SRR333074 - Odonterterms yunnanensis

Basic Information

Run: SRR333074

Assay Type: WGS

Bioproject: PRJNA70279

Biosample: SAMN00713555

Bytes: 145614313

Center Name: INSTITUTE OF PLANT PHYSIOLOGY AND ECOLOGY, SIBS, C

Sequencing Information

Instrument: 454 GS FLX

Library Layout: SINGLE

Library Selection: RANDOM

Platform: LS454

Geographic Information

Country: -

Continent: -

Location Name: -

Latitude/Longitude: -

Sample Information

Host: Odonterterms yunnanensis

Isolation: -

Biosample Model: -

Collection Date: Mar-24

Taxonomic Classification

Potential Symbionts

About Potential Symbionts

This table shows potential symbiont identified in the metagenome sample. Matches are scored based on:

Relative abundance in the sample
Species-level matches with known symbionts
Host insect order matches with reference records
Completeness and richness of functional records

Note: only the three highest scoring comparison records were retained for each symbiont species or genus in the sample

Based on our current records database, this section aims to identify potential functional symbionts in this metagenome sample, with scoring based on:

Relative abundance in sample
Species-level matches with known symbionts
Host insect order matches
Functional record completeness

Note: Showing top 3 highest scoring records for each species/genus

Symbiont Name	Record	Host Species	Function	Abundance	Score Score Composition: Symbiont Abundance Species match bonus Host match bonus Function richness Higher scores indicate stronger symbiotic relationship potential
Trabulsiella Host Order Match	RISB2201	Termitidae Order: Blattodea	The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases that are secreted by gut microbiota to digest the structural and recalcitrant lignocellulosic residues in their foods.	22.49%	37.5
Trabulsiella	RISB1685	Melolontha hippocastani Order: Coleoptera	Involved in cellulose degradation	22.49%	23.2
Treponema primitia Species-level Match Host Order Match	RISB2377	termite Order: Blattodea	when grown together, two termite-gut Treponema species influence each other's gene expression in a far more comprehensive and nuanced manner than might have been predicted based on the results of previous studies on the respective pure cultures	1.31%	21.2
Bacteroides Host Order Match	RISB2623	Reticulitermes flavipes Order: Blattodea	has the ability to degrade urate	6.26%	16.9
Leadbettera Host Order Match	RISB2376	termite Order: Blattodea	when grown together, two termite-gut Treponema species influence each other's gene expression in a far more comprehensive and nuanced manner than might have been predicted based on the results of previous studies on the respective pure cultures	1.57%	16.5
Kosakonia sp. BYX6 Species-level Match	RISB0810	Hypothenemus hampei Order: Coleoptera	might contribute to caffeine breakdown using the C-16 oxidation pathway	5.16%	11.6
Bacteroides	RISB0256	Leptocybe invasa Order: Hymenoptera	Differences in Male-Killing Rickettsia Bacteria between Lineages of the Invasive Gall-Causing Pest Leptocybe invasa	6.26%	8.6
Bacteroides	RISB0090	Hyphantria cunea Order: Lepidoptera	enhance the compatibility of invasive pests to new hosts and enable more rapid adaptation to new habitats.	6.26%	8.4
Dysgonomonas	RISB1235	Hermetia illucens Order: Diptera	provides the tools for degrading of a broad range of substrates	2.08%	3.3
Dysgonomonas	RISB1481	Brachinus elongatulus Order: Coleoptera	None	2.08%	2.1