SRR5642305 - Pheidole flavens

Basic Information

Run: SRR5642305

Assay Type: WGS

Bioproject: PRJNA385506

Biosample: SAMN25003338

Bytes: 734669324

Center Name: EMBRAPA

Sequencing Information

Instrument: Illumina HiSeq 2500

Library Layout: PAIRED

Library Selection: RANDOM

Platform: ILLUMINA

Quality Control Information

Filter Percentage: 0.0216

QC Average Length: 148

Retained Reads: -

Geographic Information

Country: Brazil

Continent: South America

Location Name: Brazil: Mato Grosso

Latitude/Longitude: 11.8602 S 55.6222 W

Sample Information

Host: Pheidole flavens

Isolation: -

Biosample Model: Metagenome or environmental

Collection Date: 2015

Taxonomic Classification

Potential Symbionts

Based on our current records database, this section aims to identify potential functional symbionts in this metagenome sample, with scoring based on:

  • Relative abundance in sample
  • Species-level matches with known symbionts
  • Host insect order matches
  • Functional record completeness

Note: Showing top 3 highest scoring records for each species/genus

Symbiont Name Record Host Species Function Abundance
Score
Streptomyces sp. T12
RISB0943
Polybia plebeja
Order: Hymenoptera
this bacterium produces antimicrobial compounds that are active against Hirsutella citriformis, a natural fungal enemy of its host, and the human pathogens Staphylococcus aureus and Candida albicans
0.56%
19.5
Streptomyces sp. SUK 48
RISB0943
Polybia plebeja
Order: Hymenoptera
this bacterium produces antimicrobial compounds that are active against Hirsutella citriformis, a natural fungal enemy of its host, and the human pathogens Staphylococcus aureus and Candida albicans
0.46%
19.4
Streptomyces sp. WAC00303
RISB0943
Polybia plebeja
Order: Hymenoptera
this bacterium produces antimicrobial compounds that are active against Hirsutella citriformis, a natural fungal enemy of its host, and the human pathogens Staphylococcus aureus and Candida albicans
0.32%
19.3
Arsenophonus sp. aPb
RISB0982
Vespula penalica
Order: Hymenoptera
Arsenophonus sp. has been negatively associated with honeybee hive health
2.64%
19.1
Spiroplasma sp. SV19
RISB1353
Cephus cinctus
Order: Hymenoptera
The bacterium also encoded biosynthetic pathways for essential vitamins B2, B3, and B9. We identified putative Spiroplasma virulence genes: cardiolipin and chitinase.
0.09%
18.4
Spiroplasma sp. TIUS-1
RISB1353
Cephus cinctus
Order: Hymenoptera
The bacterium also encoded biosynthetic pathways for essential vitamins B2, B3, and B9. We identified putative Spiroplasma virulence genes: cardiolipin and chitinase.
0.05%
18.4
Spiroplasma sp. BIUS-1
RISB1353
Cephus cinctus
Order: Hymenoptera
The bacterium also encoded biosynthetic pathways for essential vitamins B2, B3, and B9. We identified putative Spiroplasma virulence genes: cardiolipin and chitinase.
0.03%
18.4
Arsenophonus nasoniae
RISB0428
Nasonia vitripennis
Order: Hymenoptera
male killing
1.52%
16.8
Pseudomonas sp. CIP-10
RISB1564
Liometopum apiculatum
Order: Hymenoptera
None
1.68%
16.7
Arsenophonus nasoniae
RISB0366
Pachycrepoideus vindemmiae
Order: Hymenoptera
None
1.52%
16.5
Bartonella
RISB1673
Apis mellifera
Order: Hymenoptera
a gut symbiont of insects and that the adaptation to blood-feeding insects facilitated colonization of the mammalian bloodstream
3.95%
16.5
Stenotrophomonas maltophilia
RISB2004
Trichogramma chilonis
Order: Hymenoptera
could significantly increase both female count
0.18%
16.1
Gilliamella
RISB0102
Apis mellifera
Order: Hymenoptera
