenolica 0.00 1 1 S 151081 Pseudoalteromonas ruthenica 0.00 5 0 F 267890 Shewanellaceae 0.00 5 2 G 22 Shewanella 0.00 1 1 S 712036 Shewanella dokdonensis 0.00 1 1 S 2864208 Shewanella mesophila 0.00 1 0 S 192073 Shewanella denitrificans 0.00 1 1 S1 318161 Shewanella denitrificans OS217 0.00 3 0 F 267891 Moritellaceae 0.00 3 0 G 58050 Moritella 0.00 3 0 S 90736 Moritella marina 0.00 3 3 S1 1202962 Moritella marina ATCC 15381 0.00 2 0 F 267893 Idiomarinaceae 0.00 2 1 G 135575 Idiomarina 0.00 1 1 S 135577 Idiomarina loihiensis 0.00 1 0 F 72275 Alteromonadaceae 0.00 1 0 G 1751872 Lacimicrobium 0.00 1 1 S 1526571 Lacimicrobium alkaliphilum 0.00 1 0 F 267894 Psychromonadaceae 0.00 1 0 G 67572 Psychromonas 0.00 1 0 S 357794 Psychromonas ingrahamii 0.00 1 1 S1 357804 Psychromonas ingrahamii 37 0.07 95 0 O 135614 Lysobacterales 0.07 95 0 F 32033 Lysobacteraceae 0.05 68 6 G 338 Xanthomonas 0.05 62 62 S 29447 Xanthomonas albilineans 0.02 22 0 G 83618 Pseudoxanthomonas 0.01 19 19 S 314722 Pseudoxanthomonas suwonensis 0.00 2 2 S 2480810 Pseudoxanthomonas winnipegensis 0.00 1 0 G1 2645906 unclassified Pseudoxanthomonas 0.00 1 1 S 1664560 Pseudoxanthomonas sp. SE1 0.00 3 1 G 40323 Stenotrophomonas 0.00 2 0 G1 995085 Stenotrophomonas maltophilia group 0.00 2 2 S 40324 Stenotrophomonas maltophilia 0.00 2 0 G 68 Lysobacter 0.00 2 2 S 2865112 Lysobacter terrestris 0.05 59 0 O 135625 Pasteurellales 0.05 59 2 F 712 Pasteurellaceae 0.03 45 8 G 724 Haemophilus 0.03 33 32 S 729 Haemophilus parainfluenzae 0.00 1 1 S1 862965 Haemophilus parainfluenzae T3T1 0.00 4 4 S 730 [Haemophilus] ducreyi 0.00 5 0 G 2899790 Mergibacter 0.00 5 5 S 221402 Mergibacter septicus 0.00 4 3 G 713 Actinobacillus 0.00 1 1 S 157339 Actinobacillus arthritidis 0.00 3 0 G 1960084 Rodentibacter 0.00 3 3 S 1796644 Rodentibacter caecimuris 0.04 57 0 O 2887326 Moraxellales 0.04 57 1 F 468 Moraxellaceae 0.03 38 24 G 469 Acinetobacter 0.00 6 1 G1 909768 Acinetobacter calcoaceticus/baumannii complex 0.00 5 4 S 470 Acinetobacter baumannii 0.00 1 1 S1 1279013 Acinetobacter baumannii PR07 0.00 3 3 S 756892 Acinetobacter indicus 0.00 2 2 S 29430 Acinetobacter haemolyticus 0.00 2 2 G1 196816 unclassified Acinetobacter 0.00 1 1 S 2006115 Acinetobacter piscicola 0.01 12 12 G 475 Moraxella 0.00 6 3 G 497 Psychrobacter 0.00 3 0 G1 196806 unclassified Psychrobacter 0.00 2 2 S 3064892 Psychrobacter sp. van23A 0.00 1 1 S 3043330 Psychrobacter sp. WB2 0.01 11 0 O 135619 Oceanospirillales 0.01 7 3 F 28256 Halomonadaceae 0.00 3 0 G 2745 Halomonas 0.00 3 3 G1 2609666 unclassified Halomonas 0.00 1 0 G 404432 Salinicola 0.00 1 1 S 1949083 Salinicola endophyticus 0.00 4 0 F 135620 Oceanospirillaceae 0.00 2 2 G 28253 Marinomonas 0.00 1 1 G 187492 Thalassolituus 0.00 1 0 G 459520 Neptuniibacter 0.00 1 1 S 651666 Neptuniibacter halophilus 0.00 5 0 O 135613 Chromatiales 0.00 5 0 F 1046 Chromatiaceae 0.00 2 2 G 85072 Allochromatium 0.00 1 1 G 1056 Thiocapsa 0.00 1 0 G 67575 Rheinheimera 0.00 1 0 G1 115860 unclassified Rheinheimera 0.00 1 1 S 1763998 Rheinheimera sp. F8 0.00 1 0 G 156885 Thioflavicoccus 0.00 1 0 S 80679 Thioflavicoccus mobilis 0.00 1 1 S1 765912 Thioflavicoccus mobilis 8321 0.00 3 0 O 135624 Aeromonadales 0.00 2 0 F 84642 Aeromonadaceae 0.00 2 0 G 642 Aeromonas 0.00 1 1 S 648 Aeromonas caviae 0.00 1 1 S 654 Aeromonas veronii 0.00 1 0 F 83763 Succinivibrionaceae 0.00 1 0 G 83770 Succinivibrio 0.00 1 1 S 83771 Succinivibrio dextrinosolvens 0.00 2 0 O 135618 Methylococcales 0.00 2 0 F 403 Methylococcaceae 0.00 1 0 G 413 Methylococcus 0.00 1 1 S 414 Methylococcus capsulatus 0.00 1 0 G 73778 Methylocaldum 0.00 1 1 S 1432792 Methylocaldum marinum 0.00 1 0 O 72273 Thiotrichales 0.00 1 0 F 2056687 Fastidiosibacteraceae 0.00 1 0 G 2056696 Cysteiniphilum 0.00 1 0 G1 2610889 unclassified Cysteiniphilum 0.00 1 1 S 2975055 Cysteiniphilum sp. QT6929 0.00 1 0 O 1706369 Cellvibrionales 0.00 1 0 F 1706375 Spongiibacteraceae 0.00 1 0 G 1084558 Oceanicoccus 0.00 1 1 S 716816 Oceanicoccus sagamiensis 0.00 1 0 O 118969 Legionellales 0.00 1 0 F 444 Legionellaceae 0.00 1 0 G 445 Legionella 0.00 1 0 S 96230 Legionella fallonii 0.00 1 1 S1 1212491 Legionella fallonii LLAP-10 2.15 2769 1 C 28211 Alphaproteobacteria 1.94 2498 918 O 766 Rickettsiales 1.22 1575 1 F 942 Anaplasmataceae 1.22 1573 0 F1 952 Wolbachieae 1.22 1573 1359 G 953 Wolbachia 0.15 193 38 G1 2640676 unclassified Wolbachia 0.05 69 69 S 3066194 Wolbachia endosymbiont (group A) of Anthophora plumipes 0.01 12 12 S 3066136 Wolbachia endosymbiont (group A) of Pogonocherus hispidulus 0.01 9 9 S 573241 Wolbachia endosymbiont of Oryzaephilus surinamensis 0.01 7 7 S 2953990 Wolbachia endosymbiont (group B) of Campaea margaritaria 0.01 7 7 S 3077922 Wolbachia endosymbiont (group A) of Ischnus inquisitorius 0.00 5 5 S 3066179 Wolbachia endosymbiont (group B) of Idaea biselata 0.00 5 5 S 2954056 Wolbachia endosymbiont (group A) of Sicus ferrugineus 0.00 4 4 S 3066174 Wolbachia endosymbiont (group A) of Ennomos erosarius 0.00 3 3 S 2916816 Wolbachia endosymbiont of Howardula sp. 0.00 3 3 S 2954012 Wolbachia endosymbiont (group B) of Eucosma cana 0.00 3 3 S 2742717 Wolbachia endosymbiont of Wiebesia pumilae 0.00 3 3 S 2953988 Wolbachia endosymbiont (group A) of Bombylius major 0.00 2 2 S 3066148 Wolbachia endosymbiont (group A) of Myopa testacea 0.00 2 2 S 2954021 Wolbachia endosymbiont (group B) of Ischnura elegans 0.00 2 2 S 3066159 Wolbachia endosymbiont (group B) of Gerris lacustris 0.00 2 2 S 3066130 Wolbachia endosymbiont (group A) of Agelastica alni 0.00 2 2 S 2954031 Wolbachia endosymbiont (group A) of Merzomyia westermanni 0.00 2 2 S 2954034 Wolbachia endosymbiont (group B) of Nymphalis c-album 0.00 2 2 S 3158571 Wolbachia endosymbiont of Armadillidium arcangelii 0.00 2 2 S 2954049 Wolbachia endosymbiont (group B) of Polyommatus icarus 0.00 2 2 S 163164 Wolbachia endosymbiont of Drosophila melanogaster 0.00 1 1 S 125593 Wolbachia endosymbiont of Trichogramma pretiosum 0.00 1 1 S 2953978 Wolbachia endosymbiont (group A) of Anomoia purmunda 0.00 1 1 S 3066154 Wolbachia endosymbiont (group A) of Pipizella viduata 0.00 1 1 S 2954051 Wolbachia endosymbiont (group B) of Protocalliphora azurea 0.00 1 1 S 246273 Wolbachia endosymbiont of Cimex lectularius 0.00 1 1 S 2954037 Wolbachia endosymbiont (group B) of Pammene fasciana 0.00 1 1 S 3066207 Wolbachia endosymbiont (group A) of Nomada goodeniana 0.01 17 17 S 955 Wolbachia pipientis 0.00 4 4 S 1845000 Candidatus Wolbachia massiliensis 0.00 1 1 G 33993 Neorickettsia 0.00 4 1 F 775 Rickettsiaceae 0.00 3 2 F1 33988 Rickettsieae 0.00 1 0 G 2601645 Candidatus Sneabacter 0.00 1 1 S 2601646 Candidatus Sneabacter namystus 0.00 1 0 F 1328881 Candidatus Midichloriaceae 0.00 1 0 G 411566 Candidatus Midichloria 0.00 1 0 S 234827 Candidatus Midichloria mitochondrii 0.00 1 1 S1 696127 Candidatus Midichloria mitochondrii IricVA 0.14 174 1 O 356 Hyphomicrobiales 0.09 119 9 F 41294 Nitrobacteraceae 0.09 110 0 G 374 Bradyrhizobium 0.09 110 0 G1 2631580 unclassified Bradyrhizobium 0.07 85 85 S 2590772 Bradyrhizobium sp. I71 0.02 25 25 S 2898442 Bradyrhizobium sp. 62B 0.02 32 1 F 82115 Rhizobiaceae 0.02 30 5 F1 227290 Rhizobium/Agrobacterium group 0.02 20 0 G 357 Agrobacterium 0.02 20 20 S 2792015 Agrobacterium leguminum 0.00 4 0 G 379 Rhizobium 0.00 3 0 S 384 Rhizobium leguminosarum 0.00 3 2 S1 386 Rhizobium leguminosarum bv. trifolii 0.00 1 1 S2 395492 Rhizobium leguminosarum bv. trifolii WSM2304 0.00 1 0 G1 2613769 unclassified Rhizobium 0.00 1 1 S 2775403 Rhizobium sp. TH2 0.00 1 0 G 1525371 Neorhizobium 0.00 1 0 S 399 Neorhizobium galegae 0.00 1 0 S1 323656 Neorhizobium galegae bv. officinalis 0.00 1 1 S2 1028801 Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 0.00 1 1 G 323620 Shinella 0.00 6 2 F 119045 Methylobacteriaceae 0.00 3 1 G 407 Methylobacterium 0.00 1 0 G1 2615210 unclassified Methylobacterium 0.00 1 1 S 2984843 Methylobacterium sp. FF17 0.00 1 1 S 570505 Methylobacterium bullatum 0.00 1 0 G 186650 Microvirga 0.00 1 0 G1 2617746 unclassified Microvirga 0.00 1 1 S 2807101 Microvirga sp. VF16 0.00 5 0 F 45401 Hyphomicrobiaceae 0.00 3 0 G 81 Hyphomicrobium 0.00 2 0 S 53399 Hyphomicrobium denitrificans 0.00 2 2 S1 670307 Hyphomicrobium denitrificans 1NES1 0.00 1 0 G1 2619925 unclassified Hyphomicrobium 0.00 1 1 S 2682968 Hyphomicrobium sp. ghe19 0.00 2 0 G 29407 Rhodoplanes 0.00 2 0 G1 2619116 unclassified Rhodoplanes 0.00 2 2 S 674703 Rhodoplanes sp. Z2-YC6860 0.00 3 0 F 2137278 