SRR28387216 - simuliidae
Basic Information
Run: SRR28387216
Assay Type: WGS
Bioproject: PRJNA1088476
Biosample: SAMN40472411
Bytes: 873247976
Center Name: KU LEUVEN
Sequencing Information
Instrument: Illumina NovaSeq 6000
Library Layout: PAIRED
Library Selection: RANDOM PCR
Platform: ILLUMINA
Quality Control Information
Filter Percentage: 0.0806
QC Average Length: 140
Retained Reads: 17131952
Geographic Information
Country: Cameroon
Continent: Africa
Location Name: Cameroon
Latitude/Longitude: 4.347925 N 11.635309 E
Sample Information
Taxonomic Classification
Potential Symbionts
About Potential Symbionts
This table shows potential symbiont identified in the metagenome sample. Matches are scored based on:
- Relative abundance in the sample
- Species-level matches with known symbionts
- Host insect order matches with reference records
- Completeness and richness of functional records
Based on our current records database, this section aims to identify potential functional symbionts in this metagenome sample, with scoring based on:
- Relative abundance in sample
- Species-level matches with known symbionts
- Host insect order matches
- Functional record completeness
Note: Showing top 3 highest scoring records for each species/genus
| Symbiont Name | Record | Host Species | Function | Abundance |
Score
Score Composition:
Higher scores indicate stronger symbiotic relationship potential |
|---|---|---|---|---|---|
|
Enterobacter sp. T2
Species-level Match
Host Order Match
|
RISB0893 |
Bactrocera dorsalis
Order: Diptera
|
be beneficial, with some quality control indices, such as adult size, pupal weight, survival rate under stress and nutritionally rich conditions, and mating competitiveness, being significantly increased, while slight nonsignificant increases in emergence rate and flight ability were observed
|
0.30% |
20.3
|
|
Klebsiella oxytoca
Species-level Match
Host Order Match
|
RISB0130 |
Ceratitis capitata
Order: Diptera
|
The intestinal microbiota structure was significantly influenced by the probiotic treatment while still maintaining a stable core dominant community of Enterobacteriacea. The colony with these microbiome had the most improved potential functions in terms of gut microbes as well as the carbohydrates active enzymes most improved potential functions.
|
0.02% |
20.0
|
|
Lactiplantibacillus plantarum
Species-level Match
Host Order Match
|
RISB0674 |
Drosophila melanogaster
Order: Diptera
|
could effectively inhibit fungal spore germinations
|
3.95% |
20.0
|
|
Enterobacter sp. T2
Species-level Match
Host Order Match
|
RISB1338 |
Ceratitis capitata
Order: Diptera
|
Enterobacter sp. AA26 dry biomass can fully replace the brewer’s yeast as a protein source in medfly larval diet without any effect on the productivity and the biological quality of reared medfly of VIENNA 8 GSS
|
0.30% |
19.5
|
|
Citrobacter sp. RHBSTW-00599
Species-level Match
Host Order Match
|
RISB1503 |
Bactrocera dorsalis
Order: Diptera
|
Pesticide-degrading bacteria were frequently detected from pesticide-resistant insects. Susceptible insects became resistant after inoculation of the pesticide-degrading symbiont
|
0.60% |
19.2
|
|
Stenotrophomonas maltophilia
Species-level Match
Host Order Match
|
RISB1227 |
Delia antiqua
Order: Diptera
|
six bacteria protect larvae from infection with the entomopathogen Beauveria bassiana through symbiotic bacterium-derived organic acids
|
1.39% |
19.1
|
|
Lactiplantibacillus plantarum
Species-level Match
Host Order Match
|
RISB0608 |
Drosophila melanogaster
Order: Diptera
|
None
|
3.95% |
19.0
|
|
Klebsiella michiganensis
Species-level Match
Host Order Match
|
RISB1052 |
Bactrocera dorsalis
Order: Diptera
|
K. michiganensis BD177 has the strain-specific ability to provide three essential amino acids (phenylalanine, tryptophan and methionine) and two vitamins B (folate and riboflavin) to B. dorsalis
|
0.02% |
18.9
|
|
Serratia marcescens
Species-level Match
Host Order Match
|
RISB1291 |
Aedes aegypti
Order: Diptera
|
facilitates arboviral infection through a secreted protein named SmEnhancin, which digests membrane-bound mucins on the mosquito gut epithelia, thereby enhancing viral dissemination.