Gilliamella apicola carries the gene for the desaturase FADS2, which is able to metabolize polyunsaturated fatty acids from pollen and synthesize endocannabinoid, a lipogenic neuroactive substance, thereby modulating reward learning and memory in honeybees.
0.38%
15.4
Providencia rettgeri
RISB1352
Nasonia vitripennis
Order: Hymenoptera
None
0.17%
15.2
Pseudomonas sp. DTU_2021_1001937_2_SI_NGA_ILE_001
RISB1564
Liometopum apiculatum
Order: Hymenoptera
None
0.09%
15.1
Wolbachia
RISB0190
Encarsia formosa
Order: Hymenoptera
Wolbachia's parthenogenesis-induction feminization factor (piff) gene modulates sex determination in Encarsia formosa by regulating doublesex (dsx) expression. When Wolbachia is removed, female-specific dsx decreases while male-specific dsx increases, resulting in haploid male offspring
0.09%
15.1
Zymomonas mobilis
RISB1326
Vespa mandarinia
Order: Hymenoptera
None
0.06%
15.1
Pseudomonas sp. GCEP-101
RISB1564
Liometopum apiculatum
Order: Hymenoptera
None
0.04%
15.0
Wolbachia
RISB1584
Nasonia vitripennis
Order: Hymenoptera
there were few significant changes in immune or reproductive proteins between samples with and without Wolbachia infection. Differentially expressed proteins were involved in the binding process, catalytic activity, and the metabolic process
0.09%
14.9
Apibacter
RISB0603
Apis cerana
Order: Hymenoptera
The acquisition of genes for the degradation of the toxic monosaccharides potentiates Apibacter with the ability to utilize the pollen hydrolysis products, at the same time enabling monosaccharide detoxification for the host
0.33%
14.8
Wolbachia
RISB2601
Asobara tabida
Order: Hymenoptera
Wolbachia is necessary for oogenesis in these A. tabida strains,aposymbiotic female wasps were completely incapable of producing mature oocytes and therefore could not reproduce
0.09%
13.6
Bacteroides
RISB0256
Leptocybe invasa
Order: Hymenoptera
Differences in Male-Killing Rickettsia Bacteria between Lineages of the Invasive Gall-Causing Pest Leptocybe invasa
0.10%
12.4
Bacteroides
RISB2590
Encarsia pergandiella
Order: Hymenoptera
associated with thelytokous parthenogenetic reproduction in Encarsia, a genus of parasitoid wasps
0.10%
12.0
Massilia
RISB2151
Osmia bicornis
Order: Hymenoptera
may be essential to support Osmia larvae in their nutrient uptake
0.31%
11.6
Duganella
RISB2152
Osmia bicornis
Order: Hymenoptera
may be essential to support Osmia larvae in their nutrient uptake
0.10%
11.4
Variovorax
RISB2153
Osmia bicornis
Order: Hymenoptera
may be essential to support Osmia larvae in their nutrient uptake
0.04%
11.3
Bacillus cereus
RISB2161
Termitidae
Order: Blattodea
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases that are secreted by gut microbiota to digest the structural and recalcitrant lignocellulosic residues in their foods.
1.10%
11.1
Acinetobacter
RISB2000
Trichogramma chilonis
Order: Hymenoptera
could significantly increase both female count
0.12%
11.0
Gilliamella
RISB1945
Apis cerana
Order: Hymenoptera
None
0.38%
10.4
Bacillus thuringiensis
RISB2177
Armadillidae
Order: Isopoda
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases that are secreted by gut microbiota to digest the structural and recalcitrant lignocellulosic residues in their foods.
0.35%
10.4
Apibacter
RISB0604
Apis cerana
Order: Hymenoptera
None
0.33%
10.3
Buchnera aphidicola
RISB0236
Acyrthosiphon pisum
Order: Hemiptera
Buchnera the nutritional endosymbiont of A. pisum is located inside of bacteriocytes and requires aspartate from the aphid host, because it cannot make it de novo. Further Buchnera needs aspartate for the biosynthesis of the essential amino acids lysine and threonine, which the aphid and Buchnera require for survival
