SRR28387219 - simuliidae

Basic Information

Run: SRR28387219

Assay Type: WGS

Bioproject: PRJNA1088476

Biosample: SAMN40472408

Bytes: 1231739297

Center Name: KU LEUVEN

Sequencing Information

Instrument: Illumina NovaSeq 6000

Library Layout: PAIRED

Library Selection: RANDOM PCR

Platform: ILLUMINA

Geographic Information

Country: Cameroon

Continent: Africa

Location Name: Cameroon

Latitude/Longitude: 4.347925 N 11.635309 E

Sample Information

Host: simuliidae

Isolation: -

Biosample Model: Metagenome or environmental

Collection Date: 2021-07

Taxonomic Classification

Potential Symbionts

Based on our current records database, this section aims to identify potential functional symbionts in this metagenome sample, with scoring based on:

  • Relative abundance in sample
  • Species-level matches with known symbionts
  • Host insect order matches
  • Functional record completeness

Note: Showing top 3 highest scoring records for each species/genus

Symbiont Name Record Host Species Function Abundance
Score
Stenotrophomonas maltophilia
RISB1227
Delia antiqua
Order: Diptera
six bacteria protect larvae from infection with the entomopathogen Beauveria bassiana through symbiotic bacterium-derived organic acids
3.34%
21.0
Enterobacter sp. T2
RISB0893
Bactrocera dorsalis
Order: Diptera
be beneficial, with some quality control indices, such as adult size, pupal weight, survival rate under stress and nutritionally rich conditions, and mating competitiveness, being significantly increased, while slight nonsignificant increases in emergence rate and flight ability were observed
0.62%
20.6
Enterobacter sp. JH25
RISB0893
Bactrocera dorsalis
Order: Diptera
be beneficial, with some quality control indices, such as adult size, pupal weight, survival rate under stress and nutritionally rich conditions, and mating competitiveness, being significantly increased, while slight nonsignificant increases in emergence rate and flight ability were observed
0.45%
20.5
Stenotrophomonas maltophilia
RISB1141
Hermetia illucens
Order: Diptera
enhance the insect growth performance when reared on an unbalanced nutritionally poor diet
3.34%
20.1
Klebsiella oxytoca
RISB0130
Ceratitis capitata
Order: Diptera
The intestinal microbiota structure was significantly influenced by the probiotic treatment while still maintaining a stable core dominant community of Enterobacteriacea. The  colony with these microbiome had the most improved potential functions in terms of gut microbes as well as the carbohydrates active enzymes most improved potential functions.
0.08%
20.1
Enterobacter sp. 638
RISB0893
Bactrocera dorsalis
Order: Diptera
be beneficial, with some quality control indices, such as adult size, pupal weight, survival rate under stress and nutritionally rich conditions, and mating competitiveness, being significantly increased, while slight nonsignificant increases in emergence rate and flight ability were observed
0.06%
20.1
Stenotrophomonas maltophilia
RISB1401
Delia antiqua
Order: Diptera
suppressed Beauveria bassiana conidia germination and hyphal growth
3.34%
19.7
Lactiplantibacillus plantarum
RISB0674
Drosophila melanogaster
Order: Diptera
could effectively inhibit fungal spore germinations
3.59%
19.6
Klebsiella michiganensis
RISB1052
Bactrocera dorsalis
Order: Diptera
K. michiganensis BD177 has the strain-specific ability to provide three essential amino acids (phenylalanine, tryptophan and methionine) and two vitamins B (folate and riboflavin) to B. dorsalis
