SRR5940703 - Musca domestica
Basic Information
Run: SRR5940703
Assay Type: WGS
Bioproject: PRJNA385554
Biosample: SAMN07135728
Bytes: 1963645538
Center Name: NANYANG TECHNOLOGICAL UNIVERSITY
Sequencing Information
Instrument: Illumina HiSeq 2500
Library Layout: PAIRED
Library Selection: RANDOM
Platform: ILLUMINA
Geographic Information
Country: Brazil
Continent: South America
Location Name: Brazil: Campinas
Latitude/Longitude: 22.8442 S 47.09639 W
Sample Information
Host: Musca domestica
Isolation: Food Market
Biosample Model: Metagenome or environmental
Collection Date: 2015-01-22
Taxonomic Classification
Potential Symbionts
About Potential Symbionts
This table shows potential symbiont identified in the metagenome sample. Matches are scored based on:
- Relative abundance in the sample
- Species-level matches with known symbionts
- Host insect order matches with reference records
- Completeness and richness of functional records
Based on our current records database, this section aims to identify potential functional symbionts in this metagenome sample, with scoring based on:
- Relative abundance in sample
- Species-level matches with known symbionts
- Host insect order matches
- Functional record completeness
Note: Showing top 3 highest scoring records for each species/genus
Symbiont Name | Record | Host Species | Function | Abundance |
Score
Score Composition:
Higher scores indicate stronger symbiotic relationship potential |
---|---|---|---|---|---|
Klebsiella oxytoca
Species-level Match
Host Order Match
Host Species Match
|
RISB1139 |
Musca domestica
Order: Diptera
|
It is associated to newly laid housefly eggs, where it is deposited by the female, and has a role in oviposition as well as protection against potential pathogens
|
0.14% |
38.4
|
Morganella morganii
Species-level Match
Host Order Match
|
RISB0772 |
Delia antiqua
Order: Diptera
|
showed significant volatile inhibition activity against fungal entomopathogen Fusarium moniliforme, Botryosphaeria dothidea and both Fusarium oxysporum respectively
|
4.95% |
23.2
|
Enterobacter asburiae
Species-level Match
Host Order Match
|
RISB1165 |
Bactrocera dorsalis
Order: Diptera
|
Promote the growth of larvae
|
7.38% |
22.9
|
Morganella morganii
Species-level Match
Host Order Match
|
RISB0008 |
Phormia regina
Order: Diptera
|
deterred oviposition by female stable flies; The flies' oviposition decisions appear to be guided by bacteria-derived semiochemicals as the bacteria
|
4.95% |
22.9
|
Klebsiella michiganensis
Species-level Match
Host Order Match
|
RISB1052 |
Bactrocera dorsalis
Order: Diptera
|
K. michiganensis BD177 has the strain-specific ability to provide three essential amino acids (phenylalanine, tryptophan and methionine) and two vitamins B (folate and riboflavin) to B. dorsalis
|
3.30% |
22.2
|
Citrobacter freundii
Species-level Match
Host Order Match
|
RISB1221 |
Delia antiqua
Order: Diptera
|
six bacteria protect larvae from infection with the entomopathogen Beauveria bassiana through symbiotic bacterium-derived organic acids
|
4.31% |
22.0
|
Morganella morganii
Species-level Match
Host Order Match
|
RISB0611 |
Bactrocera dorsalis
Order: Diptera
|
may hydrolysing nitrogenous waste and providing metabolizable nitrogen for B. dorsalis
|
4.95% |
21.7
|
Citrobacter sp. FDAARGOS_156
Species-level Match
Host Order Match
|
RISB1503 |
Bactrocera dorsalis
Order: Diptera
|
Pesticide-degrading bacteria were frequently detected from pesticide-resistant insects. Susceptible insects became resistant after inoculation of the pesticide-degrading symbiont
|
3.05% |
21.6
|
Citrobacter sp. Colony219
Species-level Match
Host Order Match
|
RISB1503 |
Bactrocera dorsalis