|
0.17% |
18.8
|
|
Citrobacter freundii
Species-level Match
Host Order Match
|
RISB1221 |
Delia antiqua
Order: Diptera
|
six bacteria protect larvae from infection with the entomopathogen Beauveria bassiana through symbiotic bacterium-derived organic acids
|
1.01% |
18.7
|
|
Citrobacter sp. C1
Species-level Match
Host Order Match
|
RISB1503 |
Bactrocera dorsalis
Order: Diptera
|
Pesticide-degrading bacteria were frequently detected from pesticide-resistant insects. Susceptible insects became resistant after inoculation of the pesticide-degrading symbiont
|
0.10% |
18.7
|
|
Morganella morganii
Species-level Match
Host Order Match
|
RISB0772 |
Delia antiqua
Order: Diptera
|
showed significant volatile inhibition activity against fungal entomopathogen Fusarium moniliforme, Botryosphaeria dothidea and both Fusarium oxysporum respectively
|
0.04% |
18.3
|
|
Paenibacillus sp. FSL H8-0332
Species-level Match
Host Order Match
|
RISB0774 |
Delia antiqua
Order: Diptera
|
showed significant contact inhibition activity against fungal entomopathogen Fusarium moniliforme, Botryosphaeria dothidea and both Fusarium oxysporum respectively
|
0.02% |
18.3
|
|
Klebsiella oxytoca
Species-level Match
Host Order Match
|
RISB1139 |
Musca domestica
Order: Diptera
|
It is associated to newly laid housefly eggs, where it is deposited by the female, and has a role in oviposition as well as protection against potential pathogens
|
0.02% |
18.3
|
|
Stenotrophomonas maltophilia
Species-level Match
Host Order Match
|
RISB1141 |
Hermetia illucens
Order: Diptera
|
enhance the insect growth performance when reared on an unbalanced nutritionally poor diet
|
1.39% |
18.2
|
|
Morganella morganii
Species-level Match
Host Order Match
|
RISB0008 |
Phormia regina
Order: Diptera
|
deterred oviposition by female stable flies; The flies' oviposition decisions appear to be guided by bacteria-derived semiochemicals as the bacteria
|
0.04% |
18.0
|
|
Serratia marcescens
Species-level Match
Host Order Match
|
RISB0009 |
Phormia regina
Order: Diptera
|
prompted oviposition by flies; The flies' oviposition decisions appear to be guided by bacteria-derived semiochemicals as the bacteria
|
0.17% |
17.9
|
|
Enterobacter ludwigii
Species-level Match
Host Order Match
|
RISB1223 |
Delia antiqua
Order: Diptera
|
six bacteria protect larvae from infection with the entomopathogen Beauveria bassiana through symbiotic bacterium-derived organic acids
|
0.03% |
17.7
|
|
Stenotrophomonas maltophilia
Species-level Match
Host Order Match
|
RISB1401 |
Delia antiqua
Order: Diptera
|
suppressed Beauveria bassiana conidia germination and hyphal growth
|
1.39% |
17.7
|
|
Serratia sp. JSRIV004
Species-level Match
Host Order Match
|
RISB1516 |
Anopheles stephensi
Order: Diptera
|
produce lipodepsipeptides, stephensiolides A-K, that have antibiotic activity and facilitate bacterial surface motility.
|
0.08% |
17.5
|
|
Psychrobacter sp. LV10R520-6
Species-level Match
Host Order Match
|
RISB1773 |
Calliphoridae
Order: Diptera
|
it shows physiological adaptation to survival in warmer temperatures and has been previously associated with food spoilage
|
0.02% |
17.5
|
|
Psychrobacter sp. P11G3
Species-level Match
Host Order Match
|
RISB1773 |
Calliphoridae
Order: Diptera
|
it shows physiological adaptation to survival in warmer temperatures and has been previously associated with food spoilage
|
0.01% |
17.5
|
|
Morganella morganii
Species-level Match
Host Order Match
|
RISB0611 |
Bactrocera dorsalis
Order: Diptera
|
may hydrolysing nitrogenous waste and providing metabolizable nitrogen for B. dorsalis
|
0.04% |
16.8
|
|
Pantoea dispersa
Species-level Match
Host Order Match
|
RISB1413 |
Bactrocera dorsalis
Order: Diptera
|
causing female Bactrocera dorsalis laid more eggs but had shorter lifespan
|
0.04% |
16.5
|
|
Acetobacter
Host Order Match
|
RISB1865 |
Drosophila melanogaster
Order: Diptera
|
The bacterial cells may thus be able to ameliorate the pH of the acidic region, by the release of weak bases.Additionally, the bacteria have a complex relationship with physiological processes which may affect ionic homeostasis in the gut, such as nutrition and immune function
|
1.38% |
16.4
|
|
Bacillus cereus
Species-level Match
Host Order Match
|
RISB1872 |
Aedes aegypti
Order: Diptera
|
gut microbiome
|
0.94% |
16.2
|
|
Asaia
Host Order Match
|
RISB0854 |
Anopheles stephensi
Order: Diptera
|
Two complete operons encoding cytochrome bo3-type ubiquinol terminal oxidases (cyoABCD-1 and cyoABCD-2) were found in most Asaia genomes, possibly offering alternative terminal oxidases and allowing the flexible transition of respiratory pathways. Genes involved in the production of 2,3-butandiol and inositol have been found in Asaia sp. W12, possibly contributing to biofilm formation and stress tolerance.