0.04%
18.9
Serratia marcescens
RISB1291
Aedes aegypti
Order: Diptera
facilitates arboviral infection through a secreted protein named SmEnhancin, which digests membrane-bound mucins on the mosquito gut epithelia, thereby enhancing viral dissemination.
0.07%
18.7
Asaia
RISB0854
Anopheles stephensi
Order: Diptera
Two complete operons encoding cytochrome bo3-type ubiquinol terminal oxidases (cyoABCD-1 and cyoABCD-2) were found in most Asaia genomes, possibly offering alternative terminal oxidases and allowing the flexible transition of respiratory pathways. Genes involved in the production of 2,3-butandiol and inositol have been found in Asaia sp. W12, possibly contributing to biofilm formation and stress tolerance.
3.66%
18.7
Lactiplantibacillus plantarum
RISB0608
Drosophila melanogaster
Order: Diptera
None
3.59%
18.6
Citrobacter sp. RHB25-C09
RISB1503
Bactrocera dorsalis
Order: Diptera
Pesticide-degrading bacteria were frequently detected from pesticide-resistant insects. Susceptible insects became resistant after inoculation of the pesticide-degrading symbiont
0.01%
18.6
Bacillus cereus
RISB1872
Aedes aegypti
Order: Diptera
gut microbiome
3.21%
18.5
Citrobacter amalonaticus
RISB0192
Hermetia illucens
Order: Diptera
can directly promote the expression of two gene families related to intestinal protein metabolism: Hitryp serine protease trypsin family and Himtp metallopeptidase family
0.02%
18.4
Klebsiella oxytoca
RISB1139
Musca domestica
Order: Diptera
It is associated to newly laid housefly eggs, where it is deposited by the female, and has a role in oviposition as well as protection against potential pathogens
0.08%
18.3
Morganella morganii
RISB0772
Delia antiqua
Order: Diptera
showed significant volatile inhibition activity against fungal entomopathogen Fusarium moniliforme, Botryosphaeria dothidea and both Fusarium oxysporum respectively
0.03%
18.3
Bacillus cereus
RISB1701
Phlebotomus papatasi
Order: Diptera
None
3.21%
18.2
Morganella morganii
RISB0008
Phormia regina
Order: Diptera
deterred oviposition by female stable flies; The flies' oviposition decisions appear to be guided by bacteria-derived semiochemicals as the bacteria
0.03%
18.0
Acinetobacter sp. ESL0695
RISB2083
Aedes aegypti
Order: Diptera
axenic larvae cannot develop
2.38%
17.9
Citrobacter freundii
RISB1221
Delia antiqua
Order: Diptera
six bacteria protect larvae from infection with the entomopathogen Beauveria bassiana through symbiotic bacterium-derived organic acids
0.10%
17.8
Serratia marcescens
RISB0009
Phormia regina
Order: Diptera
prompted oviposition by flies; The flies' oviposition decisions appear to be guided by bacteria-derived semiochemicals as the bacteria
0.07%
17.8
Serratia sp. JSRIV002
RISB1516
Anopheles stephensi
Order: Diptera
produce lipodepsipeptides, stephensiolides A-K, that have antibiotic activity and facilitate bacterial surface motility.
0.22%
17.6
Asaia
RISB0014
Aedes aegypti
Order: Diptera
The bacterium Asaia is considered a highly promising candidate for arboviral control in Aedes mosquitoes.Asaia could play a role in inhibiting CHIKV within Ae. aegypti.
3.66%
17.0
Pantoea dispersa
RISB1413
Bactrocera dorsalis
Order: Diptera
causing female Bactrocera dorsalis laid more eggs but had shorter lifespan
0.50%
17.0
Escherichia coli
RISB1769
Calliphoridae
Order: Diptera
None
1.93%
16.9
Morganella morganii
RISB0611
Bactrocera dorsalis
Order: Diptera
