SRR6014794 - Lasioglossum albipes

Basic Information

Run: SRR6014794

Assay Type: WGS

Bioproject: PRJNA402054

Biosample: SAMN07615183

Bytes: 89599336

Center Name: PRINCETON UNIVERSITY

Instrument: Illumina HiSeq 2000

Library Layout: PAIRED

Library Selection: RANDOM

Platform: ILLUMINA

Country: Switzerland

Continent: Europe

Location Name: Switzerland: Brassus

Latitude/Longitude: 46.635 N 6.267 E

Isolation: -

Biosample Model: Metagenome or environmental

Collection Date: 2014

About Potential Symbionts

This table shows potential symbiont identified in the metagenome sample. Matches are scored based on:

Note: only the three highest scoring comparison records were retained for each symbiont species or genus in the sample

Based on our current records database, this section aims to identify potential functional symbionts in this metagenome sample, with scoring based on:

Note: Showing top 3 highest scoring records for each species/genus

Symbiont Name	Record	Host Species	Function	Abundance	Score Score Composition: Symbiont Abundance Species match bonus Host match bonus Function richness Higher scores indicate stronger symbiotic relationship potential
Wolbachia pipientis Species-level Match Host Order Match	RISB2342	Nasonia giraulti Order: Hymenoptera	Increase mate acceptance of infected females	0.88%	16.8
Wolbachia pipientis Species-level Match Host Order Match	RISB0255	Camponotus pennalicus Order: Hymenoptera	None	0.88%	15.9
Pseudomonas Host Order Match	RISB0085	Osmia cornifrons Order: Hymenoptera	this bacterium has been shown to contribute to the synthesis of a defensive toxin in the beetle, Paederus fuscipes, and promotes arginine metabolism under in vitro conditions	0.06%	13.5
Pseudomonas Host Order Match	RISB2003	Trichogramma chilonis Order: Hymenoptera	could significantly increase both female count	0.06%	11.0
Wolbachia pipientis Species-level Match	RISB0766	Aedes fluviatilis Order: Diptera	The presence of Wolbachia pipientis improves energy performance in A. fluviatilis cells; it affects the regulation of key energy sources such as lipids, proteins, and carbohydrates, making the distribution of actin more peripheral and with extensions that come into contact with neighboring cells.	0.88%	10.9
Pseudomonas Host Order Match	RISB1564	Liometopum apiculatum Order: Hymenoptera	None	0.06%	10.1