0.18%
10.2
Serratia marcescens
RISB0120
Nezara viridula
Order: Hemiptera
plays an important role in interactions between insects and plants and could therefore be considered a valuable target for the development of sustainable pest control strategies;transmitted bacteria impacted plant chemical defenses and were able to degrade toxic plant metabolites, aiding the shield bug in its nutrition
0.11%
10.1
Burkholderia gladioli
RISB1172
Lagria villosa
Order: Coleoptera
process a cryptic gene cluster that codes for the biosynthesis of a novel antifungal polyketide with a glutarimide pharmacophore, which led to the discovery of the gladiofungins as previously-overlooked components of the antimicrobial armory of the beetle symbiont
0.11%
10.1
Bacillus cereus
RISB2489
Anticarsia gemmatalis
Order: Lepidoptera
allow the adaptation of this insect to plants rich in protease inhibitors, minimizing the potentially harmful consequences of protease inhibitors from some of this insect host plants, such as soybean
1.10%
10.1
Klebsiella oxytoca
RISB0130
Ceratitis capitata
Order: Diptera
The intestinal microbiota structure was significantly influenced by the probiotic treatment while still maintaining a stable core dominant community of Enterobacteriacea. The  colony with these microbiome had the most improved potential functions in terms of gut microbes as well as the carbohydrates active enzymes most improved potential functions.
0.08%
10.1
Pantoea sp. SOD02
RISB0118
Nezara viridula
Order: Hemiptera
plays an important role in interactions between insects and plants and could therefore be considered a valuable target for the development of sustainable pest control strategies;transmitted bacteria impacted plant chemical defenses and were able to degrade toxic plant metabolites, aiding the shield bug in its nutrition
0.06%
10.1
Pantoea sp. BRR-3P
RISB0118
Nezara viridula
Order: Hemiptera
plays an important role in interactions between insects and plants and could therefore be considered a valuable target for the development of sustainable pest control strategies;transmitted bacteria impacted plant chemical defenses and were able to degrade toxic plant metabolites, aiding the shield bug in its nutrition
0.03%
10.0
Citrobacter sp. RHBSTW-00821
RISB1503
Bactrocera dorsalis
Order: Diptera
Pesticide-degrading bacteria were frequently detected from pesticide-resistant insects. Susceptible insects became resistant after inoculation of the pesticide-degrading symbiont
1.46%
10.0
Buchnera aphidicola
RISB2485
Macrosiphum euphorbiae
Order: Hemiptera
symbiont expression patterns differ between aphid clones with differing levels of virulence, and are influenced by the aphids' host plant. Potentially, symbionts may contribute to differential adaptation of aphids to host plant resistance
0.18%
9.9
Escherichia coli
RISB1339
Manduca sexta
Order: Lepidoptera
modulate immunity-related gene expression in the infected F0 larvae, and also in their offspring, triggered immune responses in the infected host associated with shifts in both DNA methylation and histone acetylation
0.60%
9.9
Serratia marcescens
RISB0477
Spodoptera litura
Order: Lepidoptera
The ingestion of bacteria negatively affected the development and nutritional physiology of insect. The bacteria after successful establishment started degrading the gut wall and invaded the haemocoel thereby causing the death of the host.
0.11%
9.9
Serratia marcescens
RISB0747
Rhodnius prolixus
Order: Hemiptera