Salinarimonadaceae 0.00 3 0 G 690086 Salinarimonas 0.00 3 0 G1 2646111 unclassified Salinarimonas 0.00 3 3 S 2766526 Salinarimonas sp. 0.00 2 0 F 2831100 Boseaceae 0.00 2 2 G 85413 Bosea 0.00 2 0 F 69277 Phyllobacteriaceae 0.00 2 0 G 68287 Mesorhizobium 0.00 1 1 S 39645 Mesorhizobium ciceri 0.00 1 0 G1 325217 unclassified Mesorhizobium 0.00 1 1 S 3074855 Mesorhizobium sp. WR6 0.00 2 0 O1 119042 Hyphomicrobiales incertae sedis 0.00 2 0 G 169055 Nordella 0.00 2 0 G1 2623691 unclassified Nordella 0.00 2 2 S 2712222 Nordella sp. HKS 07 0.00 1 0 F 31993 Methylocystaceae 0.00 1 0 G 133 Methylocystis 0.00 1 1 S 2885079 Methylocystis iwaonis 0.00 1 0 F 2831090 Blastochloridaceae 0.00 1 0 G 59282 Blastochloris 0.00 1 1 S 1079 Blastochloris viridis 0.02 31 1 O 204441 Rhodospirillales 0.01 16 1 F 433 Acetobacteraceae 0.01 10 0 G 434 Acetobacter 0.01 10 0 G1 151157 Acetobacter subgen. Acetobacter 0.01 10 10 S 435 Acetobacter aceti 0.00 2 2 G 1706033 Sediminicoccus 0.00 2 1 G 125216 Roseomonas 0.00 1 1 S 1750527 Roseomonas fluvialis 0.00 1 0 G 512381 Acidisoma 0.00 1 0 G1 2634065 unclassified Acidisoma 0.00 1 1 S 3040935 Acidisoma sp. PAMC 29798 0.01 14 0 F 2844601 Stellaceae 0.01 14 0 G 93 Stella 0.01 14 14 S 94 Stella humosa 0.02 27 1 O 204457 Sphingomonadales 0.02 25 0 F 41297 Sphingomonadaceae 0.01 18 15 G 13687 Sphingomonas 0.00 2 2 S 2681549 Sphingomonas profundi 0.00 1 1 S 298708 Sphingomonas kaistensis 0.00 2 0 G 1234545 Parasphingopyxis 0.00 2 2 S 2026624 Parasphingopyxis algicola 0.00 2 0 G 1434046 Sphingorhabdus 0.00 2 2 S 392610 Sphingorhabdus lacus 0.00 1 0 G 165695 Sphingobium 0.00 1 0 G1 2611147 unclassified Sphingobium 0.00 1 1 S 627192 Sphingobium sp. SYK-6 0.00 1 0 G 2676781 Aquisediminimonas 0.00 1 1 S 1550733 Aquisediminimonas profunda 0.00 1 0 G 1227948 Sphingomicrobium 0.00 1 1 S 1582356 Sphingomicrobium aestuariivivum 0.00 1 0 F 335929 Erythrobacteraceae 0.00 1 1 F1 2800788 Erythrobacter/Porphyrobacter group 0.01 18 2 O 204455 Rhodobacterales 0.01 14 4 F 31989 Paracoccaceae 0.01 8 6 G 265 Paracoccus 0.00 1 1 S 34004 Paracoccus aminovorans 0.00 1 0 G1 2688777 unclassified Paracoccus (in: a-proteobacteria) 0.00 1 1 S 3064531 Paracoccus sp. M09 0.00 1 0 G 204456 Gemmobacter 0.00 1 1 S 2840474 Gemmobacter fulvus 0.00 1 0 G 1097466 Defluviimonas 0.00 1 0 G1 2632198 unclassified Defluviimonas 0.00 1 1 S 3121287 Defluviimonas sp. SAOS-178_SWC 0.00 2 0 F 2854170 Roseobacteraceae 0.00 1 0 G 2433 Roseobacter 0.00 1 0 S 42443 Roseobacter litoralis 0.00 1 1 S1 391595 Roseobacter litoralis Och 149 0.00 1 0 G 1433986 Actibacterium 0.00 1 0 G1 2649852 unclassified Actibacterium 0.00 1 1 S 1609966 Actibacterium sp. EMB200-NS6 0.01 15 0 O 204458 Caulobacterales 0.01 15 0 F 76892 Caulobacteraceae 0.01 14 11 G 41275 Brevundimonas 0.00 1 0 G1 2622653 unclassified Brevundimonas 0.00 1 1 S 1938605 Brevundimonas sp. LM2 0.00 1 1 S 2774189 Brevundimonas pondensis 0.00 1 1 S 2800818 Brevundimonas vitisensis 0.00 1 1 G 76890 Asticcacaulis 0.00 5 0 O 54526 Candidatus Pelagibacterales 0.00 4 0 F 1655514 Candidatus Pelagibacteraceae 0.00 4 1 G 198251 Candidatus Pelagibacter 0.00 3 0 G1 2647897 unclassified Candidatus Pelagibacter 0.00 2 2 S 1388755 Candidatus Pelagibacter sp. HIMB1321 0.00 1 1 S 1977865 Candidatus Pelagibacter sp. RS40 0.00 1 0 O1 2813274 Candidatus Pelagibacterales incertae sedis 0.00 1 0 G 2045213 Candidatus Fonsibacter 0.00 1 1 S 1925548 Candidatus Fonsibacter ubiquis 0.83 1074 5 C 28216 Betaproteobacteria 0.55 705 5 O 32003 Nitrosomonadales 0.53 687 0 F 2008793 Sterolibacteriaceae 0.53 686 0 G 378210 Methyloversatilis 0.53 686 0 G1 2639971 unclassified Methyloversatilis 0.53 686 686 S 1842540 Methyloversatilis sp. RAC08 0.00 1 0 G 3050898 Sulfuricystis 0.00 1 1 S 2211108 Sulfuricystis multivorans 0.01 12 4 F 32011 Methylophilaceae 0.00 3 0 G 1679002 Candidatus Methylopumilus 0.00 3 3 S 1581680 Candidatus Methylopumilus turicensis 0.00 2 1 G 16 Methylophilus 0.00 1 1 S 17 Methylophilus methylotrophus 0.00 2 2 G 81682 Methylovorus 0.00 1 0 G 359407 Methylotenera 0.00 1 0 S 359408 Methylotenera mobilis 0.00 1 1 S1 583345 Methylotenera mobilis JLW8 0.00 1 0 F 206379 Nitrosomonadaceae 0.00 1 0 G 914 Nitrosomonas 0.00 1 0 G1 2609265 unclassified Nitrosomonas 0.00 1 1 S 261292 Nitrosomonas sp. Is79A3 0.26 333 1 O 80840 Burkholderiales 0.18 235 1 F 119060 Burkholderiaceae 0.14 175 13 G 106589 Cupriavidus 0.10 128 128 S 82633 Cupriavidus pauculus 0.03 34 34 S 164546 Cupriavidus taiwanensis 0.04 47 44 G 48736 Ralstonia 0.00 2 1 G1 3116862 Ralstonia solanacearum species complex 0.00 1 1 S 305 Ralstonia solanacearum 0.00 1 0 G1 209769 unclassified Ralstonia 0.00 1 1 S 2880989 Ralstonia sp. RS647 0.01 10 2 G 32008 Burkholderia 0.01 7 1 G1 87882 Burkholderia cepacia complex 0.00 3 3 S 152500 Burkholderia dolosa 0.00 2 2 S 60550 Burkholderia pyrrocinia 0.00 1 1 S 87883 Burkholderia multivorans 0.00 1 0 G1 111527 pseudomallei group 0.00 1 1 S 28450 Burkholderia pseudomallei 0.00 2 0 G 1822464 Paraburkholderia 0.00 1 0 G1 2615204 unclassified Paraburkholderia 0.00 1 1 S 3141544 Paraburkholderia sp. PREW-6R 0.00 1 1 S 1761016 Paraburkholderia caffeinilytica 0.03 37 7 F 995019 Sutterellaceae 0.02 27 0 G 1918598 Turicimonas 0.02 27 27 S 1796652 Turicimonas muris 0.00 3 0 G 40544 Sutterella 0.00 3 3 S 2494234 Sutterella megalosphaeroides 0.02 31 4 F 80864 Comamonadaceae 0.01 8 4 G 283 Comamonas 0.00 3 0 G1 2638500 unclassified Comamonas 0.00 3 3 S 2918299 Comamonas sp. B21-038 0.00 1 1 S 2743470 Comamonas antarctica 0.00 6 0 G 665874 Limnohabitans 0.00 6 0 G1 2626134 unclassified Limnohabitans 0.00 6 6 S 1678128 Limnohabitans sp. 63ED37-2 0.00 3 0 G 47420 Hydrogenophaga 0.00 3 3 G1 2610897 unclassified Hydrogenophaga 0.00 3 3 G 80865 Delftia 0.00 2 0 G 34072 Variovorax 0.00 2 2 G1 663243 unclassified Variovorax 0.00 2 0 G 1436289 Candidatus Symbiobacter 0.00 2 0 S 1436290 Candidatus Symbiobacter mobilis 0.00 2 2 S1 946483 Candidatus Symbiobacter mobilis CR 0.00 1 0 G 2678886 Pulveribacter 0.00 1 1 S 2116657 Pulveribacter suum 0.00 1 0 G 219181 Ottowia 0.00 1 0 G1 2645081 unclassified Ottowia 0.00 1 1 S 3081231 Ottowia sp. SB7-C50 0.00 1 1 G 238749 Diaphorobacter 0.02 20 0 F 506 Alcaligenaceae 0.00 5 4 G 507 Alcaligenes 0.00 1 1 S 511 Alcaligenes faecalis 0.00 5 0 G 1472344 Basilea 0.00 5 0 S 1472345 Basilea psittacipulmonis 0.00 5 5 S1 1072685 Basilea psittacipulmonis DSM 24701 0.00 4 0 G 517 Bordetella 0.00 4 4 S 520 Bordetella pertussis 0.00 4 3 G 222 Achromobacter 0.00 1 0 S 85698 Achromobacter xylosoxidans 0.00 1 1 S1 762376 Achromobacter xylosoxidans A8 0.00 1 0 G 152267 Pigmentiphaga 0.00 1 1 S 1940612 Pigmentiphaga aceris 0.00 1 0 G 359336 Castellaniella 0.00 1 0 G1 2617606 unclassified Castellaniella 0.00 1 1 S 3140381 Castellaniella sp. MT123 0.00 5 0 F 2975441 Sphaerotilaceae 0.00 4 0 G 93681 Roseateles 0.00 4 4 S 76731 Roseateles depolymerans 0.00 1 0 G 196013 Caldimonas 0.00 1 1 S 376175 Schlegelella aquatica 0.00 4 1 F 75682 Oxalobacteraceae 0.00 2 0 G 401469 Undibacterium 0.00 2 2 G1 2630295 unclassified Undibacterium 0.00 1 0 F1 2895353 Telluria group 0.00 1 1 G 149698 Massilia 0.02 27 0 O 206351 Neisseriales 0.02 25 7 F 481 Neisseriaceae 0.01 11 4 G 299568 Uruburuella 0.01 7 7 S 252130 Uruburuella suis 0.00 6 3 G 482 Neisseria 0.00 1 1 S 485 Neisseria gonorrhoeae 0.00 1 0 G1 2623750 unclassified Neisseria 0.00 1 1 S 2972775 Neisseria sp. Marseille-Q5346 0.00 1 1 S 1815583 Neisseria musculi 0.00 1 0 G 2593687 Aquella 0.00 1 1 S 2067065 Aquella oligotrophica 0.00 1 0 F 1499392 Chromobacteriaceae 0.00 1 0 G 400060 Paludibacterium 0.00 1 1 S 400061 Paludibacterium yongneupense 0.00 1 0 F 2897177 Chitinibacteraceae 0.00 1 0 G 240411 Chitinimonas 0.00 1 1 S 356302 Chitinimonas koreensis 0.00 4 0 O 206389 Rhodocyclales 0.00 2 2 F 2008795 Azonexaceae 0.00 2 0 F 2808923 Fluviibacteraceae 0.00 2 0 G 2808942 Fluviibacter 0.00 2 2 S 1751046 Fluviibacter phosphoraccumulans 0.00 1 0 C 1807140 Acidithiobacillia 0.00 1 0 O 225057 Acidithiobacillales 0.00 1 0 F 225058 Acidithiobacillaceae 0.00 1 1 G 119977 Acidithiobacillus 8.06 10380 21 D1 1783272 Terrabacteria group 7.37 9488 26 P 1239 Bacillota 5.82 7493 85 C 186801 Clostridia 3.38 4351 51 O 186802 Eubacteriales 2.83 3647 49 F 216572 Oscillospiraceae 2.09 2696 2082 G 216851 Faecalibacterium 0.46 592 592 S 853 Faecalibacterium prausnitzii 0.01 13 13 S 3030638 Faecalibacterium taiwanense 0.00 6 0 G1 2646395 unclassified Faecalibacterium 0.00 2 2 S 2929489 Faecalibacterium