|
1.12% |
16.1
|
|
Cedecea lapagei
Species-level Match
Host Order Match
|
RISB1570 |
Bactrocera tau
Order: Diptera
|
could attract male and female B. tau
|
0.25% |
16.0
|
|
Bacillus cereus
Species-level Match
Host Order Match
|
RISB1701 |
Phlebotomus papatasi
Order: Diptera
|
None
|
0.94% |
15.9
|
|
Escherichia coli
Species-level Match
Host Order Match
|
RISB1769 |
Calliphoridae
Order: Diptera
|
None
|
0.79% |
15.8
|
|
Providencia sp. PROV188
Species-level Match
Host Order Match
|
RISB1574 |
Bactrocera tau
Order: Diptera
|
could attract male and female B. tau
|
0.02% |
15.7
|
|
Bacillus thuringiensis
Species-level Match
Host Order Match
|
RISB0820 |
Simulium tani
Order: Diptera
|
show resistance to some antibiotics
|
0.02% |
15.7
|
|
Acinetobacter sp. WY4
Species-level Match
Host Order Match
|
RISB2083 |
Aedes aegypti
Order: Diptera
|
axenic larvae cannot develop
|
0.07% |
15.6
|
|
Paenibacillus sp. FSL H8-0332
Species-level Match
Host Order Match
|
RISB2098 |
Aedes aegypti
Order: Diptera
|
axenic larvae cannot develop
|
0.02% |
15.6
|
|
Acinetobacter sp. C32I
Species-level Match
Host Order Match
|
RISB2083 |
Aedes aegypti
Order: Diptera
|
axenic larvae cannot develop
|
0.02% |
15.6
|
|
Chryseobacterium sp.
Species-level Match
Host Order Match
|
RISB2092 |
Aedes aegypti
Order: Diptera
|
axenic larvae cannot develop
|
0.02% |
15.6
|
|
Erwinia aphidicola
Species-level Match
Host Order Match
|
RISB1705 |
Phlebotomus papatasi
Order: Diptera
|
None
|
0.48% |
15.5
|
|
Pantoea sp. X85
Species-level Match
Host Order Match
|
RISB1708 |
Phlebotomus papatasi
Order: Diptera
|
None
|
0.46% |
15.5
|
|
Pantoea sp. MT58
Species-level Match
Host Order Match
|
RISB1708 |
Phlebotomus papatasi
Order: Diptera
|
None
|
0.09% |
15.1
|
|
Buchnera aphidicola
Species-level Match
Host Order Match
|
RISB0051 |
Episyrphus balteatus
Order: Diptera
|
None
|
0.07% |
15.1
|
|
Enterococcus
Host Order Match
|
RISB0948 |
Drosophila
Order: Diptera
|
Enterococcus dramatically diminished or even completely reversed the ovipositional avoidance of alkalinity in Drosophila. Mechanistically, Enterococcus generate abundant lactate during fermentation, which neutralizes the residual alkali in an egg-laying substrate.
|
0.03% |
15.0
|
|
Wolbachia
Host Order Match
|
RISB0766 |
Aedes fluviatilis
Order: Diptera
|
The presence of Wolbachia pipientis improves energy performance in A. fluviatilis cells; it affects the regulation of key energy sources such as lipids, proteins, and carbohydrates, making the distribution of actin more peripheral and with extensions that come into contact with neighboring cells.
|
0.02% |
15.0
|
|
Acetobacter
Host Order Match
|
RISB0961 |
Drosophila melanogaster
Order: Diptera
|
The exist of Acetobacter had a balancing effect on food ingestion when carbohydrate levels were high in the warmer months, stabilizing fitness components of flies across the year.
|
1.38% |
15.0
|
|
Wolbachia
Host Order Match
|
RISB0779 |
Drosophila melanogaster
Order: Diptera
|
Wolbachia infection affects differential gene expression in Drosophila testis.Genes involved in carbohydrate metabolism, lysosomal degradation, proteolysis, lipid metabolism, and immune response were upregulated in the presence of Wolbachia
|
0.02% |
14.8
|
|
Wolbachia
Host Order Match
|
RISB1408 |
Anastrepha fraterculus
Order: Diptera
|
Wolbachia is the only known reproductive symbiont present in these morphotypes. Wolbachia reduced the ability for embryonic development in crosses involving cured females and infected males within each morphotype (uni-directional CI).
|
0.02% |
14.7
|
|
Asaia
Host Order Match
|
RISB0014 |
Aedes aegypti
Order: Diptera
|
The bacterium Asaia is considered a highly promising candidate for arboviral control in Aedes mosquitoes.Asaia could play a role in inhibiting CHIKV within Ae. aegypti.
|
1.12% |
14.5
|
|
Asaia
Host Order Match
|
RISB2533 |
Anopheles stephensi
Order: Diptera
|
Asaia sp. strain effectively lodged in the female gut and salivary glands, sites that are crucial for Plasmodium sp. development and transmission
|
1.12% |
14.0
|
|
Acetobacter
Host Order Match
|
RISB0184 |
Drosophila melanogaster
Order: Diptera
|
enhancing the brain levels of tyrosine decarboxylase 2 (Tdc2), which is an enzyme that synthesizes octopamine (OA)
|
1.38% |
13.7
|
|
Arthrobacter
Host Order Match
|
RISB0769 |
Delia antiqua
Order: Diptera
|
showed significant volatile inhibition activity against fungal entomopathogen Fusarium moniliforme, Botryosphaeria dothidea and both Fusarium oxysporum respectively
|
0.01% |
13.3
|
|
Enterococcus
Host Order Match
|
RISB0949 |
Drosophila
Order: Diptera
|
Enterococcus protects Drosophila from alkali stress by acidifying the ovipositional substrate, and ultimately improves the fitness of the Drosophila population
|
0.03% |
13.2
|
|
Enterococcus
Host Order Match
|
RISB0112 |
Bactrocera dorsalis
Order: Diptera
|
increase the resistance of B. dorsalis to β-cypermethrin by regulating cytochrome P450 (P450) enzymes and α-glutathione S-transferase (GST) activities
|
0.03% |
13.0
|
|
Sphingobacterium
Host Order Match
|
RISB1226 |
Delia antiqua
Order: Diptera
|
six bacteria protect larvae from infection with the entomopathogen Beauveria bassiana through symbiotic bacterium-derived organic acids
|
0.02% |
12.7
|
|
Comamonas
Host Order Match
|
RISB2021 |
Bactrocera dorsalis
Order: Diptera
|
This group in the immature stages may be helping the insects to cope with oxidative stress by supplementing available oxygen.