Acinetobacter sp. in C. chinensis enriched after treating with saponin, and when incubating bacteria with saponin for 72 h, saponin content significantly decreased from 4.054 to 1.867 mg/mL (by 16S rRNA metagenome sequencing and HPLC)
0.11%
9.8
Burkholderia gladioli
RISB1729
Lagria hirta
Order: Coleoptera
the symbionts inhibit the growth of antagonistic fungi on the eggs of the insect host, indicating that the Lagria-associated Burkholderia have evolved from plant pathogenic ancestors into insect defensive mutualists
0.11%
9.4
Stenotrophomonas maltophilia
RISB1122
Bombyx mori
Order: Lepidoptera
facilitate host resistance against organophosphate insecticides, provides essential amino acids that increase host fitness and allow the larvae to better tolerate the toxic effects of the insecticide.
0.18%
9.2
Mammaliicoccus sciuri
RISB0075
Bombyx mori
Order: Lepidoptera
could produce a secreted chitinolytic lysozyme (termed Msp1) to damage fungal cell walls,completely inhibit the spore germination of fungal entomopathogens Metarhizium robertsii and Beauveria bassiana
0.06%
9.1
Buchnera aphidicola
RISB0685
Acyrthosiphon pisum
Order: Hemiptera
It supplies the host with vitamins and essential amino acids, such as arginine and methionine that aphids cannot synthesize or derive insufficiently from their diet, the phloem sap of plants
0.18%
9.0
Klebsiella oxytoca
RISB2565
Acrolepiopsis assectella
Order: Lepidoptera
Klebsiella oxytoca and Bacillus spp. produce the volatile alkyl disulfides present in the fecal pellets, which serve as kairomones to attract the parasitoid Diadromus pulchellus to the moth host
0.08%
9.0
Burkholderia gladioli
RISB1604
Lagria villosa
Order: Coleoptera
Bacteria produce icosalide, an unusual two-tailed lipocyclopeptide antibiotic,which is active against entomopathogenic bacteria, thus adding to the chemical armory protecting beetle offspring
0.11%
8.9
Pantoea sp. SOD02
RISB0119
Nezara viridula
Order: Hemiptera
plays an important role in interactions between insects and plants and could therefore be considered a valuable target for the development of sustainable pest control strategies.
0.06%
8.6
Arthrobacter sp. StoSoilB13
RISB0769
Delia antiqua
Order: Diptera
showed significant volatile inhibition activity against fungal entomopathogen Fusarium moniliforme, Botryosphaeria dothidea and both Fusarium oxysporum respectively
0.07%
8.4
Morganella morganii
RISB0772
Delia antiqua
Order: Diptera
showed significant volatile inhibition activity against fungal entomopathogen Fusarium moniliforme, Botryosphaeria dothidea and both Fusarium oxysporum respectively
0.05%
8.3
Klebsiella oxytoca
RISB1139
Musca domestica
Order: Diptera
It is associated to newly laid housefly eggs, where it is deposited by the female, and has a role in oviposition as well as protection against potential pathogens
0.08%
8.3
Escherichia coli
RISB0128
Tribolium castaneum
Order: Coleoptera
may produce 4,8-dimethyldecanal (DMD) production that is strongly associated with attraction to females and host pheromone communication
0.60%
8.3
Morganella morganii
RISB0008
Phormia regina
Order: Diptera
deterred oviposition by female stable flies; The flies' oviposition decisions appear to be guided by bacteria-derived semiochemicals as the bacteria
0.05%
8.0
Blattabacterium cuenoti
RISB0133
Panesthiinae
Order: Blattodea
enables hosts to subsist on a nutrient-poor diet; endosymbiont genome erosions are associated with repeated host transitions to an underground life
0.07%
8.0
Morganella morganii
RISB1867
Costelytra zealandica
Order: Coleoptera