Order: Diptera
|
Pesticide-degrading bacteria were frequently detected from pesticide-resistant insects. Susceptible insects became resistant after inoculation of the pesticide-degrading symbiont
|
2.55% |
21.1
|
Klebsiella michiganensis
Species-level Match
Host Order Match
|
RISB1131 |
Bactrocera dorsalis
Order: Diptera
|
promotes host resistance to low-temperature stress by stimulating its arginine and proline metabolism pathway in adult Bactrocera dorsalis
|
3.30% |
21.1
|
Enterobacter sp. JBIWA008
Species-level Match
Host Order Match
|
RISB0893 |
Bactrocera dorsalis
Order: Diptera
|
be beneficial, with some quality control indices, such as adult size, pupal weight, survival rate under stress and nutritionally rich conditions, and mating competitiveness, being significantly increased, while slight nonsignificant increases in emergence rate and flight ability were observed
|
0.31% |
20.3
|
Lactococcus lactis
Species-level Match
Host Order Match
|
RISB0131 |
Ceratitis capitata
Order: Diptera
|
The intestinal microbiota structure was significantly influenced by the probiotic treatment while still maintaining a stable core dominant community of Enterobacteriacea. The colony with these microbiome had the most improved potential functions in terms of gut microbes as well as the carbohydrates active enzymes most improved potential functions.
|
0.19% |
20.2
|
Enterobacter sp. HK169
Species-level Match
Host Order Match
|
RISB0893 |
Bactrocera dorsalis
Order: Diptera
|
be beneficial, with some quality control indices, such as adult size, pupal weight, survival rate under stress and nutritionally rich conditions, and mating competitiveness, being significantly increased, while slight nonsignificant increases in emergence rate and flight ability were observed
|
0.14% |
20.1
|
Listeria monocytogenes
Species-level Match
Host Order Match
|
RISB2308 |
Drosophila melanogaster
Order: Diptera
|
L. monocytogenes infection disrupts host energy metabolism by depleting energy stores (triglycerides and glycogen) and reducing metabolic pathway activity (beta-oxidation and glycolysis). The infection affects antioxidant defense by reducing uric acid levels and alters amino acid metabolism. These metabolic changes are accompanied by melanization, potentially linked to decreased tyrosine levels.
|
0.05% |
20.1
|
Wolbachia
Host Order Match
|
RISB0766 |
Aedes fluviatilis
Order: Diptera
|
The presence of Wolbachia pipientis improves energy performance in A. fluviatilis cells; it affects the regulation of key energy sources such as lipids, proteins, and carbohydrates, making the distribution of actin more peripheral and with extensions that come into contact with neighboring cells.
|
5.02% |
20.0
|
Wolbachia
Host Order Match
|
RISB0779 |
Drosophila melanogaster
Order: Diptera
|
Wolbachia infection affects differential gene expression in Drosophila testis.Genes involved in carbohydrate metabolism, lysosomal degradation, proteolysis, lipid metabolism, and immune response were upregulated in the presence of Wolbachia
|
5.02% |
19.8
|
Wolbachia
Host Order Match
|
RISB1408 |
Anastrepha fraterculus
Order: Diptera
|
Wolbachia is the only known reproductive symbiont present in these morphotypes. Wolbachia reduced the ability for embryonic development in crosses involving cured females and infected males within each morphotype (uni-directional CI).
|
5.02% |
19.7
|
Serratia marcescens
Species-level Match
Host Order Match
|
RISB1291 |
Aedes aegypti
Order: Diptera
|
facilitates arboviral infection through a secreted protein named SmEnhancin, which digests membrane-bound mucins on the mosquito gut epithelia, thereby enhancing viral dissemination.