may hydrolysing nitrogenous waste and providing metabolizable nitrogen for B. dorsalis
0.03%
16.8
Asaia
RISB2533
Anopheles stephensi
Order: Diptera
Asaia sp. strain effectively lodged in the female gut and salivary glands, sites that are crucial for Plasmodium sp. development and transmission
3.66%
16.6
Acetobacter
RISB1865
Drosophila melanogaster
Order: Diptera
The bacterial cells may thus be able to ameliorate the pH of the acidic region, by the release of weak bases.Additionally, the bacteria have a complex relationship with physiological processes which may affect ionic homeostasis in the gut, such as nutrition and immune function
1.45%
16.5
Pantoea agglomerans
RISB2197
Termitidae
Order: Blattodea
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases that are secreted by gut microbiota to digest the structural and recalcitrant lignocellulosic residues in their foods.
6.28%
16.3
Pantoea sp. MT58
RISB1708
Phlebotomus papatasi
Order: Diptera
None
1.16%
16.2
Zymobacter palmae
RISB1324
Vespa mandarinia
Order: Hymenoptera
None
11.13%
16.1
Acinetobacter sp. Marseille-Q1620
RISB2083
Aedes aegypti
Order: Diptera
axenic larvae cannot develop
0.45%
16.0
Acinetobacter sp. KCTC 92772
RISB2083
Aedes aegypti
Order: Diptera
axenic larvae cannot develop
0.26%
15.8
Bacillus thuringiensis
RISB0820
Simulium tani
Order: Diptera
show resistance to some antibiotics
0.01%
15.7
Providencia alcalifaciens
RISB1168
Bactrocera dorsalis
Order: Diptera
Promote the growth of larvae
0.12%
15.7
Microbacterium sp. H1-D42
RISB2095
Aedes aegypti
Order: Diptera
axenic larvae cannot develop
0.09%
15.7
Acetobacter
RISB0961
Drosophila melanogaster
Order: Diptera
The exist of Acetobacter had a balancing effect on food ingestion when carbohydrate levels were high in the warmer months, stabilizing fitness components of flies across the year.
1.45%
15.0
Erwinia aphidicola
RISB1705
Phlebotomus papatasi
Order: Diptera
None
0.02%
15.0
Buchnera aphidicola
RISB0051
Episyrphus balteatus
Order: Diptera
None
0.02%
15.0
Pectobacterium carotovorum
RISB1772
Muscidae
Order: Diptera
None
0.01%
15.0
Acetobacter
RISB0184
Drosophila melanogaster
Order: Diptera
enhancing the brain levels of tyrosine decarboxylase 2 (Tdc2), which is an enzyme that synthesizes octopamine (OA)
1.45%
13.7
Pseudomonas sp. CIP-10
RISB1622
Dendroctonus valens
Order: Coleoptera
volatiles from predominant bacteria regulate the consumption sequence of carbon sources d-pinitol and d-glucose in the fungal symbiont Leptographium procerum, and appear to alleviate the antagonistic effect from the fungus against RTB larvae
3.71%
13.5
Rhodococcus
RISB0775
Delia antiqua
Order: Diptera
showed significant contact inhibition activity against fungal entomopathogen Fusarium moniliforme, Botryosphaeria dothidea and both Fusarium oxysporum respectively
0.18%
13.4
Staphylococcus
RISB0427
Anopheles sinensis
Order: Diptera
be identified in each part of the hyperendemic area of this study has a potential role to interact with malaria parasites.
0.02%
12.5
Gluconobacter
RISB0016
Aedes aegypti
Order: Diptera
Gluconobacter might increase the susceptibility of Ae. aegypti to CHIKV infection.
0.58%
12.2
Proteus
RISB2315
Aedes aegypti
Order: Diptera
upregulates AMP gene expression, resulting in suppression of DENV infection in the mosquito gut epithelium
0.07%
12.2
Pseudomonas sp. CIP-10
RISB2224
Leptinotarsa decemlineata
Order: Coleoptera