sp. IP-3-29 0.00 2 2 S 2929492 Faecalibacterium sp. I3-3-33 0.00 2 2 S 2929493 Faecalibacterium sp. I3-3-89 0.00 3 3 S 411483 Faecalibacterium duncaniae 0.35 449 160 G 292632 Subdoligranulum 0.22 284 284 S 214851 Subdoligranulum variabile 0.00 5 0 G1 512297 environmental samples 0.00 5 5 S 512298 uncultured Subdoligranulum sp. 0.07 89 2 G 1263 Ruminococcus 0.03 40 40 G1 2608920 unclassified Ruminococcus 0.03 35 35 S 1161942 Ruminococcus champanellensis 0.00 6 6 S 2564099 Ruminococcus bovis 0.00 3 3 S 1160721 Ruminococcus bicirculans (ex Wegman et al. 2014) 0.00 2 2 S 438033 Ruminococcus gauvreauii 0.00 1 0 S 1264 Ruminococcus albus 0.00 1 1 S1 697329 Ruminococcus albus 7 = DSM 20455 0.05 63 0 G 2842531 Solibaculum 0.05 63 63 S 2780922 Solibaculum mannosilyticum 0.04 47 0 G 946234 Flavonifractor 0.04 47 47 S 292800 Flavonifractor plautii 0.03 38 0 G 2172004 Lawsonibacter 0.03 38 38 S 2108523 Lawsonibacter asaccharolyticus 0.03 35 0 G 2038676 Paludihabitans 0.03 35 0 G1 2644543 unclassified Paludihabitans 0.03 35 35 S 3070656 Paludicola sp. MB14-C6 0.02 29 20 G 2892396 Vescimonas 0.00 5 5 S 2714353 Vescimonas fastidiosa 0.00 4 4 S 2714355 Vescimonas coprocola 0.02 27 0 G 2304687 Petroclostridium 0.02 27 0 G1 2619260 unclassified Petroclostridium 0.02 27 27 S 3045146 Petroclostridium sp. X23 0.02 26 0 G 253238 Ethanoligenens 0.02 26 26 S 253239 Ethanoligenens harbinense 0.02 26 0 G 459786 Oscillibacter 0.02 25 25 S 2763056 Oscillibacter hominis 0.00 1 0 G1 2629304 unclassified Oscillibacter 0.00 1 1 S 2109687 Oscillibacter sp. PEA192 0.02 21 2 G 2834348 Caproicibacterium 0.01 18 0 G1 2834349 unclassified Caproicibacterium 0.01 18 18 S 2994078 Caproicibacterium sp. BJN0003 0.00 1 1 S 2666138 Caproicibacterium lactatifermentans 0.01 16 0 G 1905344 Ruthenibacterium 0.01 16 16 S 1550024 Ruthenibacterium lactatiformans 0.01 14 0 G 35829 Acetivibrio 0.01 9 0 S 288965 Acetivibrio clariflavus 0.01 9 9 S1 720554 Acetivibrio clariflavus DSM 19732 0.00 3 3 S 1677857 Acetivibrio saccincola 0.00 2 2 S 1515 Acetivibrio thermocellus 0.01 8 0 G 2892397 Pusillibacter 0.01 8 8 S 2714358 Pusillibacter faecalis 0.01 7 0 G 244127 Anaerotruncus 0.01 7 7 S 169435 Anaerotruncus colihominis 0.00 3 0 G 236752 Fastidiosipila 0.00 3 3 S 236753 Fastidiosipila sanguinis 0.00 2 0 G 3048127 Thermocaproicibacter 0.00 2 2 S 2966552 Thermocaproicibacter melissae 0.00 1 0 G 1508657 Ruminiclostridium 0.00 1 1 S 2488810 Ruminiclostridium herbifermentans 0.00 1 0 G 3079925 Amygdalobacter 0.00 1 1 S 3029272 Amygdalobacter indicium 0.20 253 5 F 3082771 Acutalibacteraceae 0.19 243 0 G 1918385 Acutalibacter 0.19 243 243 S 1796620 Acutalibacter muris 0.00 5 5 G 1738645 Caproiciproducens 0.09 110 2 F 3085642 Butyricicoccaceae 0.08 107 0 G 1928820 Intestinibacillus 0.08 107 0 G1 2635293 unclassified Intestinibacillus 0.08 107 107 S 3079303 Intestinibacillus sp. NTUH-41-i26 0.00 1 0 G 2048137 Agathobaculum 0.00 1 0 G1 2620324 unclassified Agathobaculum 0.00 1 1 S 3079302 Agathobaculum sp. NTUH-O15-33 0.08 102 0 F 31979 Clostridiaceae 0.07 94 16 G 1485 Clostridium 0.01 16 16 S 182773 Clostridium isatidis 0.01 11 11 S 1561 Clostridium baratii 0.01 10 10 S 1504 Clostridium septicum 0.01 8 6 S 1502 Clostridium perfringens 0.00 2 2 S1 107819 Clostridium perfringens D 0.01 7 7 S 1529 Clostridium cadaveris 0.01 7 7 S 1716543 Clostridium thermarum 0.00 4 4 S 1520 Clostridium beijerinckii 0.00 4 4 S 84032 Clostridium thermosuccinogenes 0.00 3 3 S 1509 Clostridium sporogenes 0.00 3 0 G1 2614128 unclassified Clostridium 0.00 2 2 S 97138 Clostridium sp. MD294 0.00 1 1 S 411486 Clostridium sp. M62/1 0.00 2 2 S 94869 Clostridium gasigenes 0.00 2 2 S 46867 Clostridium chauvoei 0.00 1 1 S 1492 Clostridium butyricum 0.00 3 0 G 1266 Sarcina 0.00 3 0 G1 2619470 unclassified Sarcina 0.00 3 3 S 2726954 Sarcina sp. JB2 0.00 3 0 G 49082 Candidatus Arthromitus 0.00 3 3 G1 2638829 unclassified Candidatus Arthromitus 0.00 2 0 G 44258 Caloramator 0.00 2 0 G1 2629145 unclassified Caloramator 0.00 2 2 S 2576307 Caloramator sp. E03 0.05 69 0 O1 538999 Eubacteriales incertae sedis 0.04 49 0 G 1918454 Flintibacter 0.04 49 0 G1 2610894 unclassified Flintibacter 0.04 49 49 S 2610895 Flintibacter sp. KGMB00164 0.01 13 0 G 1392389 Intestinimonas 0.01 13 13 S 1297617 Intestinimonas butyriciproducens 0.00 4 0 G 2717089 Massilistercora 0.00 4 4 S 2086584 Massilistercora timonensis 0.00 3 0 F 543314 Eubacteriales Family XIII. Incertae Sedis 0.00 3 0 G 2886866 Sinanaerobacter 0.00 3 0 G1 2886867 unclassified Sinanaerobacter 0.00 3 3 S 3111540 Sinanaerobacter sp. ZZT-01 0.05 63 0 F 186807 Peptococcaceae 0.03 35 0 G 2840454 Candidatus Formimonas 0.03 35 35 S 1761012 Candidatus Formimonas warabiya 0.02 21 0 G 2282742 Desulfofarcimen 0.02 21 0 S 58138 Desulfofarcimen acetoxidans 0.02 21 21 S1 485916 Desulfofarcimen acetoxidans DSM 771 0.00 4 0 G 471826 Candidatus Desulforudis 0.00 4 4 S 471827 Candidatus Desulforudis audaxviator 0.00 2 0 G 2924872 Acididesulfobacillus 0.00 2 2 S 1561005 Acididesulfobacillus acetoxydans 0.00 1 1 G 2916693 Desulforamulus 0.02 32 0 F 186806 Eubacteriaceae 0.02 32 0 G 1730 Eubacterium 0.01 17 0 G1 2624479 unclassified Eubacterium (in: firmicutes) 0.01 17 17 S 2841528 Eubacterium sp. MSJ-33 0.01 14 14 S 39496 Eubacterium ventriosum 0.00 1 1 S 2041044 Eubacterium maltosivorans 0.01 13 0 F 3046368 Aristaeellaceae 0.01 13 5 G 3046369 Aristaeella 0.01 8 8 S 3046382 Aristaeella hokkaidonensis 0.01 7 0 F 31984 Heliobacteriaceae 0.00 4 0 G 79598 Heliorestis 0.00 4 4 S 356322 Heliorestis convoluta 0.00 3 0 G 2831443 Heliomicrobium 0.00 3 0 S 35701 Heliomicrobium modesticaldum 0.00 3 3 S1 498761 Heliomicrobium modesticaldum Ice1 0.00 4 0 F 2867375 Desulfallaceae 0.00 4 0 G 2867376 Desulfoscipio 0.00 4 0 S 102134 Desulfoscipio gibsoniae 0.00 4 4 S1 767817 Desulfoscipio gibsoniae DSM 7213 2.17 2799 4 O 3085636 Lachnospirales 2.13 2750 263 F 186803 Lachnospiraceae 0.25 325 14 G 207244 Anaerostipes 0.22 284 281 S 649756 Anaerostipes hadrus 0.00 3 3 S1 649757 Anaerostipes hadrus ATCC 29173 = JCM 17467 0.02 21 0 G1 2635253 unclassified Anaerostipes 0.02 21 21 S 3036926 Anaerostipes sp. PC18 0.00 4 4 S 1229621 Anaerostipes rhamnosivorans 0.00 2 2 S 105841 Anaerostipes caccae 0.24 313 248 G 2719231 Lacrimispora 0.02 30 0 G1 2719232 unclassified Lacrimispora 0.02 30 30 S 3151850 Lacrimispora sp. BS-2 0.02 22 22 S 29375 Lacrimispora xylanolytica 0.01 10 10 S 384636 Lacrimispora xylanisolvens 0.00 2 0 S 29370 Lacrimispora sphenoides 0.00 2 2 S1 1297793 Lacrimispora sphenoides JCM 1415 0.00 1 1 S 84030 Lacrimispora saccharolytica 0.23 299 226 G 841 Roseburia 0.04 52 52 S 301301 Roseburia hominis 0.01 19 0 G1 2637578 unclassified Roseburia 0.01 13 13 S 1261634 Roseburia sp. 499 0.00 6 6 S 1261635 Roseburia sp. 831b 0.00 2 2 S 166486 Roseburia intestinalis 0.19 249 168 G 572511 Blautia 0.04 57 0 S 40520 Blautia obeum 0.03 38 38 S1 657314 Blautia obeum A2-162 0.01 19 19 S1 411459 Blautia obeum ATCC 29174 0.01 11 0 G1 2648079 unclassified Blautia 0.01 11 11 S 2479767 Blautia sp. SC05B48 0.00 5 5 S 33035 Blautia producta 0.00 3 3 S 89014 Blautia luti 0.00 2 0 S 53443 Blautia hydrogenotrophica 0.00 2 2 S1 476272 Blautia hydrogenotrophica DSM 10507 0.00 1 1 S 1532 Blautia coccoides 0.00 1 1 S 1912897 Blautia argi 0.00 1 1 S 2779518 Blautia liquoris 0.15 198 2 G 1506553 Lachnoclostridium 0.08 109 109 S 29347 [Clostridium] scindens 0.06 75 75 S 1512 [Clostridium] symbiosum 0.01 8 0 S 66219 Lachnoclostridium phytofermentans 0.01 8 8 S1 357809 Lachnoclostridium phytofermentans ISDg 0.00 3 3 S 89153 [Clostridium] hylemonae 0.00 1 1 S 1871021 Lachnoclostridium phocaeense 0.11 148 0 G 248744 Marvinbryantia 0.11 148 0 S 168384 Marvinbryantia formatexigens 0.11 148 148 S1 478749 Marvinbryantia formatexigens DSM 14469 0.10 135 0 G 2163168 Kineothrix 0.10 135 1 G1 2625420 unclassified Kineothrix 0.07 89 89 S 3070215 Kineothrix sp. MB12-C1 0.03 45 45 S 3123317 Kineothrix sp. IPX-CK 0.08 104 24 G 2316020 Mediterraneibacter 0.03 40 40 S 33038 Mediterraneibacter gnavus 0.02 23 3 S 33039 [Ruminococcus] torques 0.02 20 20 S1 657313 [Ruminococcus] torques L2-14 0.01 17 0 S 46228 [Ruminococcus] lactaris 0.01 17 17 S1 471875 [Ruminococcus] lactaris ATCC 29176 0.07 93 0 G 2569097 Anaerobutyricum 0.07 93 93 S 39488 Anaerobutyricum hallii 0.07 89 0 G 189330 Dorea 0.05 62 62 S 39486 Dorea formicigenerans 0.02 27 27 S 88431 Dorea longicatena 0.06 77 3 G 1164882 Lachnoanaerobaculum 0.06 71 71 S 617123 