|
0.06% |
18.7
|
Acinetobacter guillouiae
Species-level Match
Host Order Match
|
RISB0768 |
Delia antiqua
Order: Diptera
|
showed significant volatile inhibition activity against fungal entomopathogen Fusarium moniliforme, Botryosphaeria dothidea and both Fusarium oxysporum respectively
|
0.02% |
18.3
|
Enterococcus casseliflavus
Species-level Match
Host Order Match
|
RISB0112 |
Bactrocera dorsalis
Order: Diptera
|
increase the resistance of B. dorsalis to β-cypermethrin by regulating cytochrome P450 (P450) enzymes and α-glutathione S-transferase (GST) activities
|
0.23% |
18.2
|
Lactococcus lactis
Species-level Match
Host Order Match
|
RISB0113 |
Bactrocera dorsalis
Order: Diptera
|
increase the resistance of B. dorsalis to β-cypermethrin by regulating cytochrome P450 (P450) enzymes and α-glutathione S-transferase (GST) activities
|
0.19% |
18.2
|
Stenotrophomonas maltophilia
Species-level Match
Host Order Match
|
RISB1227 |
Delia antiqua
Order: Diptera
|
six bacteria protect larvae from infection with the entomopathogen Beauveria bassiana through symbiotic bacterium-derived organic acids
|
0.29% |
18.0
|
Serratia marcescens
Species-level Match
Host Order Match
|
RISB0009 |
Phormia regina
Order: Diptera
|
prompted oviposition by flies; The flies' oviposition decisions appear to be guided by bacteria-derived semiochemicals as the bacteria
|
0.06% |
17.7
|
Enterococcus faecalis
Species-level Match
Host Order Match
|
RISB1411 |
Bactrocera dorsalis
Order: Diptera
|
female Bactrocera dorsalis fed Enterococcus faecalis and Klebsiella oxytoca enriched diets lived longer but had lower fecundity
|
0.09% |
17.6
|
Stenotrophomonas maltophilia
Species-level Match
Host Order Match
|
RISB1141 |
Hermetia illucens
Order: Diptera
|
enhance the insect growth performance when reared on an unbalanced nutritionally poor diet
|
0.29% |
17.1
|
Stenotrophomonas maltophilia
Species-level Match
Host Order Match
|
RISB1401 |
Delia antiqua
Order: Diptera
|
suppressed Beauveria bassiana conidia germination and hyphal growth
|
0.29% |
16.6
|
Lactiplantibacillus plantarum
Species-level Match
Host Order Match
|
RISB0674 |
Drosophila melanogaster
Order: Diptera
|
could effectively inhibit fungal spore germinations
|
0.20% |
16.2
|
Enterococcus faecalis
Species-level Match
Host Order Match
|
RISB0095 |
Bactrocera minax
Order: Diptera
|
egrade phenols in unripe citrus in B. minax larvae
|
0.09% |
16.1
|
Serratia marcescens
Species-level Match
Host Order Match
|
RISB0096 |
Bactrocera minax
Order: Diptera
|
egrade phenols in unripe citrus in B. minax larvae
|
0.06% |
16.1
|
Providencia rettgeri
Species-level Match
Host Order Match
|
RISB1001 |
Anastrepha obliqua
Order: Diptera
|
improve the sexual competitiveness of males
|
0.06% |
15.9
|
Bacillus thuringiensis
Species-level Match
Host Order Match
|
RISB0820 |
Simulium tani
Order: Diptera
|
show resistance to some antibiotics
|
0.19% |
15.9
|
Providencia sp. PROV188
Species-level Match
Host Order Match
|
RISB1574 |
Bactrocera tau
Order: Diptera
|
could attract male and female B. tau
|
0.07% |
15.8
|
Lactococcus lactis
Species-level Match
Host Order Match
|
RISB1167 |
Bactrocera dorsalis
Order: Diptera
|
Promote the growth of larvae
|
0.19% |
15.8
|
Myroides
Host Order Match
|
RISB0626 |
Musca altica
Order: Diptera
|
None
|
5.70% |
15.7
|
Acinetobacter sp. WCHA55
Species-level Match
Host Order Match
|
RISB2083 |
Aedes aegypti
Order: Diptera
|
axenic larvae cannot develop