|
0.10% |
12.6
|
|
Gluconobacter
Host Order Match
|
RISB0016 |
Aedes aegypti
Order: Diptera
|
Gluconobacter might increase the susceptibility of Ae. aegypti to CHIKV infection.
|
0.46% |
12.1
|
|
Arthrobacter
Host Order Match
|
RISB1084 |
Hermetia illucens
Order: Diptera
|
Arthrobacter AK19 doubled the growth rate of larvae and increased the waste conversion by 25-30%
|
0.01% |
11.9
|
|
Arsenophonus
Host Order Match
|
RISB1141 |
Hermetia illucens
Order: Diptera
|
enhance the insect growth performance when reared on an unbalanced nutritionally poor diet
|
0.02% |
11.8
|
|
Gluconobacter
Host Order Match
|
RISB1882 |
Drosophila suzukii
Order: Diptera
|
produce volatile substances that attract female D. suzukii
|
0.46% |
11.6
|
|
Komagataeibacter
Host Order Match
|
RISB1883 |
Drosophila suzukii
Order: Diptera
|
produce volatile substances that attract female D. suzukii
|
0.21% |
11.4
|
|
Sphingobacterium
Host Order Match
|
RISB1400 |
Delia antiqua
Order: Diptera
|
suppressed Beauveria bassiana conidia germination and hyphal growth
|
0.02% |
11.4
|
|
Photorhabdus
Host Order Match
|
RISB0532 |
Drosophila melanogaster
Order: Diptera
|
produces toxin complex (Tc) toxins as major virulence factors
|
0.04% |
11.3
|
|
Pseudomonas sp. CIP-10
Species-level Match
|
RISB1622 |
Dendroctonus valens
Order: Coleoptera
|
volatiles from predominant bacteria regulate the consumption sequence of carbon sources d-pinitol and d-glucose in the fungal symbiont Leptographium procerum, and appear to alleviate the antagonistic effect from the fungus against RTB larvae
|
1.12% |
10.9
|
|
Arsenophonus
Host Order Match
|
RISB1173 |
Melophagus ovinus
Order: Diptera
|
participation of symbionts on blood-digestion
|
0.02% |
10.9
|
|
Raoultella
Host Order Match
|
RISB1575 |
Bactrocera tau
Order: Diptera
|
could attract male and female B. tau
|
0.14% |
10.9
|
|
Gluconobacter
Host Order Match
|
RISB0876 |
Drosophila suzukii
Order: Diptera
|
None
|
0.46% |
10.5
|
|
Comamonas
Host Order Match
|
RISB1875 |
Aedes aegypti
Order: Diptera
|
gut microbiome
|
0.10% |
10.4
|
|
Pseudomonas sp. DTU_2021_1001937_2_SI_NGA_ILE_001
Species-level Match
|
RISB1622 |
Dendroctonus valens
Order: Coleoptera
|
volatiles from predominant bacteria regulate the consumption sequence of carbon sources d-pinitol and d-glucose in the fungal symbiont Leptographium procerum, and appear to alleviate the antagonistic effect from the fungus against RTB larvae
|
0.53% |
10.4
|
|
Peribacillus
Host Order Match
|
RISB1877 |
Aedes aegypti
Order: Diptera
|
gut microbiome
|
0.04% |
10.3
|
|
Staphylococcus gallinarum
Species-level Match
|
RISB0945 |
Callosobruchus maculatus
Order: Coleoptera
|
The strain encodes complete biosynthetic pathways for the production of B vitamins and amino acids, including tyrosine; A carbohydrate-active enzyme search revealed that the genome codes for a number of digestive enzymes, reflecting the nutritional ecology of C. maculatus
|
0.14% |
10.1
|
|
Burkholderia gladioli
Species-level Match
|
RISB1172 |
Lagria villosa
Order: Coleoptera
|
process a cryptic gene cluster that codes for the biosynthesis of a novel antifungal polyketide with a glutarimide pharmacophore, which led to the discovery of the gladiofungins as previously-overlooked components of the antimicrobial armory of the beetle symbiont
|
0.13% |
10.1
|
|
Escherichia coli
Species-level Match
|
RISB1339 |
Manduca sexta
Order: Lepidoptera
|
modulate immunity-related gene expression in the infected F0 larvae, and also in their offspring, triggered immune responses in the infected host associated with shifts in both DNA methylation and histone acetylation
|
0.79% |
10.1
|
|
Comamonas
Host Order Match
|
RISB2020 |
Bactrocera dorsalis
Order: Diptera
|
None
|
0.10% |
10.1
|
|
Buchnera aphidicola
Species-level Match
|
RISB0236 |
Acyrthosiphon pisum
Order: Hemiptera
|