Lachnoanaerobaculum umeaense 0.00 3 3 S 2490855 Lachnoanaerobaculum gingivalis 0.06 71 0 G 28050 Lachnospira 0.06 71 71 S 39485 Lachnospira eligens 0.04 51 0 G 2944193 Simiaoa 0.04 51 51 S 2763672 Simiaoa sunii 0.03 41 0 G 3076670 Claveliimonas 0.03 41 41 S 3028070 Claveliimonas bilis 0.03 40 0 G 1769710 Sellimonas 0.03 40 40 S 1653434 Sellimonas intestinalis 0.03 33 1 G 830 Butyrivibrio 0.02 26 26 S 45851 Butyrivibrio crossotus 0.00 3 3 S 831 Butyrivibrio fibrisolvens 0.00 2 2 S 185008 Butyrivibrio hungatei 0.00 1 0 S 43305 Butyrivibrio proteoclasticus 0.00 1 1 S1 515622 Butyrivibrio proteoclasticus B316 0.03 33 26 G 2719313 Enterocloster 0.00 6 6 S 208479 Enterocloster bolteae 0.00 1 0 S 333367 Enterocloster asparagiformis 0.00 1 1 S1 518636 [Clostridium] asparagiforme DSM 15981 0.02 32 20 G 1843210 Anaerocolumna 0.01 11 0 G1 2642604 unclassified Anaerocolumna 0.00 6 6 S 3081750 Anaerocolumna sp. AGMB13020 0.00 4 4 S 3039116 Anaerocolumna sp. AGMB13025 0.00 1 1 S 3070997 Anaerocolumna sp. MB42-C2 0.00 1 1 S 2696063 Anaerocolumna sedimenticola 0.02 25 0 G 1766253 Agathobacter 0.02 25 25 S 39491 Agathobacter rectalis 0.02 24 4 G 33042 Coprococcus 0.01 10 10 S 116085 Coprococcus catus 0.01 9 9 S 410072 Coprococcus comes 0.00 1 0 G1 2684943 unclassified Coprococcus 0.00 1 1 S 751585 Coprococcus sp. ART55/1 0.02 23 0 G 2944195 Qiania 0.02 23 23 S 2763669 Qiania dongpingensis 0.02 21 0 G 3031933 Chordicoccus 0.02 21 21 S 2709410 Chordicoccus furentiruminis 0.01 11 0 G 1213720 Stomatobaculum 0.01 11 0 G1 2643635 unclassified Stomatobaculum 0.01 11 11 S 3059030 Stomatobaculum sp. F0698 0.01 10 0 G 1649459 Hungatella 0.01 10 10 S 154046 Hungatella hathewayi 0.01 10 0 G 1663717 Herbinix 0.01 10 10 S 1679721 Herbinix luporum 0.01 9 0 G 1506577 Tyzzerella 0.01 9 9 S 36835 [Clostridium] colinum 0.00 6 0 G 3088373 Chakrabartyella 0.00 6 6 S 2918914 Chakrabartyella piscis 0.00 6 0 G 3024823 Anaeromicropila 0.00 6 6 S 2785025 Anaeromicropila herbilytica 0.00 5 0 G 2944152 Wujia 0.00 5 5 S 2763670 Wujia chipingensis 0.00 4 0 G 2997360 Anaeropeptidivorans 0.00 4 4 S 2934315 Anaeropeptidivorans aminofermentans 0.00 1 0 G 2888809 Novisyntrophococcus 0.00 1 1 S 2068655 Novisyntrophococcus fermenticellae 0.00 1 0 G 46205 Pseudobutyrivibrio 0.00 1 1 S 185007 Pseudobutyrivibrio xylanivorans 0.02 31 0 F 3118652 Anaerotignaceae 0.02 31 0 G 2039240 Anaerotignum 0.02 31 0 S 28446 Anaerotignum propionicum 0.02 31 31 S1 991789 Anaerotignum propionicum DSM 1682 0.01 13 0 F 2603322 Vallitaleaceae 0.01 13 0 G 2603323 Petrocella 0.01 13 13 S 2173034 Petrocella atlantisensis 0.00 1 0 F 1185407 Defluviitaleaceae 0.00 1 0 G 1185408 Defluviitalea 0.00 1 1 S 879970 Defluviitalea saccharophila 0.18 235 0 O 3082720 Peptostreptococcales 0.09 122 73 F 186804 Peptostreptococcaceae 0.03 33 25 G 1501226 Romboutsia 0.00 6 0 G1 2626894 unclassified Romboutsia 0.00 6 6 S 2708053 Romboutsia sp. 13368 0.00 2 2 S 1115758 Romboutsia ilealis 0.01 8 0 G 1870884 Clostridioides 0.01 8 8 S 1496 Clostridioides difficile 0.00 3 0 G 1505657 Intestinibacter 0.00 3 3 S 261299 Intestinibacter bartlettii 0.00 2 0 G 1257 Peptostreptococcus 0.00 2 2 S 3003601 Peptostreptococcus equinus 0.00 2 0 G 1505652 Terrisporobacter 0.00 2 2 S 1460447 Terrisporobacter petrolearius 0.00 1 0 G 1849822 Paraclostridium 0.00 1 1 S 1505 Paraclostridium sordellii 0.08 107 4 F 3030910 Anaerovoracaceae 0.06 79 0 G 1926556 Emergencia 0.06 78 0 G1 2642996 unclassified Emergencia 0.06 78 78 S 3114296 Emergencia sp. JLR.KK010 0.00 1 1 S 1776384 Emergencia timonensis 0.02 20 20 G 2060094 Aminipila 0.00 4 4 G 86331 Mogibacterium 0.00 4 0 F 3118656 Natronincolaceae 0.00 4 0 G 114627 Alkaliphilus 0.00 4 0 G1 2646756 unclassified Alkaliphilus 0.00 4 4 S 2731219 Alkaliphilus sp. B6464 0.00 2 0 F 3118655 Filifactoraceae 0.00 2 0 G 44259 Filifactor 0.00 2 0 S 143361 Filifactor alocis 0.00 2 2 S1 546269 Filifactor alocis ATCC 35896 0.01 16 0 O 3082768 Christensenellales 0.01 16 0 F 990719 Christensenellaceae 0.01 16 12 G 990721 Christensenella 0.00 4 4 S 626937 Christensenella minuta 0.00 3 0 O 3039167 Moorellales 0.00 3 0 F 3039168 Moorellaceae 0.00 3 0 G 44260 Moorella 0.00 3 3 S 676965 Moorella humiferrea 0.00 2 0 O 53433 Halanaerobiales 0.00 2 0 F 53434 Halobacteroidaceae 0.00 2 0 G 28186 Acetohalobium 0.00 2 0 S 28187 Acetohalobium arabaticum 0.00 2 2 S1 574087 Acetohalobium arabaticum DSM 5501 0.00 2 0 O 68295 Thermoanaerobacterales 0.00 2 0 F 186814 Thermoanaerobacteraceae 0.00 2 2 G 28895 Thermoanaerobacterium 0.86 1107 4 C 91061 Bacilli 0.61 784 18 O 1385 Bacillales 0.55 710 407 F 186817 Bacillaceae 0.14 176 5 G 1386 Bacillus 0.12 152 0 G1 653685 Bacillus subtilis group 0.11 142 0 G2 1938374 Bacillus amyloliquefaciens group 0.10 123 121 S 492670 Bacillus velezensis 0.00 2 2 S1 1385727 Bacillus velezensis NAU-B3 0.01 18 18 S 1390 Bacillus amyloliquefaciens 0.00 1 1 S 659243 Bacillus siamensis 0.01 9 6 S 1423 Bacillus subtilis 0.00 2 2 S1 86029 Bacillus subtilis subsp. natto 0.00 1 0 S1 135461 Bacillus subtilis subsp. subtilis 0.00 1 1 S2 1302650 Bacillus subtilis subsp. subtilis str. BAB-1 0.00 1 0 G2 653388 Bacillus mojavensis subgroup 0.00 1 1 S 260554 Bacillus halotolerans 0.01 12 1 G1 86661 Bacillus cereus group 0.00 3 0 S 1405 Bacillus mycoides 0.00 3 3 S1 315730 Bacillus mycoides KBAB4 0.00 3 3 S 1392 Bacillus anthracis 0.00 2 2 S 1396 Bacillus cereus 0.00 2 2 S 1428 Bacillus thuringiensis 0.00 1 0 G2 2750818 unclassified Bacillus cereus group 0.00 1 1 S 1892404 Bacillus sp. ABP14 0.00 4 0 G1 1792192 Bacillus altitudinis complex 0.00 4 4 S 293387 Bacillus altitudinis 0.00 2 2 S 561879 Bacillus safensis 0.00 1 0 G1 185979 unclassified Bacillus (in: firmicutes) 0.00 1 1 S 2841656 Bacillus sp. ZHX3 0.05 67 5 G 129337 Geobacillus 0.05 61 61 S 860353 Geobacillus proteiniphilus 0.00 1 0 G1 2642459 unclassified Geobacillus 0.00 1 1 S 1813182 Geobacillus sp. JS12 0.02 28 0 G 74385 Gracilibacillus 0.02 28 28 S 2663022 Gracilibacillus salitolerans 0.00 4 0 G 84406 Virgibacillus 0.00 4 0 G1 2620237 unclassified Virgibacillus 0.00 2 2 S 403957 Virgibacillus sp. SK37 0.00 2 2 S 2831673 Virgibacillus sp. NKC19-16 0.00 4 0 G 459532 Terribacillus 0.00 3 3 S 586416 Terribacillus aidingensis 0.00 1 1 S 361277 Terribacillus saccharophilus 0.00 3 0 G 2675232 Neobacillus 0.00 2 0 G1 2675272 unclassified Neobacillus 0.00 1 1 S 3070676 Neobacillus sp. PS2-9 0.00 1 1 S 3070683 Neobacillus sp. OS1-33 0.00 1 1 S 1740721 Neobacillus cucumis 0.00 3 0 G 200903 Paraliobacillus 0.00 3 3 S 2213194 Paraliobacillus zengyii 0.00 3 2 G 2837504 Heyndrickxia 0.00 1 1 S 1398 Heyndrickxia coagulans 0.00 3 1 G 400634 Lysinibacillus 0.00 2 2 S 2086577 Lysinibacillus timonensis 0.00 2 0 G 2675234 Alkalihalobacillus 0.00 2 0 G1 2675276 unclassified Alkalihalobacillus 0.00 2 2 S 2926399 Alkalihalobacillus sp. AL-G 0.00 2 0 G 2785518 Radiobacillus 0.00 2 2 S 2594883 Radiobacillus deserti 0.00 2 0 G 2837506 Niallia 0.00 1 1 S 1397 Niallia circulans 0.00 1 0 G1 2837522 unclassified Niallia 0.00 1 1 S 3082444 Niallia sp. XMNu-256 0.00 1 0 G 2893055 Halalkalibacterium (ex Joshi et al. 2022) 0.00 1 1 S 86665 Halalkalibacterium halodurans 0.00 1 0 G 2675230 Cytobacillus 0.00 1 1 S 665099 Cytobacillus oceanisediminis 0.00 1 1 G 2800373 Priestia 0.00 1 1 G 1906945 Parageobacillus 0.00 1 1 G 2893057 Shouchella 0.00 1 0 G 351195 Salimicrobium 0.00 1 0 G1 2619739 unclassified Salimicrobium 0.00 1 1 S 3095364 Salimicrobium sp. PL1-032A 0.03 34 0 F 90964 Staphylococcaceae 0.03 34 9 G 1279 Staphylococcus 0.01 14 14 S 1280 Staphylococcus aureus 0.00 6 6 S 70255 Staphylococcus condimenti 0.00 2 2 S 29388 Staphylococcus capitis 0.00 1 1 S 1282 Staphylococcus epidermidis 0.00 1 1 S 1290 Staphylococcus hominis 0.00 1 1 S 1293 Staphylococcus gallinarum 0.01 13 0 F 186818 Planococcaceae 0.01 8 7 G 1372 Planococcus 0.00 1 1 S 192421 Planococcus maritimus 0.00 2 0 G 651660 Paenisporosarcina 0.00 2 2 S 2320858 Paenisporosarcina cavernae 0.00 1 0 G 1569 Sporosarcina 0.00 1 1 S 298596 Sporosarcina ureilytica 0.00 1 0 G 160795 Ureibacillus 0.00 1 1 S 367743 Ureibacillus thermophilus 0.00 1 0 G 496496 Viridibacillus 0.00 1 0 G1 2617942 unclassified Viridibacillus 0.00 1 1 S 2779527 Viridibacillus sp. JNUCC-6 0.00 5 0 O1 539002 Bacillales incertae sedis 0.00 5 0 O2 539742 Bacillales Family XII. Incertae Sedis 0.00 5 5 G 33986 Exiguobacterium 0.00 2 0 F 539738 Gemellaceae 0.00 2 1 G 1378 Gemella 0.00 1 1 G1 2624949 unclassified Gemella 0.00 1 0 F 186822 