|
0.13% |
15.7
|
Acinetobacter sp. NEB 394
Species-level Match
Host Order Match
|
RISB2083 |
Aedes aegypti
Order: Diptera
|
axenic larvae cannot develop
|
0.12% |
15.7
|
Providencia rettgeri
Species-level Match
Host Order Match
|
RISB1169 |
Bactrocera dorsalis
Order: Diptera
|
Promote the growth of larvae
|
0.06% |
15.6
|
Escherichia coli
Species-level Match
Host Order Match
|
RISB1769 |
Calliphoridae
Order: Diptera
|
None
|
0.50% |
15.5
|
Bacillus cereus
Species-level Match
Host Order Match
|
RISB1872 |
Aedes aegypti
Order: Diptera
|
gut microbiome
|
0.02% |
15.3
|
Lactiplantibacillus plantarum
Species-level Match
Host Order Match
|
RISB0608 |
Drosophila melanogaster
Order: Diptera
|
None
|
0.20% |
15.2
|
Pectobacterium carotovorum
Species-level Match
Host Order Match
|
RISB1772 |
Muscidae
Order: Diptera
|
None
|
0.20% |
15.2
|
Lactobacillus
Host Order Match
|
RISB1866 |
Drosophila melanogaster
Order: Diptera
|
The bacterial cells may thus be able to ameliorate the pH of the acidic region, by the release of weak bases.Additionally, the bacteria have a complex relationship with physiological processes which may affect ionic homeostasis in the gut, such as nutrition and immune function
|
0.14% |
15.1
|
Acetobacter
Host Order Match
|
RISB1865 |
Drosophila melanogaster
Order: Diptera
|
The bacterial cells may thus be able to ameliorate the pH of the acidic region, by the release of weak bases.Additionally, the bacteria have a complex relationship with physiological processes which may affect ionic homeostasis in the gut, such as nutrition and immune function
|
0.10% |
15.1
|
Buchnera aphidicola
Species-level Match
Host Order Match
|
RISB0051 |
Episyrphus balteatus
Order: Diptera
|
None
|
0.07% |
15.1
|
Bacillus cereus
Species-level Match
Host Order Match
|
RISB1701 |
Phlebotomus papatasi
Order: Diptera
|
None
|
0.02% |
15.0
|
Acetobacter
Host Order Match
|
RISB0961 |
Drosophila melanogaster
Order: Diptera
|
The exist of Acetobacter had a balancing effect on food ingestion when carbohydrate levels were high in the warmer months, stabilizing fitness components of flies across the year.
|
0.10% |
13.7
|
Leucobacter
Host Order Match
|
RISB0771 |
Delia antiqua
Order: Diptera
|
showed significant contact inhibition activity against fungal entomopathogen Fusarium moniliforme, Botryosphaeria dothidea and both Fusarium oxysporum respectively
|
0.03% |
13.3
|
Comamonas
Host Order Match
|
RISB2021 |
Bactrocera dorsalis
Order: Diptera
|
This group in the immature stages may be helping the insects to cope with oxidative stress by supplementing available oxygen.
|
0.08% |
12.6
|
Staphylococcus
Host Order Match
|
RISB0427 |
Anopheles sinensis
Order: Diptera
|
be identified in each part of the hyperendemic area of this study has a potential role to interact with malaria parasites.
|
0.07% |
12.5
|
Lactobacillus
Host Order Match
|
RISB0185 |
Drosophila melanogaster
Order: Diptera
|
enhancing the brain levels of tyrosine decarboxylase 2 (Tdc2), which is an enzyme that synthesizes octopamine (OA)
|
0.14% |
12.4
|
Acetobacter
Host Order Match
|
RISB0184 |
Drosophila melanogaster
Order: Diptera
|
enhancing the brain levels of tyrosine decarboxylase 2 (Tdc2), which is an enzyme that synthesizes octopamine (OA)
|
0.10% |
12.4
|
Gluconobacter
Host Order Match
|
RISB0016 |
Aedes aegypti
Order: Diptera
|
Gluconobacter might increase the susceptibility of Ae. aegypti to CHIKV infection.