Buchnera the nutritional endosymbiont of A. pisum is located inside of bacteriocytes and requires aspartate from the aphid host, because it cannot make it de novo. Further Buchnera needs aspartate for the biosynthesis of the essential amino acids lysine and threonine, which the aphid and Buchnera require for survival
|
0.07% |
10.1
|
|
Variovorax
Host Order Match
|
RISB1712 |
Phlebotomus papatasi
Order: Diptera
|
None
|
0.03% |
10.0
|
|
Arsenophonus
Host Order Match
|
RISB1853 |
Lipoptena cervi
Order: Diptera
|
None
|
0.02% |
10.0
|
|
Pseudomonas sp. MTM4
Species-level Match
|
RISB1622 |
Dendroctonus valens
Order: Coleoptera
|
volatiles from predominant bacteria regulate the consumption sequence of carbon sources d-pinitol and d-glucose in the fungal symbiont Leptographium procerum, and appear to alleviate the antagonistic effect from the fungus against RTB larvae
|
0.04% |
9.9
|
|
Buchnera aphidicola
Species-level Match
|
RISB2485 |
Macrosiphum euphorbiae
Order: Hemiptera
|
symbiont expression patterns differ between aphid clones with differing levels of virulence, and are influenced by the aphids' host plant. Potentially, symbionts may contribute to differential adaptation of aphids to host plant resistance
|
0.07% |
9.8
|
|
Acinetobacter sp. WY4
Species-level Match
|
RISB0730 |
Curculio chinensis
Order: Coleoptera
|
Acinetobacter sp. in C. chinensis enriched after treating with saponin, and when incubating bacteria with saponin for 72 h, saponin content significantly decreased from 4.054 to 1.867 mg/mL (by 16S rRNA metagenome sequencing and HPLC)
|
0.07% |
9.8
|
|
Burkholderia gladioli
Species-level Match
|
RISB1729 |
Lagria hirta
Order: Coleoptera
|
the symbionts inhibit the growth of antagonistic fungi on the eggs of the insect host, indicating that the Lagria-associated Burkholderia have evolved from plant pathogenic ancestors into insect defensive mutualists
|
0.13% |
9.4
|
|
Staphylococcus xylosus
Species-level Match
|
RISB2497 |
Anticarsia gemmatalis
Order: Lepidoptera
|
allow the adaptation of this insect to plants rich in protease inhibitors, minimizing the potentially harmful consequences of protease inhibitors from some of this insect host plants, such as soybean
|
0.26% |
9.2
|
|
Clostridium sp. JN-1
Species-level Match
|
RISB2301 |
Pyrrhocoris apterus
Order: Hemiptera
|
could play an important role for the insect by degrading complex dietary components, providing nutrient supplementation, or detoxifying noxious chemicals (e.g. cyclopropenoic fatty acids or gossypol) in the diet
|
0.02% |
9.2
|
|
Streptomyces sp. WAC00303
Species-level Match
|
RISB0943 |
Polybia plebeja
Order: Hymenoptera
|
this bacterium produces antimicrobial compounds that are active against Hirsutella citriformis, a natural fungal enemy of its host, and the human pathogens Staphylococcus aureus and Candida albicans
|
0.07% |
9.0
|
|
Streptomyces sp. NBC_00190
Species-level Match
|
RISB0943 |
Polybia plebeja
Order: Hymenoptera
|
this bacterium produces antimicrobial compounds that are active against Hirsutella citriformis, a natural fungal enemy of its host, and the human pathogens Staphylococcus aureus and Candida albicans
|
0.02% |
9.0
|
|
Streptomyces sp. GQFP
Species-level Match
|
RISB0943 |
Polybia plebeja
Order: Hymenoptera
|
this bacterium produces antimicrobial compounds that are active against Hirsutella citriformis, a natural fungal enemy of its host, and the human pathogens Staphylococcus aureus and Candida albicans
|
0.01% |
9.0
|
|
Burkholderia gladioli
Species-level Match
|
RISB1604 |
Lagria villosa
Order: Coleoptera
|
Bacteria produce icosalide, an unusual two-tailed lipocyclopeptide antibiotic,which is active against entomopathogenic bacteria, thus adding to the chemical armory protecting beetle offspring
|
0.13% |
9.0
|
|
Sodalis praecaptivus
Species-level Match
|
RISB0122 |
Nezara viridula
Order: Hemiptera
|
plays an important role in interactions between insects and plants and could therefore be considered a valuable target for the development of sustainable pest control strategies.
