SRR6014751 - Lasioglossum albipes

Basic Information

Run: SRR6014751

Assay Type: WGS

Bioproject: PRJNA402054

Biosample: SAMN07615239

Bytes: 108692488

Center Name: PRINCETON UNIVERSITY

Sequencing Information

Instrument: Illumina HiSeq 2000

Library Layout: PAIRED

Library Selection: RANDOM

Platform: ILLUMINA

Geographic Information

Country: France

Continent: Europe

Location Name: France: Rimont

Latitude/Longitude: 43.017 N 1.282 E

Sample Information

Host: Lasioglossum albipes

Isolation: -

Biosample Model: Metagenome or environmental

Collection Date: 2014

Taxonomic Classification

Potential Symbionts

About Potential Symbionts

This table shows potential symbiont identified in the metagenome sample. Matches are scored based on:

Relative abundance in the sample
Species-level matches with known symbionts
Host insect order matches with reference records
Completeness and richness of functional records

Note: only the three highest scoring comparison records were retained for each symbiont species or genus in the sample

Based on our current records database, this section aims to identify potential functional symbionts in this metagenome sample, with scoring based on:

Relative abundance in sample
Species-level matches with known symbionts
Host insect order matches
Functional record completeness

Note: Showing top 3 highest scoring records for each species/genus

Symbiont Name	Record	Host Species	Function	Abundance	Score Score Composition: Symbiont Abundance Species match bonus Host match bonus Function richness Higher scores indicate stronger symbiotic relationship potential
Wolbachia pipientis Species-level Match Host Order Match	RISB2342	Nasonia giraulti Order: Hymenoptera	Increase mate acceptance of infected females	2.68%	18.6
Wolbachia pipientis Species-level Match Host Order Match	RISB0255	Camponotus pennalicus Order: Hymenoptera	None	2.68%	17.7
Arsenophonus nasoniae Species-level Match Host Order Match	RISB0428	Nasonia vitripennis Order: Hymenoptera	male killing	0.01%	15.3
Arsenophonus nasoniae Species-level Match Host Order Match	RISB0366	Pachycrepoideus vindemmiae Order: Hymenoptera	None	0.01%	15.0
Oecophyllibacter saccharovorans Species-level Match Host Order Match	RISB1194	Oecophylla smaragdina Order: Hymenoptera	None	0.01%	15.0
Xanthomonas Host Order Match	RISB0498	Xylocopa appendiculata Order: Hymenoptera	Xanthomonas strain from Japanese carpenter bee is effective PU-degradable bacterium and is able to use polyacryl-based PU as a nutritional source, as well as other types of PS-PU and PE-PU	0.01%	13.8
Wolbachia pipientis Species-level Match	RISB0766	Aedes fluviatilis Order: Diptera	The presence of Wolbachia pipientis improves energy performance in A. fluviatilis cells; it affects the regulation of key energy sources such as lipids, proteins, and carbohydrates, making the distribution of actin more peripheral and with extensions that come into contact with neighboring cells.	2.68%	12.7
Xanthomonas Host Order Match	RISB0217	Xylocopa appendiculata Order: Hymenoptera	strains biodegraded polyethylene terephthalate PET powder, broke it into its degradation products	0.01%	12.0
Neokomagataea Host Order Match	RISB1560	Oecophylla smaragdina Order: Hymenoptera	may be related with the formic acid production	0.03%	11.0
Acinetobacter sp. ESL0695 Species-level Match	RISB0730	Curculio chinensis Order: Coleoptera	Acinetobacter sp. in C. chinensis enriched after treating with saponin, and when incubating bacteria with saponin for 72 h, saponin content significantly decreased from 4.054 to 1.867 mg/mL (by 16S rRNA metagenome sequencing and HPLC)	0.16%	9.8
Acinetobacter sp. ESL0695 Species-level Match	RISB1978	Blattella germanica Order: Blattodea	gut microbiota contributes to production of VCAs that act as fecal aggregation agents and that cockroaches discriminate among the complex odors that emanate from a diverse microbial community	0.16%	9.0
Sodalis praecaptivus Species-level Match	RISB0122	Nezara viridula Order: Hemiptera	plays an important role in interactions between insects and plants and could therefore be considered a valuable target for the development of sustainable pest control strategies.	0.04%	8.6
Candidatus Sodalis pierantonius Species-level Match	RISB2035	Sitophilus oryzae Order: Coleoptera	endosymbiont dynamics parallels numerous transcriptional changes in weevil developing adults and affects several biological processes, including metabolism and development	0.03%	8.5
Acinetobacter sp. ESL0695 Species-level Match	RISB1500	Lymantria dispar Order: Lepidoptera	Bacteria isolated from a host plant had a glycoside-degrading activity, which enhanced growth of the moth when larvae were fed on a toxin-containing diet	0.16%	8.2
Sodalis praecaptivus Species-level Match	RISB1718	Sitophilus zeamais Order: Coleoptera	we investigated the role of a quorum sensing（QS ） system in S. praecaptivus and found that it negatively regulates a potent insect-killing phenotype	0.04%	8.0
Serratia plymuthica Species-level Match	RISB1225	Delia antiqua Order: Diptera	six bacteria protect larvae from infection with the entomopathogen Beauveria bassiana through symbiotic bacterium-derived organic acids	0.02%	7.7
Serratia plymuthica Species-level Match	RISB1399	Delia antiqua Order: Diptera	suppressed Beauveria bassiana conidia germination and hyphal growth	0.02%	6.4
Rickettsia sp. MEAM1 (Bemisia tabaci) Species-level Match	RISB0704	Aphis craccivora Order: Hemiptera	facultative symbiont	0.01%	5.4
Serratia plymuthica Species-level Match	RISB0203	Belgica antarctica Order: Diptera	None	0.02%	5.0
Lactiplantibacillus	RISB1465	Drosophila melanogaster Order: Diptera	L. plantarum increases its growth-promotion ability by adapting to Drosophila diet	0.02%	1.7
Lactiplantibacillus	RISB0674	Drosophila melanogaster Order: Diptera	could effectively inhibit fungal spore germinations	0.02%	1.0
Lactiplantibacillus	RISB0608	Drosophila melanogaster Order: Diptera	None	0.02%	0.0