|
0.04% |
11.7
|
Lactobacillus
Host Order Match
|
RISB1714 |
Drosophila melanogaster
Order: Diptera
|
It has the potential to reduce IMI-induced susceptibility to infection.
|
0.14% |
11.6
|
Dysgonomonas
Host Order Match
|
RISB1235 |
Hermetia illucens
Order: Diptera
|
provides the tools for degrading of a broad range of substrates
|
0.21% |
11.5
|
Gluconobacter
Host Order Match
|
RISB1882 |
Drosophila suzukii
Order: Diptera
|
produce volatile substances that attract female D. suzukii
|
0.04% |
11.2
|
Komagataeibacter
Host Order Match
|
RISB1883 |
Drosophila suzukii
Order: Diptera
|
produce volatile substances that attract female D. suzukii
|
0.02% |
11.2
|
Raoultella
Host Order Match
|
RISB1575 |
Bactrocera tau
Order: Diptera
|
could attract male and female B. tau
|
0.03% |
10.8
|
Chryseobacterium
Host Order Match
|
RISB2092 |
Aedes aegypti
Order: Diptera
|
axenic larvae cannot develop
|
0.13% |
10.7
|
Chryseobacterium
Host Order Match
|
RISB1874 |
Aedes aegypti
Order: Diptera
|
gut microbiome
|
0.13% |
10.4
|
Comamonas
Host Order Match
|
RISB1875 |
Aedes aegypti
Order: Diptera
|
gut microbiome
|
0.08% |
10.4
|
Staphylococcus
Host Order Match
|
RISB1881 |
Aedes aegypti
Order: Diptera
|
gut microbiome
|
0.07% |
10.4
|
Leucobacter
Host Order Match
|
RISB1876 |
Aedes aegypti
Order: Diptera
|
gut microbiome
|
0.03% |
10.3
|
Achromobacter
Host Order Match
|
RISB1869 |
Aedes aegypti
Order: Diptera
|
gut microbiome
|
0.03% |
10.3
|
Alcaligenes
Host Order Match
|
RISB1871 |
Aedes aegypti
Order: Diptera
|
gut microbiome
|
0.03% |
10.3
|
Vagococcus
Host Order Match
|
RISB0042 |
Aldrichina grahami
Order: Diptera
|
None
|
0.24% |
10.2
|
Chryseobacterium
Host Order Match
|
RISB0015 |
Aedes aegypti
Order: Diptera
|
None
|
0.13% |
10.1
|
Comamonas
Host Order Match
|
RISB2020 |
Bactrocera dorsalis
Order: Diptera
|
None
|
0.08% |
10.1
|
Buchnera aphidicola
Species-level Match
|
RISB0236 |
Acyrthosiphon pisum
Order: Hemiptera
|
Buchnera the nutritional endosymbiont of A. pisum is located inside of bacteriocytes and requires aspartate from the aphid host, because it cannot make it de novo. Further Buchnera needs aspartate for the biosynthesis of the essential amino acids lysine and threonine, which the aphid and Buchnera require for survival
|
0.07% |
10.1
|
Gluconobacter
Host Order Match
|
RISB0876 |
Drosophila suzukii
Order: Diptera
|
None
|
0.04% |
10.0
|
Pseudomonas sp. ABC1
Species-level Match
|
RISB1622 |
Dendroctonus valens
Order: Coleoptera
|
volatiles from predominant bacteria regulate the consumption sequence of carbon sources d-pinitol and d-glucose in the fungal symbiont Leptographium procerum, and appear to alleviate the antagonistic effect from the fungus against RTB larvae
|
0.21% |
10.0
|
Pseudomonas sp. CIP-10
Species-level Match
|
RISB1622 |
Dendroctonus valens
Order: Coleoptera
|
volatiles from predominant bacteria regulate the consumption sequence of carbon sources d-pinitol and d-glucose in the fungal symbiont Leptographium procerum, and appear to alleviate the antagonistic effect from the fungus against RTB larvae
|
0.11% |
9.9
|
Buchnera aphidicola
Species-level Match
|
RISB2485 |
Macrosiphum euphorbiae
Order: Hemiptera
|