Female beetles were previously shown to use phenol as their sex pheromone produced by symbiotic bacteria in the accessory or colleterial gland
0.05%
7.9
Stenotrophomonas maltophilia
RISB1227
Delia antiqua
Order: Diptera
six bacteria protect larvae from infection with the entomopathogen Beauveria bassiana through symbiotic bacterium-derived organic acids
0.18%
7.9
Enterococcus faecalis
RISB0497
Cryptolestes ferrugineus
Order: Coleoptera
bacteria can degrade malathion, pirimiphos-methyl, and deltamethrin and utilize these insecticides as the carbon source in vitro.
0.16%
7.7
Enterococcus faecalis
RISB1411
Bactrocera dorsalis
Order: Diptera
female Bactrocera dorsalis fed Enterococcus faecalis and Klebsiella oxytoca enriched diets lived longer but had lower fecundity
0.16%
7.7
Enterobacter cloacae
RISB1699
Plutella xylostella
Order: Lepidoptera
play an important role in the breakdown of plant cell walls, detoxification of plant phenolics, and synthesis of amino acids.
0.09%
7.6
Enterococcus faecalis
RISB2042
Harpalus pensylvanicus
Order: Coleoptera
E. faecalis facilitate seed consumption by H. pensylvanicus, possibly by contributing digestive enzymes to their host
0.16%
7.5
Citrobacter sp. RHBSTW-00821
RISB1571
Bactrocera tau
Order: Diptera
could attract male and female B. tau
1.46%
7.2
Enterobacter cloacae
RISB2217
Thermobia domestica
Order: Zygentoma
Mediated by two microbial symbiont, the firebat saggregates in response to the faeces of conspecifics
0.09%
7.1
Enterobacter cloacae
RISB1428
Rhynchophorus ferrugineus
Order: Coleoptera
promote the development and body mass gain of RPW larvae by improving their nutrition metabolism
0.09%
7.0
Kosakonia sp. CCTCC M2018092
RISB0810
Hypothenemus hampei
Order: Coleoptera
might contribute to caffeine breakdown using the C-16 oxidation pathway
0.21%
6.6
Kosakonia sp. SMBL-WEM22
RISB0810
Hypothenemus hampei
Order: Coleoptera
might contribute to caffeine breakdown using the C-16 oxidation pathway
0.05%
6.5
Escherichia coli
RISB2120
Galleria mellonella
Order: Lepidoptera
mediate trans-generational immune priming
0.60%
6.4
Asaia
RISB0854
Anopheles stephensi
Order: Diptera
Two complete operons encoding cytochrome bo3-type ubiquinol terminal oxidases (cyoABCD-1 and cyoABCD-2) were found in most Asaia genomes, possibly offering alternative terminal oxidases and allowing the flexible transition of respiratory pathways. Genes involved in the production of 2,3-butandiol and inositol have been found in Asaia sp. W12, possibly contributing to biofilm formation and stress tolerance.
1.11%
6.1
Providencia rettgeri
RISB1001
Anastrepha obliqua
Order: Diptera
improve the sexual competitiveness of males
0.17%
6.0
Salmonella enterica
RISB0413
Melanaphis sacchari
Order: Hemiptera
None
0.83%
5.8
Blattabacterium cuenoti
RISB0518
Cryptocercus punctulatus
Order: Blattodea
collaborative arginine biosynthesis
0.07%
5.8
Providencia rettgeri
RISB1169
Bactrocera dorsalis
Order: Diptera
Promote the growth of larvae
0.17%
5.7
Agrobacterium tumefaciens
RISB0650
Melanaphis bambusae
Order: Hemiptera
None
0.61%
5.6
Blattabacterium cuenoti
RISB0093
Blattella germanica
Order: Blattodea
obligate endosymbiont
0.07%
5.5
Staphylococcus epidermidis
RISB1070
Oryctes rhinoceros
Order: Coleoptera
gut microbe
0.05%
5.3
Bosea sp. PAMC 26642
RISB1702
Phlebotomus papatasi
Order: Diptera
None
0.06%
5.1
Methylovirgula
RISB0137
Coccinella septempunctata
Order: Coleoptera
Methylovirgula is ubiquitous in soil and has been found in many soil samples as a major species producing carbon activity, scholars have found that the microorganism has the highest content in mixed peat swamp forest systems and has the effect of harnessing and reducing methane