|
0.36% |
8.9
|
|
Escherichia coli
Species-level Match
|
RISB0128 |
Tribolium castaneum
Order: Coleoptera
|
may produce 4,8-dimethyldecanal (DMD) production that is strongly associated with attraction to females and host pheromone communication
|
0.79% |
8.5
|
|
Sodalis praecaptivus
Species-level Match
|
RISB1718 |
Sitophilus zeamais
Order: Coleoptera
|
we investigated the role of a quorum sensing(QS ) system in S. praecaptivus and found that it negatively regulates a potent insect-killing phenotype
|
0.36% |
8.3
|
|
Blattabacterium cuenoti
Species-level Match
|
RISB0133 |
Panesthiinae
Order: Blattodea
|
enables hosts to subsist on a nutrient-poor diet; endosymbiont genome erosions are associated with repeated host transitions to an underground life
|
0.02% |
8.0
|
|
Proteus vulgaris
Species-level Match
|
RISB0001 |
Leptinotarsa decemlineata
Order: Coleoptera
|
produces toxic hydrogen cyanide (HCN) and a mandelonitrile-producing cyanoglucoside, amygdalin, which protect the insect from predation
|
0.08% |
7.8
|
|
Staphylococcus gallinarum
Species-level Match
|
RISB0946 |
Callosobruchus maculatus
Order: Coleoptera
|
The strain encodes complete biosynthetic pathways for the production of B vitamins and amino acids, including tyrosine
|
0.14% |
7.5
|
|
Leclercia adecarboxylata
Species-level Match
|
RISB1757 |
Spodoptera frugiperda
Order: Lepidoptera
|
degradation of lambda-cyhalothrin, deltamethrin, chlorpyrifos ethyl, lufenuron and spinosyn
|
0.05% |
6.9
|
|
Erwinia sp. HDF1-3R
Species-level Match
|
RISB0808 |
Hypothenemus hampei
Order: Coleoptera
|
might contribute to caffeine breakdown using the C-12 oxidation pathway
|
0.03% |
6.5
|
|
Erwinia sp. E602
Species-level Match
|
RISB0808 |
Hypothenemus hampei
Order: Coleoptera
|
might contribute to caffeine breakdown using the C-12 oxidation pathway
|
0.01% |
6.4
|
|
Paenibacillus sp. FSL H8-0332
Species-level Match
|
RISB0813 |
Hypothenemus hampei
Order: Coleoptera
|
might contribute to caffeine breakdown using the C-9 oxidation pathway
|
0.02% |
6.4
|
|
Leclercia adecarboxylata
Species-level Match
|
RISB1758 |
Spodoptera frugiperda
Order: Lepidoptera
|
may influence the metabolization of pesticides in insects
|
0.05% |
6.2
|
|
Proteus vulgaris
Species-level Match
|
RISB2460 |
Bombyx mori
Order: Lepidoptera
|
degradation of cellulose, xylan, pectin and starch
|
0.08% |
6.1
|
|
Zymobacter palmae
Species-level Match
|
RISB1324 |
Vespa mandarinia
Order: Hymenoptera
|
None
|
0.78% |
5.8
|
|
Providencia sp. PROV188
Species-level Match
|
RISB0984 |
Nasonia vitripennis
Order: Hymenoptera
|
may highly associated with diapause
|
0.02% |
5.7
|
|
Blattabacterium cuenoti
Species-level Match
|
RISB0518 |
Cryptocercus punctulatus
Order: Blattodea
|
collaborative arginine biosynthesis
|
0.02% |
5.7
|
|
Salmonella enterica
Species-level Match
|
RISB0413 |
Melanaphis sacchari
Order: Hemiptera
|
None
|
0.65% |
5.7
|
|
Blattabacterium cuenoti
Species-level Match
|
RISB0093 |
Blattella germanica
Order: Blattodea
|
obligate endosymbiont
|
0.02% |
5.4
|
|
Cedecea lapagei
Species-level Match
|
RISB0504 |
Plutella xylostella
Order: Lepidoptera
|
None
|
0.25% |
5.3
|
|
Oecophyllibacter saccharovorans
Species-level Match
|
RISB1194 |
Oecophylla smaragdina
Order: Hymenoptera
|
None
|
0.18% |
5.2
|
|
Formicincola oecophyllae
Species-level Match
|
RISB0578 |
Oecophylla smaragdina
Order: Hymenoptera
|
None
|
0.17% |
5.2
|
|
Candidatus Kirkpatrickella diaphorinae
Species-level Match
|
RISB0222 |
Diaphorina citri
Order: Hemiptera
|
None
|
0.09% |
5.1
|
|
Zymomonas mobilis
Species-level Match
|
RISB1326 |
Vespa mandarinia
Order: Hymenoptera
|
None
|
0.02% |
5.0
|
|
Rhodobacter
|
RISB0138 |
Coccinella septempunctata
Order: Coleoptera
|
Rhodanobacter genera can utilize various carbon sources, including cellobiose. In larvae of longhorned beetles that feed on plants rich in carbohydrates (cellulose and hemicellulose) and lignin, Rhodanobacter can help the larvae digest more carbon nutrients through carbon sequestration
|
0.02% |
5.0
|
|
Agrobacterium tumefaciens
Species-level Match
|
RISB0650 |
Melanaphis bambusae
Order: Hemiptera
|
None
|
0.01% |
5.0
|
|
Lactobacillus apis
Species-level Match
|
RISB1556 |
Apis florea
Order: Hymenoptera
|
None
|
0.01% |
5.0
|
|
Photorhabdus
|
RISB2532 |
Manduca sexta
Order: Lepidoptera
|
produces a small-molecule antibiotic (E)-1,3-dihydroxy-2-(isopropyl)-5-(2-phenylethenyl)benzene (ST) that also acts as an inhibitor of phenoloxidase (PO) in the insect host Manduca sexta.