symbiont expression patterns differ between aphid clones with differing levels of virulence, and are influenced by the aphids' host plant. Potentially, symbionts may contribute to differential adaptation of aphids to host plant resistance
|
0.07% |
9.8
|
Escherichia coli
Species-level Match
|
RISB1339 |
Manduca sexta
Order: Lepidoptera
|
modulate immunity-related gene expression in the infected F0 larvae, and also in their offspring, triggered immune responses in the infected host associated with shifts in both DNA methylation and histone acetylation
|
0.50% |
9.8
|
Streptomyces sp. NBC_01324
Species-level Match
|
RISB0943 |
Polybia plebeja
Order: Hymenoptera
|
this bacterium produces antimicrobial compounds that are active against Hirsutella citriformis, a natural fungal enemy of its host, and the human pathogens Staphylococcus aureus and Candida albicans
|
0.44% |
9.4
|
Clostridium sp. DL-VIII
Species-level Match
|
RISB2301 |
Pyrrhocoris apterus
Order: Hemiptera
|
could play an important role for the insect by degrading complex dietary components, providing nutrient supplementation, or detoxifying noxious chemicals (e.g. cyclopropenoic fatty acids or gossypol) in the diet
|
0.03% |
9.3
|
Clostridium sp. BNL1100
Species-level Match
|
RISB2301 |
Pyrrhocoris apterus
Order: Hemiptera
|
could play an important role for the insect by degrading complex dietary components, providing nutrient supplementation, or detoxifying noxious chemicals (e.g. cyclopropenoic fatty acids or gossypol) in the diet
|
0.02% |
9.2
|
Streptomyces sp. T12
Species-level Match
|
RISB0943 |
Polybia plebeja
Order: Hymenoptera
|
this bacterium produces antimicrobial compounds that are active against Hirsutella citriformis, a natural fungal enemy of its host, and the human pathogens Staphylococcus aureus and Candida albicans
|
0.25% |
9.2
|
Streptomyces sp. NBC_01324
Species-level Match
|
RISB2334 |
Sirex noctilio
Order: Hymenoptera
|
degrading woody substrates and that such degradation may assist in nutrient acquisition by S. noctilio, thus contributing to its ability to be established in forested habitats worldwide
|
0.44% |
9.1
|
Pseudomonas monteilii
Species-level Match
|
RISB1981 |
Blattella germanica
Order: Blattodea
|
gut microbiota contributes to production of VCAs that act as fecal aggregation agents and that cockroaches discriminate among the complex odors that emanate from a diverse microbial community
|
0.13% |
9.0
|
Weissella cibaria
Species-level Match
|
RISB1982 |
Blattella germanica
Order: Blattodea
|
gut microbiota contributes to production of VCAs that act as fecal aggregation agents and that cockroaches discriminate among the complex odors that emanate from a diverse microbial community
|
0.08% |
8.9
|
Escherichia coli
Species-level Match
|
RISB0128 |
Tribolium castaneum
Order: Coleoptera
|
may produce 4,8-dimethyldecanal (DMD) production that is strongly associated with attraction to females and host pheromone communication
|
0.50% |
8.2
|
Blattabacterium cuenoti
Species-level Match
|
RISB0133 |
Panesthiinae
Order: Blattodea
|
enables hosts to subsist on a nutrient-poor diet; endosymbiont genome erosions are associated with repeated host transitions to an underground life
|
0.03% |
8.0
|
Weissella cibaria
Species-level Match
|
RISB0641 |
Formica
Order: Hymenoptera
|
exhibited abilities in catabolizing sugars (sucrose, trehalose, melezitose and raffinose) known to be constituents of hemipteran honeydew