Colorado potato beetle (Leptinotarsa decemlineata) larvae exploit bacteria in their oral secretions to suppress antiherbivore defenses in tomato (Solanum lycopersicum)
3.71%
12.1
Gluconobacter
RISB1882
Drosophila suzukii
Order: Diptera
produce volatile substances that attract female D. suzukii
0.58%
11.7
Dysgonomonas
RISB1235
Hermetia illucens
Order: Diptera
provides the tools for degrading of a broad range of substrates
0.01%
11.3
Escherichia coli
RISB1339
Manduca sexta
Order: Lepidoptera
modulate immunity-related gene expression in the infected F0 larvae, and also in their offspring, triggered immune responses in the infected host associated with shifts in both DNA methylation and histone acetylation
1.93%
11.3
Komagataeibacter
RISB1883
Drosophila suzukii
Order: Diptera
produce volatile substances that attract female D. suzukii
0.03%
11.2
Raoultella
RISB1575
Bactrocera tau
Order: Diptera
could attract male and female B. tau
0.10%
10.8
Cedecea
RISB1570
Bactrocera tau
Order: Diptera
could attract male and female B. tau
0.02%
10.7
Gluconobacter
RISB0876
Drosophila suzukii
Order: Diptera
None
0.58%
10.6
Aeromonas
RISB2086
Aedes aegypti
Order: Diptera
axenic larvae cannot develop
0.02%
10.6
Sphingobium
RISB1880
Aedes aegypti
Order: Diptera
gut microbiome
0.05%
10.3
Peribacillus
RISB1877
Aedes aegypti
Order: Diptera
gut microbiome
0.03%
10.3
Staphylococcus
RISB1881
Aedes aegypti
Order: Diptera
gut microbiome
0.02%
10.3
Pseudomonas sp. CIP-10
RISB0700
Nilaparvata lugens
Order: Hemiptera
Pseudomonas sp. composition and abundance correlated with BPH survivability
3.71%
10.2
Proteus
RISB0054
Episyrphus balteatus
Order: Diptera
None
0.07%
10.1
Variovorax
RISB1712
Phlebotomus papatasi
Order: Diptera
None
0.05%
10.1
Burkholderia gladioli
RISB1172
Lagria villosa
Order: Coleoptera
process a cryptic gene cluster that codes for the biosynthesis of a novel antifungal polyketide with a glutarimide pharmacophore, which led to the discovery of the gladiofungins as previously-overlooked components of the antimicrobial armory of the beetle symbiont
0.03%
10.0
Buchnera aphidicola
RISB0236
Acyrthosiphon pisum
Order: Hemiptera
Buchnera the nutritional endosymbiont of A. pisum is located inside of bacteriocytes and requires aspartate from the aphid host, because it cannot make it de novo. Further Buchnera needs aspartate for the biosynthesis of the essential amino acids lysine and threonine, which the aphid and Buchnera require for survival
0.02%
10.0
Buchnera aphidicola
RISB2485
Macrosiphum euphorbiae
Order: Hemiptera
symbiont expression patterns differ between aphid clones with differing levels of virulence, and are influenced by the aphids' host plant. Potentially, symbionts may contribute to differential adaptation of aphids to host plant resistance
0.02%
9.8
Escherichia coli
RISB0128
Tribolium castaneum
Order: Coleoptera
may produce 4,8-dimethyldecanal (DMD) production that is strongly associated with attraction to females and host pheromone communication
1.93%
9.7
Burkholderia gladioli
RISB1729
Lagria hirta
Order: Coleoptera
the symbionts inhibit the growth of antagonistic fungi on the eggs of the insect host, indicating that the Lagria-associated Burkholderia have evolved from plant pathogenic ancestors into insect defensive mutualists
0.03%
9.3
Streptomyces sp. WAC00303
RISB0943
Polybia plebeja
Order: Hymenoptera
this bacterium produces antimicrobial compounds that are active against Hirsutella citriformis, a natural fungal enemy of its host, and the human pathogens Staphylococcus aureus and Candida albicans