Paenibacillaceae 0.00 1 0 G 44249 Paenibacillus 0.00 1 1 S 1464 Paenibacillus larvae 0.00 1 0 F 186824 Thermoactinomycetaceae 0.00 1 0 G 292635 Laceyella 0.00 1 1 S 37482 Laceyella sacchari 0.25 319 2 O 186826 Lactobacillales 0.14 175 2 F 33958 Lactobacillaceae 0.10 123 108 G 2767887 Ligilactobacillus 0.01 10 10 S 1624 Ligilactobacillus salivarius 0.00 3 0 S 1622 Ligilactobacillus murinus 0.00 3 3 S1 1235801 Ligilactobacillus murinus ASF361 0.00 1 1 S 1623 Ligilactobacillus ruminis 0.00 1 1 S 762833 Ligilactobacillus faecis 0.03 36 27 G 1578 Lactobacillus 0.00 4 4 S 147802 Lactobacillus iners 0.00 3 3 S 508451 Lactobacillus taiwanensis 0.00 1 1 G1 2620435 unclassified Lactobacillus 0.00 1 1 S 33959 Lactobacillus johnsonii 0.00 4 0 G 2742598 Limosilactobacillus 0.00 3 3 S 1598 Limosilactobacillus reuteri 0.00 1 1 S 97478 Limosilactobacillus mucosae 0.00 3 3 G 46255 Weissella 0.00 3 2 G 2767842 Lactiplantibacillus 0.00 1 1 S 1590 Lactiplantibacillus plantarum 0.00 2 0 G 2767881 Fructilactobacillus 0.00 2 2 S 1614 Fructilactobacillus fructivorans 0.00 1 0 G 46254 Oenococcus 0.00 1 0 S 336988 Oenococcus kitaharae 0.00 1 1 S1 1045004 Oenococcus kitaharae DSM 17330 0.00 1 0 G 2759736 Lacticaseibacillus 0.00 1 1 S 47715 Lacticaseibacillus rhamnosus 0.07 89 0 F 1300 Streptococcaceae 0.07 89 47 G 1301 Streptococcus 0.02 27 27 S 1346 Streptococcus iniae 0.00 5 5 S 1335 Streptococcus equinus 0.00 2 1 S 1308 Streptococcus thermophilus 0.00 1 1 S1 767463 Streptococcus thermophilus ND03 0.00 2 2 S 1311 Streptococcus agalactiae 0.00 2 2 S 1314 Streptococcus pyogenes 0.00 1 1 S 1307 Streptococcus suis 0.00 1 1 S 1310 Streptococcus sobrinus 0.00 1 1 S 1341 Streptococcus ratti 0.00 1 0 G1 671232 Streptococcus anginosus group 0.00 1 0 S 1338 Streptococcus intermedius 0.00 1 1 S1 862966 Streptococcus intermedius C270 0.02 27 0 F 81852 Enterococcaceae 0.02 27 4 G 1350 Enterococcus 0.02 23 22 S 1351 Enterococcus faecalis 0.00 1 1 S1 1201292 Enterococcus faecalis ATCC 29212 0.02 21 19 F 186828 Carnobacteriaceae 0.00 1 1 G 29393 Dolosigranulum 0.00 1 0 G 117563 Granulicatella 0.00 1 1 S 46124 Granulicatella adiacens 0.00 5 2 F 186827 Aerococcaceae 0.00 2 0 G 2862144 Ruoffia 0.00 2 2 S 87458 Ruoffia tabacinasalis 0.00 1 1 G 1375 Aerococcus 0.34 440 0 C 526524 Erysipelotrichia 0.34 440 0 O 526525 Erysipelotrichales 0.20 260 0 F 2810281 Turicibacteraceae 0.20 260 249 G 191303 Turicibacter 0.01 8 8 S 154288 Turicibacter sanguinis 0.00 3 0 G1 2638206 unclassified Turicibacter 0.00 3 3 S 3114695 Turicibacter sp. KK003 0.12 150 3 F 128827 Erysipelotrichaceae 0.06 76 0 G 1729679 Faecalibaculum 0.06 76 76 S 1702221 Faecalibaculum rodentium 0.04 52 1 G 174708 Allobaculum 0.03 34 0 G1 2623473 unclassified Allobaculum 0.03 34 34 S 2853432 Allobaculum sp. Allo2 0.01 17 17 S 2834459 Allobaculum mucilyticum 0.01 14 0 G 2749267 Amedibacterium 0.01 14 14 S 2583452 Amedibacterium intestinale 0.00 2 0 G 123375 Solobacterium 0.00 2 2 S 102148 Solobacterium moorei 0.00 1 0 G 1647 Erysipelothrix 0.00 1 1 S 1514105 Erysipelothrix larvae 0.00 1 0 G 1918536 Longicatena 0.00 1 1 S 1796635 Longicatena caecimuris 0.00 1 0 G 3059504 Allocoprobacillus 0.00 1 1 S 2944914 Allocoprobacillus halotolerans 0.02 30 0 F 2810280 Coprobacillaceae 0.01 13 0 G 2678885 Faecalibacillus 0.01 13 13 S 1982626 Faecalibacillus intestinalis 0.01 13 0 G 3025755 Thomasclavelia 0.01 9 0 G1 3025756 unclassified Thomasclavelia 0.01 9 9 S 1965571 Erysipelatoclostridium sp. An173 0.00 2 2 S 1547 Thomasclavelia ramosa 0.00 2 0 S 29348 Thomasclavelia spiroformis 0.00 2 2 S1 428126 Thomasclavelia spiroformis DSM 1552 0.00 4 0 G 135858 Catenibacterium 0.00 4 0 G1 2643636 unclassified Catenibacterium 0.00 4 4 S 2478954 Catenibacterium sp. co_0103 0.32 410 0 C 909932 Negativicutes 0.30 390 0 O 909929 Selenomonadales 0.30 388 0 F 1843491 Selenomonadaceae 0.30 384 8 G 158846 Megamonas 0.29 376 376 S 437897 Megamonas funiformis 0.00 4 0 G 970 Selenomonas 0.00 2 2 S 69823 Selenomonas sputigena 0.00 1 0 S 971 Selenomonas ruminantium 0.00 1 0 S1 114197 Selenomonas ruminantium subsp. lactilytica 0.00 1 1 S2 927704 Selenomonas ruminantium subsp. lactilytica TAM6421 0.00 1 1 G1 2637378 unclassified Selenomonas 0.00 2 0 F 1843490 Sporomusaceae 0.00 2 0 G 81463 Anaeromusa 0.00 2 0 G1 673272 environmental samples 0.00 2 2 S 673273 uncultured Anaeromusa sp. 0.01 18 0 O 1843489 Veillonellales 0.01 18 0 F 31977 Veillonellaceae 0.01 11 7 G 39948 Dialister 0.00 2 2 S 39950 Dialister pneumosintes 0.00 2 2 S 487173 Dialister succinatiphilus 0.00 4 0 G 29465 Veillonella 0.00 3 3 S 423477 Veillonella rogosae 0.00 1 1 S 29466 Veillonella parvula 0.00 3 0 G 906 Megasphaera 0.00 3 3 S 907 Megasphaera elsdenii 0.00 2 0 O 1843488 Acidaminococcales 0.00 2 0 F 909930 Acidaminococcaceae 0.00 2 1 G 33024 Phascolarctobacterium 0.00 1 1 S 33025 Phascolarctobacterium faecium 0.01 8 0 P1 84086 unclassified Bacillota 0.01 8 8 S 243899 endosymbiont 'TC1' of Trimyema compressum 0.00 4 0 C 1737404 Tissierellia 0.00 4 0 O 1737405 Tissierellales 0.00 4 0 F 1570339 Peptoniphilaceae 0.00 2 0 G 165779 Anaerococcus 0.00 2 2 S 1755241 Anaerococcus nagyae 0.00 1 0 G 31983 Helcococcus 0.00 1 1 S 72026 Helcococcus ovis 0.00 1 0 G 2126548 Miniphocaeibacter 0.00 1 1 S 2931922 Miniphocaeibacter halophilus 0.60 779 1 P 201174 Actinomycetota 0.54 694 4 C 1760 Actinomycetes 0.15 193 0 O 85009 Propionibacteriales 0.09 119 0 F 31957 Propionibacteriaceae 0.09 116 0 G 1912216 Cutibacterium 0.08 104 104 S 1747 Cutibacterium acnes 0.01 10 10 S 2559073 Cutibacterium modestum 0.00 2 2 S 33011 Cutibacterium granulosum 0.00 2 0 G 1912215 Acidipropionibacterium 0.00 2 2 S 1749 Acidipropionibacterium jensenii 0.00 1 0 G 29404 Microlunatus 0.00 1 0 G1 2619695 unclassified Microlunatus 0.00 1 1 S 2672569 Microlunatus sp. Gsoil 973 0.06 72 0 F 85015 Nocardioidaceae 0.06 71 7 G 1839 Nocardioides 0.05 60 60 S 2663857 Nocardioides marmotae 0.00 1 1 S 2558918 Nocardioides cynanchi 0.00 1 0 G1 2615069 unclassified Nocardioides 0.00 1 1 S 2763008 Nocardioides sp. zg-1228 0.00 1 1 S 449461 Nocardioides humi 0.00 1 1 S 2685869 Nocardioides ochotonae 0.00 1 0 G 116071 Micropruina 0.00 1 1 S 75385 Micropruina glycogenica 0.00 2 0 F 2726069 Kribbellaceae 0.00 2 0 G 182639 Kribbella 0.00 2 0 G1 2644121 unclassified Kribbella 0.00 1 1 S 2903578 Kribbella sp. NBC_01245 0.00 1 1 S 3160966 Kribbella sp. HUAS MG21 0.12 151 0 O 85007 Mycobacteriales 0.09 112 1 F 1762 Mycobacteriaceae 0.05 59 0 G 1866885 Mycolicibacterium 0.05 59 59 S 370524 Mycolicibacterium pallens 0.04 52 1 G 1763 Mycobacterium 0.04 49 0 G1 77643 Mycobacterium tuberculosis complex 0.04 49 49 S 78331 Mycobacterium canetti 0.00 2 0 G1 2642494 unclassified Mycobacterium 0.00 2 2 S 2099695 Mycobacterium sp. ITM-2016-00316 0.02 30 0 F 1653 Corynebacteriaceae 0.02 30 19 G 1716 Corynebacterium 0.00 4 0 G1 2624378 unclassified Corynebacterium 0.00 4 4 S 3017361 Corynebacterium sp. SCR221107 0.00 4 4 S 43768 Corynebacterium matruchotii 0.00 2 0 S 1718 Corynebacterium glutamicum 0.00 2 2 S1 1079988 Corynebacterium glutamicum ATCC 14067 0.00 1 1 S 146827 Corynebacterium simulans 0.00 4 0 F 85026 Gordoniaceae 0.00 4 0 G 2053 Gordonia 0.00 3 3 S 84595 Gordonia polyisoprenivorans 0.00 1 0 G1 2657482 unclassified Gordonia (in: high G+C Gram-positive bacteria) 0.00 1 1 S 2676309 Gordonia sp. 135 0.00 3 0 F 85025 Nocardiaceae 0.00 2 2 G 1817 Nocardia 0.00 1 0 G 1827 Rhodococcus 0.00 1 1 S 38310 Rhodococcus coprophilus 0.00 2 0 F 2805586 Lawsonellaceae 0.00 2 0 G 1847725 Lawsonella 0.00 2 2 S 1528099 Lawsonella clevelandensis 0.11 140 3 O 85006 Micrococcales 0.06 77 71 F 85023 Microbacteriaceae 0.00 3 0 G 33882 Microbacterium 0.00 2 2 S 370764 Microbacterium pygmaeum 0.00 1 0 G1 2609290 unclassified Microbacterium 0.00 1 1 S 3049072 Microbacterium sp. zg-Y818 0.00 2 0 G 55968 Leucobacter 0.00 2 2 S 2873270 Leucobacter tenebrionis 0.00 1 0 G 2034 Curtobacterium 0.00 1 0 G1 257496 unclassified Curtobacterium 0.00 1 1 S 2175655 Curtobacterium sp. MCPF17_052 0.03 45 19 F 1268 Micrococcaceae 0.01 11 11 G 1269 Micrococcus 0.01 8 0 G 32207 Rothia 0.01 8 8 S 43675 Rothia mucilaginosa 0.00 4 0 G 1742989 Glutamicibacter 0.00 4 4 S 1775880 Glutamicibacter mishrai 0.00 2 1 G 1663 Arthrobacter 0.00 1 0 G1 235627 unclassified Arthrobacter 0.00 1 1 S 1477518 Arthrobacter sp. D5-1 0.00 1 0 G 1868332 Neomicrococcus 0.00 1 1 S 556325 Neomicrococcus aestuarii 0.00 5 0 F 2805426 Kytococcaceae 0.00 5 0 G 57499 Kytococcus 0.00 5 5 S 1276 Kytococcus sedentarius 0.00 3 1 F 85020 Dermabacteraceae 0.00 2 1 G 43668 Brachybacterium 0.00 1 1 G1 2623841 unclassified Brachybacterium 0.00 2 0 F 85019 Brevibacteriaceae 0.00 2 0 G 1696 Brevibacterium 0.00 2 0 G1 2614124 unclassified Brevibacterium 0.00 1 1 S 2725563 Brevibacterium sp. 