|
0.08% |
7.8
|
Proteus vulgaris
Species-level Match
|
RISB0001 |
Leptinotarsa decemlineata
Order: Coleoptera
|
produces toxic hydrogen cyanide (HCN) and a mandelonitrile-producing cyanoglucoside, amygdalin, which protect the insect from predation
|
0.08% |
7.8
|
Leclercia adecarboxylata
Species-level Match
|
RISB1757 |
Spodoptera frugiperda
Order: Lepidoptera
|
degradation of lambda-cyhalothrin, deltamethrin, chlorpyrifos ethyl, lufenuron and spinosyn
|
0.03% |
6.9
|
Corynebacterium variabile
Species-level Match
|
RISB0363 |
Pagiophloeus tsushimanus
Order: Coleoptera
|
terpenoid-degrading: the highest degradation rates of D-camphor, linalool, and eucalyptol
|
0.01% |
6.8
|
Kosakonia sp. CCTCC M2018092
Species-level Match
|
RISB0810 |
Hypothenemus hampei
Order: Coleoptera
|
might contribute to caffeine breakdown using the C-16 oxidation pathway
|
0.02% |
6.4
|
Leclercia adecarboxylata
Species-level Match
|
RISB1758 |
Spodoptera frugiperda
Order: Lepidoptera
|
may influence the metabolization of pesticides in insects
|
0.03% |
6.2
|
Proteus vulgaris
Species-level Match
|
RISB2460 |
Bombyx mori
Order: Lepidoptera
|
degradation of cellulose, xylan, pectin and starch
|
0.08% |
6.1
|
Blattabacterium cuenoti
Species-level Match
|
RISB0518 |
Cryptocercus punctulatus
Order: Blattodea
|
collaborative arginine biosynthesis
|
0.03% |
5.7
|
Blattabacterium cuenoti
Species-level Match
|
RISB0093 |
Blattella germanica
Order: Blattodea
|
obligate endosymbiont
|
0.03% |
5.5
|
Agrobacterium tumefaciens
Species-level Match
|
RISB0650 |
Melanaphis bambusae
Order: Hemiptera
|
None
|
0.36% |
5.4
|
Salmonella enterica
Species-level Match
|
RISB0413 |
Melanaphis sacchari
Order: Hemiptera
|
None
|
0.19% |
5.2
|
Staphylococcus
|
RISB0945 |
Callosobruchus maculatus
Order: Coleoptera
|
The strain encodes complete biosynthetic pathways for the production of B vitamins and amino acids, including tyrosine; A carbohydrate-active enzyme search revealed that the genome codes for a number of digestive enzymes, reflecting the nutritional ecology of C. maculatus
|
0.07% |
5.1
|
Treponema
|
RISB2377 |
termite
Order: Blattodea
|
when grown together, two termite-gut Treponema species influence each other's gene expression in a far more comprehensive and nuanced manner than might have been predicted based on the results of previous studies on the respective pure cultures
|
0.12% |
5.0
|
Bacteroides
|
RISB0256 |
Leptocybe invasa
Order: Hymenoptera
|
Differences in Male-Killing Rickettsia Bacteria between Lineages of the Invasive Gall-Causing Pest Leptocybe invasa
|
1.16% |
3.5
|
Raoultella
|
RISB2226 |
Leptinotarsa decemlineata
Order: Coleoptera
|
Colorado potato beetle (Leptinotarsa decemlineata) larvae exploit bacteria in their oral secretions to suppress antiherbivore defenses in tomato (Solanum lycopersicum)
|
0.03% |
3.4
|
Yokenella
|
RISB1492 |
Nezara viridula
Order: Hemiptera
|
help stinkbugs to feed on soybean developing seeds in spite of its chemical defenses by degrading isoflavonoids and deactivate soybean protease inhibitors
|
0.26% |
3.3
|
Bacteroides
|
RISB0090 |
Hyphantria cunea
Order: Lepidoptera
|
enhance the compatibility of invasive pests to new hosts and enable more rapid adaptation to new habitats.