0.06%
9.0
Streptomyces sp. NBC_00239
RISB0943
Polybia plebeja
Order: Hymenoptera
this bacterium produces antimicrobial compounds that are active against Hirsutella citriformis, a natural fungal enemy of its host, and the human pathogens Staphylococcus aureus and Candida albicans
0.03%
9.0
Streptomyces sp. T12
RISB0943
Polybia plebeja
Order: Hymenoptera
this bacterium produces antimicrobial compounds that are active against Hirsutella citriformis, a natural fungal enemy of its host, and the human pathogens Staphylococcus aureus and Candida albicans
0.02%
9.0
Burkholderia gladioli
RISB1604
Lagria villosa
Order: Coleoptera
Bacteria produce icosalide, an unusual two-tailed lipocyclopeptide antibiotic,which is active against entomopathogenic bacteria, thus adding to the chemical armory protecting beetle offspring
0.03%
8.9
Salmonella enterica
RISB0413
Melanaphis sacchari
Order: Hemiptera
None
3.71%
8.7
Lactobacillus sp. ESL0785
RISB0292
Lymantria dispar asiatica
Order: Lepidoptera
Beauveria bassiana infection-based assays showed that the mortality of non-axenic L. dispar asiatica larvae was significantly higher than that of axenic larvae at 72 h.
0.23%
8.6
Candidatus Sodalis pierantonius
RISB2035
Sitophilus oryzae
Order: Coleoptera
endosymbiont dynamics parallels numerous transcriptional changes in weevil developing adults and affects several biological processes, including metabolism and development
0.01%
8.4
Candidatus Portiera aleyrodidarum
RISB1193
Bemisia tabaci
Order: Hemiptera
synthesizing essential amino acid (e.g. tryptophan, leucine and L-Isoleucine), Bemisia tabaci provides vital nutritional support for growth, development and reproduction
0.02%
8.4
Candidatus Portiera aleyrodidarum
RISB2289
Bemisia tabaci
Order: Hemiptera
encoding the capability to synthetize, or participate in the synthesis of, several amino acids and carotenoids,
0.02%
7.2
Candidatus Portiera aleyrodidarum
RISB1973
Bemisia tabaci
Order: Hemiptera
a primary symbiont, which compensates for the deficient nutritional composition of its food sources
0.02%
7.0
Candidatus Sodalis pierantonius
RISB0972
Sitophilus oryzae
Order: Coleoptera
produce vitamins and essential amino acids required for insect development and cuticle biosynthesis
0.01%
7.0
Leclercia adecarboxylata
RISB1757
Spodoptera frugiperda
Order: Lepidoptera
degradation of lambda-cyhalothrin, deltamethrin, chlorpyrifos ethyl, lufenuron and spinosyn
0.11%
6.9
Candidatus Sodalis pierantonius
RISB0251
Sitophilus oryzae
Order: Coleoptera
may infulence immunity, metabolism, metal control, apoptosis, and bacterial stress response
0.01%
6.8
Sphingomonas sp. CL5.1
RISB0134
Spodoptera frugiperda
Order: Lepidoptera
provide a protective effect to against chlorantraniliprole stress to S. frugiperda
0.19%
6.8
Erwinia sp. QL-Z3
RISB0808
Hypothenemus hampei
Order: Coleoptera
might contribute to caffeine breakdown using the C-12 oxidation pathway
0.07%
6.5
Leclercia adecarboxylata
RISB1758
Spodoptera frugiperda
Order: Lepidoptera
may influence the metabolization of pesticides in insects
0.11%
6.3
Erwinia sp. QL-Z3
RISB1986
Bombyx mori
Order: Lepidoptera
producing cellulase and amylase
0.07%
5.7
Halomonas
RISB1808
Monochamus galloprovincialis
Order: Coleoptera
Have the ability for degradation of cellulose, proteins and starch
3.78%
5.1
Candidatus Kirkpatrickella diaphorinae
RISB0222
Diaphorina citri
Order: Hemiptera
None
0.05%
5.1
Staphylococcus
RISB0945