'Marine' 0.00 1 1 S 2999062 Brevibacterium sp. BRM-1 0.00 1 0 F 85017 Promicromonosporaceae 0.00 1 0 G 254250 Isoptericola 0.00 1 0 S 372663 Isoptericola dokdonensis 0.00 1 1 S1 1300344 Isoptericola dokdonensis DS-3 0.00 1 0 F 85018 Dermatophilaceae 0.00 1 0 G 1184606 Austwickia 0.00 1 1 S 100225 Austwickia chelonae 0.00 1 0 F 85021 Intrasporangiaceae 0.00 1 0 G 99479 Nostocoides 0.00 1 0 G1 2643346 unclassified Nostocoides 0.00 1 1 S 1813880 Nostocoides sp. HKS02 0.00 1 0 F 145358 Bogoriellaceae 0.00 1 0 G 154116 Georgenia 0.00 1 1 S 2585135 Georgenia wutianyii 0.00 1 0 F 1331736 Ruaniaceae 0.00 1 0 G 2828348 Occultella 0.00 1 1 S 2675754 Occultella kanbiaonis 0.07 93 0 O 85004 Bifidobacteriales 0.07 93 0 F 31953 Bifidobacteriaceae 0.07 92 60 G 1678 Bifidobacterium 0.01 15 14 S 216816 Bifidobacterium longum 0.00 1 1 S1 1679 Bifidobacterium longum subsp. longum 0.01 7 7 S 33905 Bifidobacterium thermophilum 0.00 6 0 S 1694 Bifidobacterium pseudolongum 0.00 6 6 S1 1447715 Bifidobacterium pseudolongum PV8-2 0.00 3 3 S 1689 Bifidobacterium dentium 0.00 1 1 S 1684 Bifidobacterium asteroides 0.00 1 1 G 2701 Gardnerella 0.07 85 0 O 85011 Kitasatosporales 0.07 85 2 F 2062 Streptomycetaceae 0.06 82 4 G 1883 Streptomyces 0.06 72 5 G1 2593676 unclassified Streptomyces 0.05 59 59 S 2933779 Streptomyces sp. WAC00303 0.00 2 2 S 1460244 Streptomyces sp. PCS3-D2 0.00 1 1 S 3002640 Streptomyces sp. 71268 0.00 1 1 S 2748873 Streptomyces sp. CB04723 0.00 1 1 S 3074430 Streptomyces sp. BB1-1-1 0.00 1 1 S 2975741 Streptomyces sp. NBC_00440 0.00 1 1 S 2975735 Streptomyces sp. NBC_00388 0.00 1 1 S 3041765 Streptomyces sp. SH5 0.00 2 2 S 1904616 Streptomyces fodineus 0.00 1 1 S 2768069 Streptomyces xanthii 0.00 1 1 S 2726118 Streptomyces argyrophyllae 0.00 1 1 S 83291 Streptomyces armeniacus 0.00 1 1 S 45398 Streptomyces griseoviridis 0.00 1 0 G 2995702 Actinacidiphila 0.00 1 1 S 1436133 Actinacidiphila bryophytorum 0.01 7 0 O 85010 Pseudonocardiales 0.01 7 1 F 2070 Pseudonocardiaceae 0.00 3 1 G 1847 Pseudonocardia 0.00 2 2 G1 2619320 unclassified Pseudonocardia 0.00 2 0 G 1813 Amycolatopsis 0.00 2 0 G1 2618356 unclassified Amycolatopsis 0.00 2 2 S 2653857 Amycolatopsis sp. YIM 10 0.00 1 0 G 674734 Alloactinosynnema 0.00 1 0 G1 2636053 unclassified Alloactinosynnema 0.00 1 1 S 1653480 Alloactinosynnema sp. L-07 0.00 5 0 O 1643682 Geodermatophilales 0.00 5 1 F 85030 Geodermatophilaceae 0.00 3 0 G 38501 Blastococcus 0.00 2 2 S 1564165 Blastococcus brunescens 0.00 1 0 G1 2619396 unclassified Blastococcus 0.00 1 1 S 3144843 Blastococcus sp. HT6-30 0.00 1 1 G 88138 Modestobacter 0.00 4 0 O 85008 Micromonosporales 0.00 4 1 F 28056 Micromonosporaceae 0.00 2 0 G 1865 Actinoplanes 0.00 1 0 S 1866 Actinoplanes missouriensis 0.00 1 1 S1 512565 Actinoplanes missouriensis 431 0.00 1 1 S 3040509 Actinoplanes oblitus 0.00 1 0 G 673534 Plantactinospora 0.00 1 1 G1 2631981 unclassified Plantactinospora 0.00 4 0 O 85012 Streptosporangiales 0.00 3 0 F 2012 Thermomonosporaceae 0.00 1 0 G 1988 Actinomadura 0.00 1 1 S 1993 Actinomadura madurae 0.00 1 0 G 2019 Thermomonospora 0.00 1 0 S 2020 Thermomonospora curvata 0.00 1 1 S1 471852 Thermomonospora curvata DSM 43183 0.00 1 0 G 667113 Actinoallomurus 0.00 1 0 G1 2624323 unclassified Actinoallomurus 0.00 1 1 S 2903557 Actinoallomurus sp. NBC_01490 0.00 1 0 F 2004 Streptosporangiaceae 0.00 1 0 G 2000 Streptosporangium 0.00 1 1 G1 2632669 unclassified Streptosporangium 0.00 4 0 O 2037 Actinomycetales 0.00 4 0 F 2049 Actinomycetaceae 0.00 2 0 G 2529408 Schaalia 0.00 2 2 S 52773 Schaalia meyeri 0.00 1 1 G 1654 Actinomyces 0.00 1 0 G 76833 Actinobaculum 0.00 1 0 G1 2609299 unclassified Actinobaculum 0.00 1 1 S 2495645 Actinobaculum sp. 313 0.00 3 0 O 2039638 Candidatus Nanopelagicales 0.00 3 0 F 2162846 Candidatus Nanopelagicaceae 0.00 3 3 G 622681 Candidatus Planktophila 0.00 1 0 O 85014 Glycomycetales 0.00 1 0 F 85034 Glycomycetaceae 0.00 1 0 G 283810 Stackebrandtia 0.00 1 0 S 283811 Stackebrandtia nassauensis 0.00 1 1 S1 446470 Stackebrandtia nassauensis DSM 44728 0.06 73 0 C 84998 Coriobacteriia 0.03 44 0 O 1643822 Eggerthellales 0.03 44 3 F 1643826 Eggerthellaceae 0.02 21 0 G 2981344 Xiamenia 0.02 21 21 S 2682776 Xiamenia xianingshaonis 0.01 15 12 G 447020 Adlercreutzia 0.00 3 3 S 446660 Adlercreutzia equolifaciens 0.00 2 0 G 84111 Eggerthella 0.00 2 2 S 84112 Eggerthella lenta 0.00 2 0 G 644652 Gordonibacter 0.00 2 0 S 471189 Gordonibacter pamelaeae 0.00 2 2 S1 657308 Gordonibacter pamelaeae 7-10-1-b 0.00 1 0 G 1981050 Phoenicibacter 0.00 1 1 S 1944646 Phoenicibacter congonensis 0.02 29 0 O 84999 Coriobacteriales 0.02 22 0 F 84107 Coriobacteriaceae 0.02 22 2 G 102106 Collinsella 0.01 16 16 S 74426 Collinsella aerofaciens 0.00 4 4 S 147206 Collinsella stercoris 0.00 6 0 F 3153719 Kribbibacteriaceae 0.00 6 0 G 2995122 Leptogranulimonas 0.00 6 6 S 2894156 Leptogranulimonas caecicola 0.00 1 0 F 1643824 Atopobiaceae 0.00 1 0 G 2767327 Fannyhessea 0.00 1 1 S 82135 Fannyhessea vaginae 0.01 7 1 C 1497346 Thermoleophilia 0.00 4 0 O 588674 Thermoleophilales 0.00 4 0 F 320796 Thermoleophilaceae 0.00 4 0 G 192992 Thermoleophilum 0.00 4 4 S 29539 Thermoleophilum album 0.00 2 0 O 588673 Solirubrobacterales 0.00 2 0 F 320583 Conexibacteraceae 0.00 2 0 G 191494 Conexibacter 0.00 2 0 S 191495 Conexibacter woesei 0.00 2 2 S1 469383 Conexibacter woesei DSM 14684 0.00 3 0 C 84992 Acidimicrobiia 0.00 3 0 O 84993 Acidimicrobiales 0.00 3 0 F 633392 Iamiaceae 0.00 2 0 G 3075137 Dermatobacter 0.00 2 2 S 2884263 Dermatobacter hominis 0.00 1 0 G 467975 Iamia 0.00 1 1 S 467976 Iamia majanohamensis 0.00 1 0 C 84995 Rubrobacteria 0.00 1 0 O 84996 Rubrobacterales 0.00 1 0 F 84997 Rubrobacteraceae 0.00 1 0 G 42255 Rubrobacter 0.00 1 1 S 2653852 Rubrobacter marinus 0.04 53 37 P 544448 Mycoplasmatota 0.01 10 0 O 2790996 Mycoplasmoidales 0.01 7 0 F 2895623 Metamycoplasmataceae 0.01 7 0 G 2767358 Mycoplasmopsis 0.00 5 5 S 33923 Mycoplasmopsis felis 0.00 2 2 S 2107 Mycoplasmopsis pulmonis 0.00 3 2 F 2790998 Mycoplasmoidaceae 0.00 1 0 G 2995234 Mycoplasmoides 0.00 1 1 S 92758 Mycoplasmoides fastidiosum 0.00 6 0 C 31969 Mollicutes 0.00 2 0 O 2085 Mycoplasmatales 0.00 2 0 F 2092 Mycoplasmataceae 0.00 2 1 G 2093 Mycoplasma 0.00 1 1 G1 2683645 unclassified Mycoplasma 0.00 2 0 O 186328 Entomoplasmatales 0.00 1 0 F 2131 Spiroplasmataceae 0.00 1 0 G 2132 Spiroplasma 0.00 1 0 S 2145 Spiroplasma taiwanense 0.00 1 1 S1 1276220 Spiroplasma taiwanense CT-1 0.00 1 0 F 33925 Entomoplasmataceae 0.00 1 0 G 46239 Mesoplasma 0.00 1 1 S 81459 Mesoplasma melaleucae 0.00 2 0 O 186329 Acholeplasmatales 0.00 2 1 F 2146 Acholeplasmataceae 0.00 1 0 G 2147 Acholeplasma 0.00 1 1 S 2148 Acholeplasma laidlawii 0.02 28 0 D2 1798711 Cyanobacteriota/Melainabacteria group 0.02 28 0 P 1117 Cyanobacteriota 0.02 28 0 C 3028117 Cyanophyceae 0.01 16 0 O 1161 Nostocales 0.01 14 0 F 1892263 Hapalosiphonaceae 0.01 14 0 G 1190 Fischerella 0.01 14 0 G1 494603 unclassified Fischerella 0.01 14 14 S 2597771 Fischerella sp. JS2 0.00 2 0 F 1162 Nostocaceae 0.00 2 0 G 1163 Anabaena 0.00 2 0 G1 2619674 unclassified Anabaena 0.00 2 2 S 2490939 Anabaena sp. YBS01 0.00 5 0 O 2881377 Pseudanabaenales 0.00 5 0 F 1890436 Pseudanabaenaceae 0.00 5 0 G 1152 Pseudanabaena 0.00 5 0 S 1112103 Pseudanabaena galeata 0.00 5 5 S1 2602720 Pseudanabaena galeata CCNP1313 0.00 2 0 O 3079744 Acaryochloridales 0.00 2 0 F 1890429 Acaryochloridaceae 0.00 2 0 G 155977 Acaryochloris 0.00 2 0 S 155978 Acaryochloris marina 0.00 2 2 S1 2762553 Acaryochloris marina S15 0.00 2 0 O 3079749 Leptolyngbyales 0.00 2 0 F 1890438 Leptolyngbyaceae 0.00 2 0 F1 3081713 Leptolyngbya group 0.00 2 0 G 47251 Leptolyngbya 0.00 2 0 G1 2650499 unclassified Leptolyngbya 0.00 2 2 S 2812896 Leptolyngbya sp. 7M 0.00 1 0 C1 1301283 Oscillatoriophycideae 0.00 1 0 O 1118 Chroococcales 0.00 1 0 F 1890450 Aphanothecaceae 0.00 1 0 G 263510 Crocosphaera 0.00 1 0 S 2546360 Crocosphaera subtropica 0.00 1 1 S1 43989 Crocosphaera subtropica ATCC 51142 0.00 1 1 O 1890424 Synechococcales 0.00 1 0 O 3039985 Nodosilineales 0.00 1 0 F 3039986 Nodosilineaceae 0.00 1 0 G 1120752 Nodosilinea 0.00 1 0 G1 2628167 unclassified Nodosilinea 0.00 1 1 S 3037479 