|
0.04% |
3.8
|
|
Xanthomonas
|
RISB0498 |
Xylocopa appendiculata
Order: Hymenoptera
|
Xanthomonas strain from Japanese carpenter bee is effective PU-degradable bacterium and is able to use polyacryl-based PU as a nutritional source, as well as other types of PS-PU and PE-PU
|
0.02% |
3.8
|
|
Raoultella
|
RISB2226 |
Leptinotarsa decemlineata
Order: Coleoptera
|
Colorado potato beetle (Leptinotarsa decemlineata) larvae exploit bacteria in their oral secretions to suppress antiherbivore defenses in tomato (Solanum lycopersicum)
|
0.14% |
3.5
|
|
Symbiopectobacterium
|
RISB1889 |
Pseudococcus longispinus
Order: Hemiptera
|
a nested symbiotic arrangement, where one bacterium lives inside another bacterium,occurred in building the mosaic metabolic pathways seen in mitochondria and plastids
|
0.03% |
3.4
|
|
Sphingobacterium
|
RISB2227 |
Leptinotarsa decemlineata
Order: Coleoptera
|
Colorado potato beetle (Leptinotarsa decemlineata) larvae exploit bacteria in their oral secretions to suppress antiherbivore defenses in tomato (Solanum lycopersicum)
|
0.02% |
3.4
|
|
Amycolatopsis
|
RISB0483 |
Trachymyrmex smithi
Order: Hymenoptera
|
inhibited the growth of Pseudonocardia symbionts under laboratory conditions. The novel analog nocamycin V from the strain was identified as the antibacterial compound
|
0.02% |
3.4
|
|
Amycolatopsis
|
RISB0199 |
Trachymyrmex
Order: Hymenoptera
|
produce antibiotic EC0-0501 that has strong activity against ant-associated Actinobacteria and may also play a role in bacterial competition in this niche
|
0.02% |
3.1
|
|
Bartonella
|
RISB1673 |
Apis mellifera
Order: Hymenoptera
|
a gut symbiont of insects and that the adaptation to blood-feeding insects facilitated colonization of the mammalian bloodstream
|
0.25% |
2.8
|
|
Photorhabdus
|
RISB2573 |
Manduca sexta
Order: Lepidoptera
|
the bacteria are symbiotic with entomopathogenic nematodes but become pathogenic on release from the nematode into the insect blood system
|
0.04% |
2.8
|
|
Yersinia
|
RISB0492 |
Cimex hemipterus
Order: Hemiptera
|
the disruption of the abundant Yersinia possibly could be related to the enhanced susceptibility towards the insecticides
|
0.10% |
2.5
|
|
Nocardia
|
RISB0947 |
Acromyrmex
Order: Hymenoptera
|
Pseudonocardia in the Acromyrmex leaf-cutter ants as a protective partner against the entomopathogenic fungus Metarhizium
|
0.03% |
2.5
|
|
Halomonas
|
RISB1808 |
Monochamus galloprovincialis
Order: Coleoptera
|
Have the ability for degradation of cellulose, proteins and starch
|
1.09% |
2.4
|
|
Bacteroides
|
RISB0256 |
Leptocybe invasa
Order: Hymenoptera
|
Differences in Male-Killing Rickettsia Bacteria between Lineages of the Invasive Gall-Causing Pest Leptocybe invasa
|
0.08% |
2.4
|
|
Bacteroides
|
RISB0090 |
Hyphantria cunea
Order: Lepidoptera
|
enhance the compatibility of invasive pests to new hosts and enable more rapid adaptation to new habitats.
|
0.08% |
2.2
|
|
Bacteroides
|
RISB1183 |
Oryzaephilus surinamensis
Order: Coleoptera
|
supplement precursors for the cuticle synthesis and thereby enhance desiccation resistance of its host
|
0.08% |
2.1
|
|
Nocardia
|
RISB1218 |
Mycocepurus smithii
Order: Hymenoptera
|
produce secondary metabolites with antibiotic activity that protects the fungus garden against pathogens
|
0.03% |
2.1
|
|
Streptococcus
|
RISB2625 |
Galleria mellonella
Order: Lepidoptera
|
suppress bacteria ingested with food by producing bacteriocin and by releasing a lysozyme like enzyme
|
0.06% |
2.1
|
|
Sphingomonas
|
RISB0420 |
Aphis gossypii
Order: Hemiptera
|
Sphingomonas could mediate A. gossypii resistance to imidacloprid by hydroxylation and nitroreduction
|
0.01% |
2.0
|
|
Cronobacter
|
RISB0247 |
Tenebrio molitor
Order: Coleoptera
|
may be indirectly involved in the digestion of PE
|
1.03% |
2.0
|
|
Xanthomonas
|
RISB0217 |
Xylocopa appendiculata
Order: Hymenoptera
|
strains biodegraded polyethylene terephthalate PET powder, broke it into its degradation products
|
0.02% |
2.0
|
|
Corynebacterium
|
RISB0363 |
Pagiophloeus tsushimanus
Order: Coleoptera
|
terpenoid-degrading: the highest degradation rates of D-camphor, linalool, and eucalyptol
|
0.11% |
1.9
|
|
Sphingomonas
