SRR5342707 - Cycloneda sanguinea
Basic Information
Run: SRR5342707
Assay Type: WGS
Bioproject: PRJNA377633
Biosample: SAMN25047052
Bytes: 1638992424
Center Name: EMBRAPA
Sequencing Information
Instrument: Illumina HiSeq 2500
Library Layout: PAIRED
Library Selection: RANDOM
Platform: ILLUMINA
Quality Control Information
Filter Percentage: -
QC Average Length: -
Retained Reads: -
Geographic Information
Country: Brazil
Continent: South America
Location Name: Brazil: Distrito Federal
Latitude/Longitude: 15.73 S 47.9002 W
Sample Information
Host: Cycloneda sanguinea
Isolation: -
Biosample Model: Metagenome or environmental
Collection Date: 2015
Taxonomic Classification
Taxonomic visualization Not Available
The interactive Krona chart for this metagenome is currently being processed or unavailable for metagenome quality reason. Please check back later or download the raw files below.
Potential Symbionts
About Potential Symbionts
This table shows potential symbiont identified in the metagenome sample. Matches are scored based on:
- Relative abundance in the sample
- Species-level matches with known symbionts
- Host insect order matches with reference records
- Completeness and richness of functional records
Based on our current records database, this section aims to identify potential functional symbionts in this metagenome sample, with scoring based on:
- Relative abundance in sample
- Species-level matches with known symbionts
- Host insect order matches
- Functional record completeness
Note: Showing top 3 highest scoring records for each species/genus
| Symbiont Name | Record | Host Species | Function | Abundance |
Score
Score Composition:
Higher scores indicate stronger symbiotic relationship potential |
|---|
Download Files
Files Not Available
The analysis files for this metagenome are currently being processed or filtered for quality reason.
Raw Sequencing Files
Direct download from NCBI SRARaw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.