Nodosilinea sp. E11 0.01 9 0 P 200795 Chloroflexota 0.00 6 0 C 301297 Dehalococcoidia 0.00 6 0 O 1202465 Dehalococcoidales 0.00 6 0 F 1202464 Dehalococcoidaceae 0.00 6 6 G 61434 Dehalococcoides 0.00 2 0 C 292625 Anaerolineae 0.00 2 0 O 292629 Anaerolineales 0.00 2 0 F 292628 Anaerolineaceae 0.00 2 0 G 2019482 Brevefilum 0.00 2 2 S 1986204 Brevefilum fermentans 0.00 1 0 C 475962 Caldilineae 0.00 1 0 O 475963 Caldilineales 0.00 1 0 F 475964 Caldilineaceae 0.00 1 0 G 233191 Caldilinea 0.00 1 0 S 133453 Caldilinea aerophila 0.00 1 1 S1 926550 Caldilinea aerophila DSM 14535 = NBRC 104270 0.00 1 0 P 1297 Deinococcota 0.00 1 0 C 188787 Deinococci 0.00 1 0 O 118964 Deinococcales 0.00 1 0 F 183710 Deinococcaceae 0.00 1 0 G 1298 Deinococcus 0.00 1 1 S 2737050 Deinococcus taeanensis 0.00 1 0 P 3027942 Thermomicrobiota 0.00 1 0 C 189775 Thermomicrobia 0.00 1 0 O 189776 Thermomicrobiales 0.00 1 0 F 189777 Thermomicrobiaceae 0.00 1 0 G 499 Thermomicrobium 0.00 1 0 S 500 Thermomicrobium roseum 0.00 1 1 S1 309801 Thermomicrobium roseum DSM 5159 2.19 2820 0 D1 1783270 FCB group 2.18 2808 0 D2 68336 Bacteroidota/Chlorobiota group 2.18 2808 3 P 976 Bacteroidota 2.03 2609 0 C 200643 Bacteroidia 2.03 2609 7 O 171549 Bacteroidales 0.95 1228 13 F 815 Bacteroidaceae 0.50 650 54 G 909656 Phocaeicola 0.44 570 570 S 821 Phocaeicola vulgatus 0.01 13 13 S 387090 Phocaeicola coprophilus 0.01 10 10 S 357276 Phocaeicola dorei 0.00 3 0 S 376805 Phocaeicola salanitronis 0.00 3 3 S1 667015 Phocaeicola salanitronis DSM 18170 0.44 565 114 G 816 Bacteroides 0.12 150 0 S 290053 Bacteroides helcogenes 0.12 150 150 S1 693979 Bacteroides helcogenes P 36-108 0.11 138 135 S 46506 Bacteroides stercoris 0.00 3 3 S1 449673 Bacteroides stercoris ATCC 43183 0.08 100 100 S 820 Bacteroides uniformis 0.02 23 23 S 28116 Bacteroides ovatus 0.01 12 12 S 47678 Bacteroides caccae 0.01 8 8 S 818 Bacteroides thetaiotaomicron 0.01 8 8 S 817 Bacteroides fragilis 0.00 4 0 G1 139043 environmental samples 0.00 4 4 S 162156 uncultured Bacteroides sp. 0.00 2 0 G1 2646097 unclassified Bacteroides 0.00 2 2 S 3117552 Bacteroides sp. MSB163 0.00 2 2 S 1796613 Bacteroides caecimuris 0.00 1 1 S 28113 Bacteroides heparinolyticus 0.00 1 1 S 28111 Bacteroides eggerthii 0.00 1 1 S 291644 Bacteroides salyersiae 0.00 1 1 S 329854 Bacteroides intestinalis 0.69 890 59 F 2005473 Muribaculaceae 0.27 352 9 G 2518495 Duncaniella 0.14 180 165 G1 2649562 unclassified Duncaniella 0.01 15 15 S 2576606 Duncaniella sp. B8 0.13 163 163 S 2518971 Duncaniella dubosii 0.20 259 36 G 1918540 Muribaculum 0.11 143 143 S 1796646 Muribaculum intestinale 0.06 80 80 S 2530390 Muribaculum gordoncarteri 0.16 201 0 G 2518497 Paramuribaculum 0.16 201 201 S 2094151 Paramuribaculum intestinale 0.01 19 0 G 2815786 Sodaliphilus 0.01 19 19 S 2606626 Sodaliphilus pleomorphus 0.15 193 0 F 171550 Rikenellaceae 0.10 129 15 G 239759 Alistipes 0.03 43 43 S 2585119 Alistipes dispar 0.03 38 38 S 2585118 Alistipes communis 0.02 22 22 S 1288121 Alistipes senegalensis 0.01 7 7 S 626932 Alistipes indistinctus 0.00 3 3 S 328813 Alistipes onderdonkii 0.00 1 0 G1 538948 environmental samples 0.00 1 1 S 538949 uncultured Alistipes sp. 0.05 64 0 G 1647173 Acetobacteroides 0.05 64 0 G1 1760810 environmental samples 0.05 64 64 S 1760811 uncultured Acetobacteroides sp. 0.10 129 0 F 2005525 Tannerellaceae 0.10 128 17 G 375288 Parabacteroides 0.05 60 59 S 46503 Parabacteroides merdae 0.00 1 1 S1 411477 Parabacteroides merdae ATCC 43184 0.03 42 42 S 1217282 Parabacteroides faecis 0.00 5 5 S 823 Parabacteroides distasonis 0.00 2 0 G1 2649774 unclassified Parabacteroides 0.00 2 2 S 2951805 Parabacteroides sp. AD58 0.00 1 1 S 328812 Parabacteroides goldsteinii 0.00 1 1 S 2685834 Parabacteroides chongii 0.00 1 0 G 195950 Tannerella 0.00 1 1 S 28112 Tannerella forsythia 0.09 113 6 F 171552 Prevotellaceae 0.05 63 15 G 838 Prevotella 0.02 27 0 G1 2638335 unclassified Prevotella 0.02 21 21 S 2691580 Prevotella sp. Rep29 0.00 3 0 S 652716 Prevotella sp. oral taxon 299 0.00 3 3 S1 575614 Prevotella sp. oral taxon 299 str. F0039 0.00 2 2 S 2937774 Prevotella sp. E15-22 0.00 1 1 S 2913621 Prevotella sp. E9-3 0.01 11 0 S 52227 Prevotella dentalis 0.01 11 11 S1 908937 Prevotella dentalis DSM 3688 0.01 7 7 S 28128 Prevotella corporis 0.00 3 3 S 28132 Prevotella melaninogenica 0.02 31 2 G 2974251 Segatella 0.02 25 14 S 165179 Segatella copri 0.01 11 11 S1 537011 Segatella copri DSM 18205 0.00 3 3 S 2518605 Segatella hominis 0.00 1 1 S 28135 Segatella oris 0.01 12 0 G 577309 Paraprevotella 0.01 12 12 S 454154 Paraprevotella clara 0.00 1 0 G 2884814 Pseudoprevotella 0.00 1 1 S 2133944 Pseudoprevotella muciniphila 0.03 34 0 F 1853231 Odoribacteraceae 0.02 31 0 G 283168 Odoribacter 0.02 31 31 S 28118 Odoribacter splanchnicus 0.00 3 0 G 574697 Butyricimonas 0.00 2 2 S 544645 Butyricimonas virosa 0.00 1 1 S 2093856 Butyricimonas faecalis 0.01 10 0 F 171551 Porphyromonadaceae 0.01 10 0 G 836 Porphyromonas 0.01 7 0 G1 2645799 unclassified Porphyromonas 0.01 7 7 S 712435 Porphyromonas sp. oral taxon 275 0.00 3 3 S 322095 Porphyromonas somerae 0.00 2 0 F 2005519 Barnesiellaceae 0.00 2 0 G 397864 Barnesiella 0.00 1 0 S 397865 Barnesiella viscericola 0.00 1 1 S1 880074 Barnesiella viscericola DSM 18177 0.00 1 0 G1 2645177 unclassified Barnesiella 0.00 1 1 S 1965590 Barnesiella sp. An22 0.00 2 1 F 2005520 Dysgonomonadaceae 0.00 1 0 G 294702 Proteiniphilum 0.00 1 1 S 2829812 Proteiniphilum propionicum 0.00 1 0 F 1970190 Salinivirgaceae 0.00 1 0 G 1970191 Salinivirga 0.00 1 1 S 1307839 Salinivirga cyanobacteriivorans 0.12 161 0 C 117743 Flavobacteriia 0.12 161 31 O 200644 Flavobacteriales 0.09 110 0 F 2762318 Weeksellaceae 0.09 110 0 F1 2782232 Chryseobacterium group 0.09 110 61 G 59732 Chryseobacterium 0.04 47 47 S 2929799 Chryseobacterium oryzae 0.00 1 1 S 2983606 Chryseobacterium fluminis 0.00 1 1 S 2759528 Chryseobacterium capnotolerans 0.02 20 0 F 49546 Flavobacteriaceae 0.01 9 0 G 237 Flavobacterium 0.00 6 0 G1 196869 unclassified Flavobacterium 0.00 4 4 S 2986827 Flavobacterium sp. N1994 0.00 2 2 S 2775246 Flavobacterium sp. CS20 0.00 2 2 S 1928857 Flavobacterium ovatum 0.00 1 1 S 2162713 Flavobacterium magnum 0.01 7 0 G 216431 Croceibacter 0.01 7 7 S 313588 Croceibacter atlanticus 0.00 2 0 G 2706948 Aureibaculum 0.00 2 2 S 2584122 Aureibaculum algae 0.00 1 1 G 444459 Flagellimonas 0.00 1 0 G 111500 Allomuricauda 0.00 1 0 G1 2615049 unclassified Allomuricauda 0.00 1 1 S 2908843 Muricauda sp. SCSIO 65647 0.02 27 0 C 768503 Cytophagia 0.02 27 0 O 768507 Cytophagales 0.02 22 0 F 89373 Cytophagaceae 0.01 19 0 G 107 Spirosoma 0.01 19 19 S 2666025 Spirosoma endbachense 0.00 3 0 G 978 Cytophaga 0.00 3 0 S 985 Cytophaga hutchinsonii 0.00 3 3 S1 269798 Cytophaga hutchinsonii ATCC 33406 0.00 2 0 F 563798 Cyclobacteriaceae 0.00 1 0 G 280472 Aquiflexum 0.00 1 0 S 280473 Aquiflexum balticum 0.00 1 1 S1 758820 Aquiflexum balticum DSM 16537 0.00 1 0 G 390846 Echinicola 0.00 1 1 S 1807691 Echinicola rosea 0.00 1 0 F 1853232 Hymenobacteraceae 0.00 1 0 G 323449 Pontibacter 0.00 1 0 G1 2648980 unclassified Pontibacter 0.00 1 1 S 3074898 Pontibacter sp. G13 0.00 1 0 F 2762286 Fulvivirgaceae 0.00 1 0 G 1433993 Chryseolinea 0.00 1 1 S 2321403 Chryseolinea soli 0.00 1 0 F 2896860 Spirosomataceae 0.00 1 0 G 105 Runella 0.00 1 0 S 106 Runella slithyformis 0.00 1 1 S1 761193 Runella slithyformis DSM 19594 0.00 6 0 C 117747 Sphingobacteriia 0.00 6 0 O 200666 Sphingobacteriales 0.00 6 0 F 84566 Sphingobacteriaceae 0.00 2 0 G 84567 Pedobacter 0.00 2 0 S 984 Pedobacter heparinus 0.00 2 2 S1 485917 Pedobacter heparinus DSM 2366 0.00 1 0 G 28453 Sphingobacterium 0.00 1 0 G1 2609468 unclassified Sphingobacterium 0.00 1 1 S 3058432 Sphingobacterium sp. BN32 0.00 1 0 G 376469 Olivibacter 0.00 1 0 G1 2632301 unclassified Olivibacter 0.00 1 1 S 2764720 Olivibacter sp. SDN3 0.00 1 1 G 423349 Mucilaginibacter 0.00 1 0 G 1649482 Pseudopedobacter 0.00 1 0 S 151895 Pseudopedobacter saltans 0.00 1 1 S1 762903 Pseudopedobacter saltans DSM 12145 0.00 2 0 C 1853228 Chitinophagia 0.00 2 0 O 1853229 Chitinophagales 0.00 2 0 F 563835 Chitinophagaceae 0.00 1 1 G 379899 Niabella 0.00 1 0 G 1860196 Pseudobacter 0.00 1 1 S 661488 Pseudobacter ginsenosidimutans 0.01 12 0 P 142182 Gemmatimonadota 0.01 12 0 C 219685 Gemmatimonadia 0.01 12 0 O 219686 Gemmatimonadales 0.01 12 0 F 219687 Gemmatimonadaceae 0.01 10 1 G 173479 Gemmatimonas 0.00 5 0 S 173480 Gemmatimonas aurantiaca 0.00 5 5 S1 379066 Gemmatimonas