|
RISB1307 |
Aphis gossypii
Order: Hemiptera
|
have been previously described in associations with phloem-feeding insects, in low abundances
|
0.01% |
1.9
|
|
Arthrobacter
|
RISB1753 |
Spodoptera frugiperda
Order: Lepidoptera
|
degradation of lambda-cyhalothrin, deltamethrin, chlorpyrifos ethyl, lufenuron and spinosyn
|
0.01% |
1.8
|
|
Corynebacterium
|
RISB0531 |
Helicoverpa armigera
Order: Lepidoptera
|
Corynebacterium sp. 2-TD, mediates the toxicity of the 2-tridecanone to H. armigera
|
0.11% |
1.8
|
|
Streptococcus
|
RISB2624 |
Reticulitermes flavipes
Order: Blattodea
|
can be broken down into substances such as carbon dioxide, ammonia and acetic acid
|
0.06% |
1.7
|
|
Sphingomonas
|
RISB0134 |
Spodoptera frugiperda
Order: Lepidoptera
|
provide a protective effect to against chlorantraniliprole stress to S. frugiperda
|
0.01% |
1.7
|
|
Vibrio
|
RISB1810 |
Monochamus galloprovincialis
Order: Coleoptera
|
Have the ability for degradation of cellulose, proteins and starch
|
0.33% |
1.7
|
|
Leuconostoc
|
RISB0812 |
Hypothenemus hampei
Order: Coleoptera
|
might contribute to caffeine breakdown using the C-18 oxidation pathway
|
0.19% |
1.6
|
|
Rhizobium
|
RISB0135 |
Coccinella septempunctata
Order: Coleoptera
|
be commonly found in plant roots and they all have nitrogen fixation abilities
|
0.04% |
1.6
|
|
Kosakonia
|
RISB0810 |
Hypothenemus hampei
Order: Coleoptera
|
might contribute to caffeine breakdown using the C-16 oxidation pathway
|
0.10% |
1.5
|
|
Raoultella
|
RISB1672 |
Spodoptera frugiperda
Order: Lepidoptera
|
downregulated POX but upregulated trypsin PI in this plant species
|
0.14% |
1.5
|
|
Nostoc
|
RISB0812 |
Hypothenemus hampei
Order: Coleoptera
|
might contribute to caffeine breakdown using the C-18 oxidation pathway
|
0.02% |
1.4
|
|
Variovorax
|
RISB2153 |
Osmia bicornis
Order: Hymenoptera
|
may be essential to support Osmia larvae in their nutrient uptake
|
0.03% |
1.3
|
|
Massilia
|
RISB2151 |
Osmia bicornis
Order: Hymenoptera
|
may be essential to support Osmia larvae in their nutrient uptake
|
0.02% |
1.3
|
|
Streptococcus
|
RISB2604 |
Homona magnanima
Order: Lepidoptera
|
influence the growth of Bacillus thuringiensis in the larvae
|
0.06% |
1.3
|
|
Lysinibacillus
|
RISB1416 |
Psammotermes hypostoma
Order: Blattodea
|
isolates showed significant cellulolytic activity
|
0.16% |
1.1
|
|
Halomonas
|
RISB1374 |
Bemisia tabaci
Order: Hemiptera
|
None
|
1.09% |
1.1
|
|
Neokomagataea
|
RISB1560 |
Oecophylla smaragdina
Order: Hymenoptera
|
may be related with the formic acid production
|
0.15% |
1.1
|
|
Brevibacterium
|
RISB0464 |
Acrida cinerea
Order: Orthoptera
|
correlated with the hemicellulose digestibility
|
0.02% |
1.0
|
|
Corynebacterium
|
RISB2360 |
Bombyx mori
Order: Lepidoptera
|
producing lipase in a gut environment
|
0.11% |
0.9
|
|
Brevibacterium
|
RISB2359 |
Bombyx mori
Order: Lepidoptera
|
producing lipase in a gut environment
|
0.02% |
0.8
|
|
Kosakonia
|
RISB1155 |
Tenebrio molitor
Order: Coleoptera
|
degrading plastics
|
0.10% |
0.5
|
|
Lysinibacillus
|
RISB1066 |
Oryctes rhinoceros
Order: Coleoptera
|
gut microbe
|
0.16% |
0.4
|
|
Kluyvera
|
RISB1064 |
Oryctes rhinoceros
Order: Coleoptera
|
gut microbe
|
0.15% |
0.4
|
|
Priestia
|
RISB0839 |
Helicoverpa armigera
Order: Lepidoptera
|
producing amylase
|
0.02% |
0.4
|
|
Flavobacterium
|
RISB0659 |
Melanaphis bambusae
Order: Hemiptera
|
None
|
0.15% |
0.2
|
|
Yersinia
|
RISB0407 |
Anaphes nitens
Order: Hymenoptera
|
None
|
0.10% |
0.1
|
|
Helicobacter
|
RISB0662 |
Melanaphis bambusae
Order: Hemiptera
|
None
|
0.06% |
0.1
|
|
Legionella
|
RISB1687 |
Polyplax serrata
Order: Phthiraptera
|
None
|
0.03% |
0.0
|
|
Cupriavidus
|
RISB0694 |
Alydus tomentosus
Order: Hemiptera
|
None
|
0.03% |
0.0
|
|
Brevibacterium
|
RISB0897 |
Myzus persicae
Order: Hemiptera
|
None
|
0.02% |
0.0
|
|
Paraburkholderia
|
RISB0125 |
Physopelta gutta
Order: Hemiptera
|
None
|
0.02% |
0.0
|
|
Neisseria
|
RISB0512 |
Plutella xylostella
Order: Lepidoptera
|
None
|
0.01% |
0.0
|
Download Files
Taxonomic Analysis Files
Assembly & Gene Prediction
Raw Sequencing Files
Direct download from NCBI SRARaw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.