|
1.16% |
3.3
|
Bacteroides
|
RISB1183 |
Oryzaephilus surinamensis
Order: Coleoptera
|
supplement precursors for the cuticle synthesis and thereby enhance desiccation resistance of its host
|
1.16% |
3.2
|
Streptococcus
|
RISB2625 |
Galleria mellonella
Order: Lepidoptera
|
suppress bacteria ingested with food by producing bacteriocin and by releasing a lysozyme like enzyme
|
0.08% |
2.1
|
Leuconostoc
|
RISB0812 |
Hypothenemus hampei
Order: Coleoptera
|
might contribute to caffeine breakdown using the C-18 oxidation pathway
|
0.41% |
1.8
|
Streptococcus
|
RISB2624 |
Reticulitermes flavipes
Order: Blattodea
|
can be broken down into substances such as carbon dioxide, ammonia and acetic acid
|
0.08% |
1.7
|
Rhizobium
|
RISB0135 |
Coccinella septempunctata
Order: Coleoptera
|
be commonly found in plant roots and they all have nitrogen fixation abilities
|
0.13% |
1.7
|
Vibrio
|
RISB1810 |
Monochamus galloprovincialis
Order: Coleoptera
|
Have the ability for degradation of cellulose, proteins and starch
|
0.23% |
1.6
|
Halomonas
|
RISB1808 |
Monochamus galloprovincialis
Order: Coleoptera
|
Have the ability for degradation of cellulose, proteins and starch
|
0.08% |
1.4
|
Raoultella
|
RISB1672 |
Spodoptera frugiperda
Order: Lepidoptera
|
downregulated POX but upregulated trypsin PI in this plant species
|
0.03% |
1.4
|
Streptococcus
|
RISB2604 |
Homona magnanima
Order: Lepidoptera
|
influence the growth of Bacillus thuringiensis in the larvae
|
0.08% |
1.3
|
Paraclostridium
|
RISB0028 |
Sesamia inferens
Order: Lepidoptera
|
degrade Chlorpyrifos and Chlorantraniliprole in vitro
|
0.02% |
1.1
|
Dickeya
|
RISB1086 |
Rhodnius prolixus
Order: Hemiptera
|
supply enzymatic biosynthesis of B-complex vitamins
|
0.02% |
1.0
|
Priestia
|
RISB0839 |
Helicoverpa armigera
Order: Lepidoptera
|
producing amylase
|
0.03% |
0.4
|
Kluyvera
|
RISB1064 |
Oryctes rhinoceros
Order: Coleoptera
|
gut microbe
|
0.03% |
0.3
|
Dysgonomonas
|
RISB1481 |
Brachinus elongatulus
Order: Coleoptera
|
None
|
0.21% |
0.2
|
Flavobacterium
|
RISB0659 |
Melanaphis bambusae
Order: Hemiptera
|
None
|
0.18% |
0.2
|
Treponema
|
RISB0169 |
Reticulitermes flaviceps
Order: Blattodea
|
None
|
0.12% |
0.1
|
Halomonas
|
RISB1374 |
Bemisia tabaci
Order: Hemiptera
|
None
|
0.08% |
0.1
|
Neisseria
|
RISB0512 |
Plutella xylostella
Order: Lepidoptera
|
None
|
0.04% |
0.0
|
Achromobacter
|
RISB0383 |
Aphis gossypii
Order: Hemiptera
|
None
|
0.03% |
0.0
|
Legionella
|
RISB1687 |
Polyplax serrata
Order: Phthiraptera
|
None
|
0.03% |
0.0
|
Fructobacillus
|
RISB0638 |
Formica
Order: Hymenoptera
|
None
|
0.03% |
0.0
|
Download Files
Taxonomic Analysis Files
Assembly & Gene Prediction
Raw Sequencing Files
Direct download from NCBI SRARaw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.