aurantiaca T-27 0.00 4 4 S 1379270 Gemmatimonas phototrophica 0.00 2 0 G 1706036 Gemmatirosa 0.00 2 2 S 861299 Gemmatirosa kalamazoonensis 1.19 1533 0 P 203691 Spirochaetota 1.19 1533 0 C 203692 Spirochaetia 1.19 1533 0 O 136 Spirochaetales 1.19 1528 0 F 2845253 Treponemataceae 1.19 1528 1525 G 157 Treponema 0.00 3 0 G1 2638727 unclassified Treponema 0.00 3 3 S 1539298 Treponema sp. OMZ 838 0.00 5 0 F 2791015 Sphaerochaetaceae 0.00 5 0 G 399320 Sphaerochaeta 0.00 5 0 G1 886477 environmental samples 0.00 5 5 S 886478 uncultured Sphaerochaeta sp. 0.07 96 0 P 200940 Thermodesulfobacteriota 0.07 88 0 C 3031449 Desulfovibrionia 0.07 88 0 O 213115 Desulfovibrionales 0.07 87 2 F 194924 Desulfovibrionaceae 0.04 51 12 G 872 Desulfovibrio 0.02 28 28 S 44742 Desulfovibrio fairfieldensis 0.01 11 11 S 1725232 Candidatus Desulfovibrio trichonymphae 0.02 26 0 G 3126915 Taurinivorans 0.02 26 26 S 2787751 Taurinivorans muris 0.01 7 0 G 2802295 Nitratidesulfovibrio 0.00 6 6 S 881 Nitratidesulfovibrio vulgaris 0.00 1 1 S 2604158 Nitratidesulfovibrio liaohensis 0.00 1 0 G 2950010 Salidesulfovibrio 0.00 1 1 S 2583823 Salidesulfovibrio onnuriiensis 0.00 1 0 F 213116 Desulfomicrobiaceae 0.00 1 1 G 898 Desulfomicrobium 0.00 4 0 C 3024418 Desulfobacteria 0.00 4 1 O 213118 Desulfobacterales 0.00 2 0 F 213119 Desulfobacteraceae 0.00 2 1 G 2289 Desulfobacter 0.00 1 0 G1 240138 environmental samples 0.00 1 1 S 240139 uncultured Desulfobacter sp. 0.00 1 0 F 3031622 Desulfolunaceae 0.00 1 0 G 497721 Desulfoluna 0.00 1 1 S 2810562 Desulfoluna limicola 0.00 2 0 C 3031451 Desulfobulbia 0.00 2 0 O 3024411 Desulfobulbales 0.00 2 0 F 213121 Desulfobulbaceae 0.00 2 0 G 2904609 Desulfogranum 0.00 2 2 S 453220 Desulfogranum marinum 0.00 2 0 C 3031651 Desulfuromonadia 0.00 1 0 O 69541 Desulfuromonadales 0.00 1 0 F 213421 Desulfuromonadaceae 0.00 1 1 G 890 Desulfuromonas 0.00 1 0 O 3031668 Geobacterales 0.00 1 0 F 213422 Geobacteraceae 0.00 1 0 G 28231 Geobacter 0.00 1 0 G1 2627627 unclassified Geobacter 0.00 1 1 S 2495594 Geobacter sp. SVR 0.03 35 0 D1 1783257 PVC group 0.02 30 0 P 74201 Verrucomicrobiota 0.02 29 0 C 203494 Verrucomicrobiia 0.02 28 0 O 48461 Verrucomicrobiales 0.02 27 0 F 1647988 Akkermansiaceae 0.02 27 8 G 239934 Akkermansia 0.01 19 19 S 239935 Akkermansia muciniphila 0.00 1 0 F 203557 Verrucomicrobiaceae 0.00 1 0 G 2735 Verrucomicrobium 0.00 1 0 G1 2625155 unclassified Verrucomicrobium 0.00 1 1 S 1882831 Verrucomicrobium sp. GAS474 0.00 1 0 O 134621 Limisphaerales 0.00 1 0 F 3050006 Fontisphaeraceae 0.00 1 0 G 3050007 Fontisphaera 0.00 1 1 S 2974023 Fontisphaera persica 0.00 1 0 C 414999 Opitutia 0.00 1 0 O 415000 Opitutales 0.00 1 0 F 134623 Opitutaceae 0.00 1 0 G 2028344 Ereboglobus 0.00 1 1 S 1796921 Ereboglobus luteus 0.00 5 0 P 203682 Planctomycetota 0.00 5 0 C 203683 Planctomycetia 0.00 2 0 O 2691355 Gemmatales 0.00 2 0 F 1914233 Gemmataceae 0.00 1 0 G 113 Gemmata 0.00 1 0 G1 2622970 unclassified Gemmata 0.00 1 1 S 1630693 Gemmata sp. SH-PL17 0.00 1 0 G 1382832 Telmatocola 0.00 1 1 S 1123043 Telmatocola sphagniphila 0.00 1 0 O 112 Planctomycetales 0.00 1 0 F 126 Planctomycetaceae 0.00 1 0 G 1649453 Gimesia 0.00 1 1 S 2527978 Gimesia panareensis 0.00 1 0 O 2691354 Pirellulales 0.00 1 0 F 2691359 Lacipirellulaceae 0.00 1 0 G 2691417 Lacipirellula 0.00 1 1 S 2650471 Lacipirellula parvula 0.00 1 0 O 2691356 Isosphaerales 0.00 1 0 F 1763524 Isosphaeraceae 0.00 1 0 G 1511635 Aquisphaera 0.00 1 1 S 406548 Aquisphaera giovannonii 0.01 14 0 P 32066 Fusobacteriota 0.01 14 0 C 203490 Fusobacteriia 0.01 14 0 O 203491 Fusobacteriales 0.01 11 1 F 203492 Fusobacteriaceae 0.01 7 0 G 180162 Cetobacterium 0.01 7 7 S 188913 Cetobacterium somerae 0.00 3 0 G 848 Fusobacterium 0.00 1 0 S 849 Fusobacterium gonidiaformans 0.00 1 1 S1 469615 Fusobacterium gonidiaformans ATCC 25563 0.00 1 0 S 850 Fusobacterium mortiferum 0.00 1 1 S1 469616 Fusobacterium mortiferum ATCC 9817 0.00 1 1 S 2764326 Fusobacterium hominis 0.00 3 0 F 1129771 Leptotrichiaceae 0.00 3 1 G 32067 Leptotrichia 0.00 2 0 G1 2633022 unclassified Leptotrichia 0.00 1 1 S 712357 Leptotrichia sp. oral taxon 212 0.00 1 1 S 712362 Leptotrichia sp. oral taxon 221 0.01 13 0 P 29547 Campylobacterota 0.01 13 0 C 3031852 Epsilonproteobacteria 0.01 13 0 O 213849 Campylobacterales 0.01 12 0 F 72293 Helicobacteraceae 0.01 12 4 G 209 Helicobacter 0.00 4 4 S 213 Helicobacter cinaedi 0.00 2 0 S 32025 Helicobacter hepaticus 0.00 2 2 S1 235279 Helicobacter hepaticus ATCC 51449 0.00 1 1 S 135569 Helicobacter apodemus 0.00 1 1 S 76936 Helicobacter typhlonius 0.00 1 0 F 72294 Campylobacteraceae 0.00 1 0 G 194 Campylobacter 0.00 1 1 G1 2593542 unclassified Campylobacter 0.01 8 0 D1 2323 Bacteria incertae sedis 0.01 8 0 D2 1783234 Bacteria candidate phyla 0.01 8 1 P 95818 Candidatus Saccharibacteria 0.01 7 0 C 2093818 Candidatus Saccharimonadia 0.00 6 0 O 2093825 Candidatus Saccharimonadales 0.00 6 0 F 2171986 Candidatus Saccharimonadaceae 0.00 6 0 G 1331051 Candidatus Saccharimonas 0.00 6 6 S 1332188 Candidatus Saccharimonas aalborgensis 0.00 1 0 O 2093819 Candidatus Nanosynbacterales 0.00 1 0 F 2093822 Candidatus Nanosynbacteraceae 0.00 1 0 G 2093823 Candidatus Nanosynbacter 0.00 1 1 S 2093824 Candidatus Nanosynbacter lyticus 0.00 6 0 P 57723 Acidobacteriota 0.00 4 0 C 204432 Terriglobia 0.00 3 0 O 332160 Bryobacterales 0.00 3 0 F 1962910 Bryobacteraceae 0.00 3 3 G 1649475 Paludibaculum 0.00 1 0 O 204433 Terriglobales 0.00 1 0 F 3121618 Candidatus Korobacteraceae 0.00 1 0 G 658061 Candidatus Korobacter 0.00 1 0 S 658062 Candidatus Korobacter versatilis 0.00 1 1 S1 204669 Candidatus Koribacter versatilis Ellin345 0.00 2 0 C 1813735 Vicinamibacteria 0.00 2 0 O 2910145 Vicinamibacterales 0.00 2 0 F 2211325 Vicinamibacteraceae 0.00 2 2 G 2004797 Luteitalea 0.00 3 0 P 2818505 Myxococcota 0.00 2 0 P1 3031711 Polyangia 0.00 2 0 O 3031712 Polyangiales 0.00 2 0 F 49 Polyangiaceae 0.00 2 0 G 55 Polyangium 0.00 2 2 S 2567896 Polyangium aurulentum 0.00 1 0 C 32015 Myxococcia 0.00 1 0 O 29 Myxococcales 0.00 1 0 O1 80811 Cystobacterineae 0.00 1 0 F 1524215 Anaeromyxobacteraceae 0.00 1 0 G 161492 Anaeromyxobacter 0.00 1 1 S 2918171 Anaeromyxobacter paludicola 0.00 3 0 P 40117 Nitrospirota 0.00 2 0 C 203693 Nitrospiria 0.00 2 0 O 189778 Nitrospirales 0.00 2 0 F 189779 Nitrospiraceae 0.00 2 0 G 179 Leptospirillum 0.00 2 0 G1 655606 Leptospirillum sp. Group I 0.00 2 0 S 180 Leptospirillum ferrooxidans 0.00 2 2 S1 1162668 Leptospirillum ferrooxidans C2-3 0.00 1 0 C 2811502 Thermodesulfovibrionia 0.00 1 0 O 2811503 Thermodesulfovibrionales 0.00 1 0 F 2811504 Thermodesulfovibrionaceae 0.00 1 0 G 28261 Thermodesulfovibrio 0.00 1 0 S 28262 Thermodesulfovibrio yellowstonii 0.00 1 1 S1 289376 Thermodesulfovibrio yellowstonii DSM 11347 0.00 2 0 P 200918 Thermotogota 0.00 2 0 C 188708 Thermotogae 0.00 2 0 O 1643947 Petrotogales 0.00 2 0 F 1643949 Petrotogaceae 0.00 1 0 G 1511648 Defluviitoga 0.00 1 1 S 1006576 Defluviitoga tunisiensis 0.00 1 0 G 2778400 Tepiditoga 0.00 1 1 S 2108365 Tepiditoga spiralis 0.00 2 0 P 200930 Deferribacterota 0.00 2 0 C 68337 Deferribacteres 0.00 2 0 O 191393 Deferribacterales 0.00 2 0 F 2945020 Mucispirillaceae 0.00 2 0 G 248038 Mucispirillum 0.00 2 0 S 248039 Mucispirillum schaedleri 0.00 2 2 S1 1379858 Mucispirillum schaedleri ASF457 0.00 1 0 P 508458 Synergistota 0.00 1 0 C 649775 Synergistia 0.00 1 0 O 649776 Synergistales 0.00 1 0 F 3029085 Aminithiophilaceae 0.00 1 0 G 3029078 Aminithiophilus 0.00 1 1 S 3029084 Aminithiophilus ramosus 0.01 7 0 D 2157 Archaea 0.01 7 0 P 28890 Euryarchaeota 0.00 5 0 C 183980 Archaeoglobi 0.00 5 0 O 2231 Archaeoglobales 0.00 5 0 F 2232 Archaeoglobaceae 0.00 5 0 G 2233 Archaeoglobus 0.00 5 0 S 58290 Archaeoglobus veneficus 0.00 5 5 S1 693661 Archaeoglobus veneficus SNP6 0.00 2 0 P1 2290931 Stenosarchaea group 0.00 2 0 C 183963 Halobacteria 0.00 2 0 O 2235 Halobacteriales 0.00 1 0 F 1644061 Natrialbaceae 0.00 1 0 G 88723 Natrinema 0.00 1 1 S 121872 Natrinema thermotolerans 0.00 1 0 F 1963268 Haloarculaceae 0.00 1 0 G 3056835 Halorarius 0.00 1 1 S 2962676 Halorarius litoreus 0.00 1 0 D 10239 Viruses 0.00 1 0 D1 2559587 Riboviria 0.00 1 0 K 2732396 Orthornavirae 0.00 1 0 P 2497569 Negarnaviricota 0.00 1 0 P1 2497571 Polyploviricotina 0.00 1 0 C 2497576 Ellioviricetes 0.00 1 0 O 1980410 Bunyavirales 0.00 1 0 F 1980415 Nairoviridae 0.00 1 0 G 1980517 Orthonairovirus 0.00 1 0 S 3052529 Orthonairovirus nairobiense 0.00 1 1 S1 194540 Nairobi sheep disease virus