0.06%
5.1
Acetobacter
RISB1865
Drosophila melanogaster
Order: Diptera
The bacterial cells may thus be able to ameliorate the pH of the acidic region, by the release of weak bases.Additionally, the bacteria have a complex relationship with physiological processes which may affect ionic homeostasis in the gut, such as nutrition and immune function
0.06%
5.1
Caballeronia zhejiangensis
RISB0688
Anasa tristis
Order: Hemiptera
None
0.04%
5.0
Acinetobacter
RISB0140
Nilaparvata lugens
Order: Hemiptera
Acinetobacter can effectively degrade cellulose and harmful substances such as polystyrene and phenol.It can help the short-winged BPH to improve its detoxification ability in harsh environments and adapt to environmental changes at any time.
0.12%
5.0
Acinetobacter
RISB0730
Curculio chinensis
Order: Coleoptera
Acinetobacter sp. in C. chinensis enriched after treating with saponin, and when incubating bacteria with saponin for 72 h, saponin content significantly decreased from 4.054 to 1.867 mg/mL (by 16S rRNA metagenome sequencing and HPLC)
0.12%
4.8
Clostridium
RISB2301
Pyrrhocoris apterus
Order: Hemiptera
could play an important role for the insect by degrading complex dietary components, providing nutrient supplementation, or detoxifying noxious chemicals (e.g. cyclopropenoic fatty acids or gossypol) in the diet
0.51%
4.7
Asaia
RISB0014
Aedes aegypti
Order: Diptera
The bacterium Asaia is considered a highly promising candidate for arboviral control in Aedes mosquitoes.Asaia could play a role in inhibiting CHIKV within Ae. aegypti.
1.11%
4.5
Asaia
RISB1315
Sogatella furcifera
Order: Hemiptera
infected WBPH were of shorter nymphal duration and heavier adult weight. Asaia sp. plays a role in improving WBPH fitness through involvement in host’s nutrient supply
1.11%
4.5
Novosphingobium
RISB1837
Dendroctonus valens
Order: Coleoptera
It can trongly degrade naringenin, and pinitol, the main soluble carbohydrate of P. tabuliformis, is retained in L. procerum-infected phloem and facilitate naringenin biodegradation by the microbiotas.
0.11%
4.1
Acetobacter
RISB0961
Drosophila melanogaster
Order: Diptera
The exist of Acetobacter had a balancing effect on food ingestion when carbohydrate levels were high in the warmer months, stabilizing fitness components of flies across the year.
0.06%
3.6
Rhizobium
RISB0135
Coccinella septempunctata
Order: Coleoptera
be commonly found in plant roots and they all have nitrogen fixation abilities
1.24%
2.8
Acetobacter
RISB0184
Drosophila melanogaster
Order: Diptera
enhancing the brain levels of tyrosine decarboxylase 2 (Tdc2), which is an enzyme that synthesizes octopamine (OA)
0.06%
2.3
Liberibacter
RISB2310
Bactericerca cockerelli
Order: Hemiptera
manipulate plant signaling and defensive responses, suppress accumulation of defense transcripts like JA and SA
0.08%
2.3
Bacteroides
RISB0090
Hyphantria cunea
Order: Lepidoptera
enhance the compatibility of invasive pests to new hosts and enable more rapid adaptation to new habitats.
0.10%
2.2
Streptococcus
RISB2625
Galleria mellonella
Order: Lepidoptera
suppress bacteria ingested with food by producing bacteriocin and by releasing a lysozyme like enzyme
0.18%
2.2
Sphingomonas
RISB0420
Aphis gossypii
Order: Hemiptera
Sphingomonas could mediate A. gossypii resistance to imidacloprid by hydroxylation and nitroreduction
0.05%
2.1
Bradyrhizobium
RISB0135
Coccinella septempunctata
Order: Coleoptera
be commonly found in plant roots and they all have nitrogen fixation abilities
0.47%