Callosobruchus maculatus
Order: Coleoptera
The strain encodes complete biosynthetic pathways for the production of B vitamins and amino acids, including tyrosine; A carbohydrate-active enzyme search revealed that the genome codes for a number of digestive enzymes, reflecting the nutritional ecology of C. maculatus
0.02%
5.0
Candidatus Palibaumannia cicadellinicola
RISB1594
Graphocephala coccinea
Order: Hemiptera
None
0.01%
5.0
Rahnella
RISB1623
Dendroctonus valens
Order: Coleoptera
volatiles from predominant bacteria regulate the consumption sequence of carbon sources d-pinitol and d-glucose in the fungal symbiont Leptographium procerum, and appear to alleviate the antagonistic effect from the fungus against RTB larvae
0.16%
5.0
Clostridium
RISB2301
Pyrrhocoris apterus
Order: Hemiptera
could play an important role for the insect by degrading complex dietary components, providing nutrient supplementation, or detoxifying noxious chemicals (e.g. cyclopropenoic fatty acids or gossypol) in the diet
0.03%
4.3
Sphingobium
RISB1837
Dendroctonus valens
Order: Coleoptera
It can trongly degrade naringenin, and pinitol, the main soluble carbohydrate of P. tabuliformis, is retained in L. procerum-infected phloem and facilitate naringenin biodegradation by the microbiotas.
0.05%
4.1
Halomonas
RISB1374
Bemisia tabaci
Order: Hemiptera
None
3.78%
3.8
Yersinia
RISB0492
Cimex hemipterus
Order: Hemiptera
the disruption of the abundant Yersinia possibly could be related to the enhanced susceptibility towards the insecticides
1.05%
3.5
Raoultella
RISB2226
Leptinotarsa decemlineata
Order: Coleoptera
Colorado potato beetle (Leptinotarsa decemlineata) larvae exploit bacteria in their oral secretions to suppress antiherbivore defenses in tomato (Solanum lycopersicum)
0.10%
3.4
Yokenella
RISB1492
Nezara viridula
Order: Hemiptera
help stinkbugs to feed on soybean developing seeds in spite of its chemical defenses by degrading isoflavonoids and deactivate soybean protease inhibitors
0.12%
3.2
Proteus
RISB0001
Leptinotarsa decemlineata
Order: Coleoptera
produces toxic hydrogen cyanide (HCN) and a mandelonitrile-producing cyanoglucoside, amygdalin, which protect the insect from predation
0.07%
2.8
Vibrio
RISB1810
Monochamus galloprovincialis
Order: Coleoptera
Have the ability for degradation of cellulose, proteins and starch
1.29%
2.6
Nocardia
RISB0947
Acromyrmex
Order: Hymenoptera
Pseudonocardia in the Acromyrmex leaf-cutter ants as a protective partner against the entomopathogenic fungus Metarhizium
0.01%
2.4
Rahnella
RISB1800
Dendroctonus valens
Order: Coleoptera
could alleviate or compromise the antagonistic effects of fungi O. minus and L. procerum on RTB larval growth
0.16%
2.3
Rahnella
RISB0741
Dendroctonus ponderosae
Order: Coleoptera
R. aquatilis decreased (−)-α-pinene (38%) and (+)-α-pinene (46%) by 40% and 45% (by GC-MS), respectively
0.16%
2.2
Rhodococcus
RISB0430
Rhodnius prolixus
Order: Hemiptera
Rhodnius prolixus harbouring R. rhodnii developed faster, had higher survival, and laid more eggs
0.18%
2.1
Nocardia
RISB1218
Mycocepurus smithii
Order: Hymenoptera
produce secondary metabolites with antibiotic activity that protects the fungus garden against pathogens
0.01%
2.1
Rhizobium
RISB0135
Coccinella septempunctata
Order: Coleoptera
be commonly found in plant roots and they all have nitrogen fixation abilities
0.42%
2.0
Leuconostoc
RISB0812
Hypothenemus hampei
Order: Coleoptera
might contribute to caffeine breakdown using the C-18 oxidation pathway