2.0
Vibrio
RISB1810
Monochamus galloprovincialis
Order: Coleoptera
Have the ability for degradation of cellulose, proteins and starch
0.60%
1.9
Sphingomonas
RISB1307
Aphis gossypii
Order: Hemiptera
have been previously described in associations with phloem-feeding insects, in low abundances
0.05%
1.9
Lachnospira
RISB2110
Blattella germanica
Order: Blattodea
Hydrolyze polysaccharide; assist digestion; synthesize acetate, propionate, and butyrate
0.07%
1.8
Streptococcus
RISB2624
Reticulitermes flavipes
Order: Blattodea
can be broken down into substances such as carbon dioxide, ammonia and acetic acid
0.18%
1.8
Liberibacter
RISB2524
Bactericera cockerelli
Order: Hemiptera
Reduced expression of plant defensive gene in tomato probably for psyllid success
0.08%
1.7
Sphingomonas
RISB0134
Spodoptera frugiperda
Order: Lepidoptera
provide a protective effect to against chlorantraniliprole stress to S. frugiperda
0.05%
1.7
Clostridium
RISB0028
Sesamia inferens
Order: Lepidoptera
degrade Chlorpyrifos and Chlorantraniliprole in vitro
0.51%
1.6
Streptococcus
RISB2604
Homona magnanima
Order: Lepidoptera
influence the growth of Bacillus thuringiensis in the larvae
0.18%
1.4
Cronobacter
RISB0247
Tenebrio molitor
Order: Coleoptera
may be indirectly involved in the digestion of PE
0.17%
1.2
Paraclostridium
RISB0028
Sesamia inferens
Order: Lepidoptera
degrade Chlorpyrifos and Chlorantraniliprole in vitro
0.06%
1.1
Liberibacter
RISB2333
Cacopsylla pyri
Order: Hemiptera
behaves as an endophyte rather than a pathogen
0.08%
1.0
Ralstonia
RISB0243
Spodoptera frugiperda
Order: Lepidoptera
None
0.81%
0.8
Cedecea
RISB1570
Bactrocera tau
Order: Diptera
could attract male and female B. tau
0.02%
0.7
Gilliamella
RISB0620
Spodoptera frugiperda
Order: Lepidoptera
degrade amygdalin
0.38%
0.7
Clostridium
RISB1959
Pyrrhocoridae
Order: Hemiptera
None
0.51%
0.5
Cupriavidus
RISB0694
Alydus tomentosus
Order: Hemiptera
None
0.45%
0.5
Paraburkholderia
RISB0125
Physopelta gutta
Order: Hemiptera
None
0.44%
0.4
Priestia
RISB0839
Helicoverpa armigera
Order: Lepidoptera
producing amylase
0.10%
0.4
Apibacter
RISB1138
Musca domestica
Order: Diptera
None
0.33%
0.3
Flavobacterium
RISB0659
Melanaphis bambusae
Order: Hemiptera
None
0.20%
0.2
Methylorubrum
RISB0903
Myzus persicae
Order: Hemiptera
None
0.09%
0.1
Helicobacter
RISB0662
Melanaphis bambusae
Order: Hemiptera
None
0.05%
0.1
Variovorax
RISB1712
Phlebotomus papatasi
Order: Diptera
None
0.04%
0.0
Legionella
RISB1687
Polyplax serrata
Order: Phthiraptera
None
0.03%
0.0
Cedecea
RISB0504
Plutella xylostella
Order: Lepidoptera
None
0.02%
0.0

Download Files

Taxonomic Analysis Files

Kraken Report

Detailed taxonomic classification

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Krona HTML

Interactive taxonomic visualization

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Bracken Results

Species abundance estimation

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Assembly & Gene Prediction

Assembled Contigs

MEGAHIT assembly results

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Predicted Genes

Gene sequences (FASTA)

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Gene Annotation

GFF format annotation

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Genome Binning

MetaBAT2 Bins

Compressed genome bins

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Bin Information

Quality metrics and statistics

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR5642305
700.6 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

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