0.29%
1.7
Bradyrhizobium
RISB0135
Coccinella septempunctata
Order: Coleoptera
be commonly found in plant roots and they all have nitrogen fixation abilities
0.05%
1.6
Kosakonia
RISB0810
Hypothenemus hampei
Order: Coleoptera
might contribute to caffeine breakdown using the C-16 oxidation pathway
0.04%
1.5
Raoultella
RISB1672
Spodoptera frugiperda
Order: Lepidoptera
downregulated POX but upregulated trypsin PI in this plant species
0.10%
1.4
Massilia
RISB2151
Osmia bicornis
Order: Hymenoptera
may be essential to support Osmia larvae in their nutrient uptake
0.07%
1.4
Variovorax
RISB2153
Osmia bicornis
Order: Hymenoptera
may be essential to support Osmia larvae in their nutrient uptake
0.05%
1.4
Rhodococcus
RISB1087
Rhodnius prolixus
Order: Hemiptera
supply enzymatic biosynthesis of B-complex vitamins
0.18%
1.2
Lysinibacillus
RISB1416
Psammotermes hypostoma
Order: Blattodea
isolates showed significant cellulolytic activity
0.13%
1.1
Clostridium
RISB0028
Sesamia inferens
Order: Lepidoptera
degrade Chlorpyrifos and Chlorantraniliprole in vitro
0.03%
1.1
Neokomagataea
RISB1560
Oecophylla smaragdina
Order: Hymenoptera
may be related with the formic acid production
0.15%
1.1
Dickeya
RISB1086
Rhodnius prolixus
Order: Hemiptera
supply enzymatic biosynthesis of B-complex vitamins
0.04%
1.1
Yersinia
RISB0407
Anaphes nitens
Order: Hymenoptera
None
1.05%
1.1
Cronobacter
RISB0247
Tenebrio molitor
Order: Coleoptera
may be indirectly involved in the digestion of PE
0.02%
1.0
Aeromonas
RISB2456
Bombyx mori
Order: Lepidoptera
able to utilize the CMcellulose and xylan
0.02%
0.8
Kosakonia
RISB1155
Tenebrio molitor
Order: Coleoptera
degrading plastics
0.04%
0.4
Aeromonas
RISB1145
Tenebrio molitor
Order: Coleoptera
degrading plastics
0.02%
0.4
Lysinibacillus
RISB1066
Oryctes rhinoceros
Order: Coleoptera
gut microbe
0.13%
0.4
Priestia
RISB0839
Helicoverpa armigera
Order: Lepidoptera
producing amylase
0.01%
0.4
Micromonospora
RISB2033
Palomena viridissima
Order: Hemiptera
None
0.35%
0.4
Cupriavidus
RISB0694
Alydus tomentosus
Order: Hemiptera
None
0.09%
0.1
Clostridium
RISB1959
Pyrrhocoridae
Order: Hemiptera
None
0.03%
0.0
Paraburkholderia
RISB0125
Physopelta gutta
Order: Hemiptera
None
0.03%
0.0
Cedecea
RISB0504
Plutella xylostella
Order: Lepidoptera
None
0.02%
0.0
Flavobacterium
RISB0659
Melanaphis bambusae
Order: Hemiptera
None
0.02%
0.0
Dysgonomonas
RISB1481
Brachinus elongatulus
Order: Coleoptera
None
0.01%
0.0

Download Files

Taxonomic Analysis Files

Kraken Report

Detailed taxonomic classification

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Krona HTML

Interactive taxonomic visualization

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Bracken Results

Species abundance estimation

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Assembly & Gene Prediction

Assembled Contigs

MEGAHIT assembly results

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Predicted Genes

Gene sequences (FASTA)

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Gene Annotation

GFF format annotation

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Genome Binning

MetaBAT2 Bins

Compressed genome bins

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Bin Information

Quality metrics and statistics

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR28387219
1.1 GB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

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