SRR28113947 - Trixagus meybohmi

Basic Information

Run: SRR28113947

Assay Type: WGS

Bioproject: PRJNA1062330

Biosample: SAMN40029913

Bytes: 3745641709

Center Name: MAX PLANCK INSTITUTE FOR CHEMICAL ECOLOGY

Sequencing Information

Instrument: Illumina HiSeq 3000

Library Layout: PAIRED

Library Selection: RANDOM

Platform: ILLUMINA

Geographic Information

Country: Belgium

Continent: Europe

Location Name: Belgium

Latitude/Longitude: 50.026488 N 4.622770 E

Sample Information

Host: Trixagus meybohmi

Isolation: -

Biosample Model: Metagenome or environmental

Collection Date: 2019

Taxonomic Classification

Potential Symbionts

Based on our current records database, this section aims to identify potential functional symbionts in this metagenome sample, with scoring based on:

  • Relative abundance in sample
  • Species-level matches with known symbionts
  • Host insect order matches
  • Functional record completeness

Note: Showing top 3 highest scoring records for each species/genus

Symbiont Name Record Host Species Function Abundance
Score
Vibrio
RISB1810
Monochamus galloprovincialis
Order: Coleoptera
Have the ability for degradation of cellulose, proteins and starch
68.21%
79.5
Escherichia coli
RISB0128
Tribolium castaneum
Order: Coleoptera
may produce 4,8-dimethyldecanal (DMD) production that is strongly associated with attraction to females and host pheromone communication
2.31%
20.0
Serratia sp. UGAL515B_01
RISB0308
Rhopalotria slossonae
Order: Coleoptera
suggesting the occurrence of an unprecedented desferrioxamine-like biosynthetic pathway,including desferrioxamine B, which may help tolerating diets rich in azoxyglycosides, BMAA, and other cycad toxins, including a possible role for bacterial siderophores
0.01%
20.0
Pseudomonas sp. NC02
RISB1622
Dendroctonus valens
Order: Coleoptera
volatiles from predominant bacteria regulate the consumption sequence of carbon sources d-pinitol and d-glucose in the fungal symbiont Leptographium procerum, and appear to alleviate the antagonistic effect from the fungus against RTB larvae
0.19%
20.0
Pseudomonas sp. Colony2
RISB1622
Dendroctonus valens
Order: Coleoptera
volatiles from predominant bacteria regulate the consumption sequence of carbon sources d-pinitol and d-glucose in the fungal symbiont Leptographium procerum, and appear to alleviate the antagonistic effect from the fungus against RTB larvae
0.17%
20.0
Pseudomonas sp. CBS
RISB1622
Dendroctonus valens
Order: Coleoptera
volatiles from predominant bacteria regulate the consumption sequence of carbon sources d-pinitol and d-glucose in the fungal symbiont Leptographium procerum, and appear to alleviate the antagonistic effect from the fungus against RTB larvae
0.01%
19.8
Lactococcus lactis
RISB0967
Oulema melanopus
Order: Coleoptera
contribute to the decomposition of complex carbohydrates, fatty acids, or polysaccharides in the insect gut. It might also contribute to the improvement of nutrient availability.
0.05%
18.6
Streptomyces sp. T12
RISB0777
Copris tripartitus
Order: Coleoptera
contribute brood ball hygiene by inhibiting fungal parasites in the environment
1.84%
18.4
Sphingobacterium sp. dk4302
RISB2227
Leptinotarsa decemlineata
Order: Coleoptera
Colorado potato beetle (Leptinotarsa decemlineata) larvae exploit bacteria in their oral secretions to suppress antiherbivore defenses in tomato (Solanum lycopersicum)
0.02%
18.4
Bacillus cereus
RISB1056
Oryctes rhinoceros
Order: Coleoptera
provide symbiotic digestive functions to Oryctes
2.12%
18.1
Bacillus cereus
RISB1778
Lissorhoptrus oryzophilus
Order: Coleoptera
might be promising paratransgenesis candidates
2.12%
18.0
Proteus vulgaris
RISB0001
Leptinotarsa decemlineata
Order: Coleoptera
produces toxic hydrogen cyanide (HCN) and a mandelonitrile-producing cyanoglucoside, amygdalin, which protect the insect from predation
0.01%
17.7
Enterococcus faecalis
RISB0497
Cryptolestes ferrugineus
Order: Coleoptera
bacteria can degrade malathion, pirimiphos-methyl, and deltamethrin and utilize these insecticides as the carbon source in vitro.
0.05%
17.6
Enterococcus faecalis
RISB2042
Harpalus pensylvanicus
Order: Coleoptera
E. faecalis facilitate seed consumption by H. pensylvanicus, possibly by contributing digestive enzymes to their host
0.05%
17.4
Lactococcus lactis
RISB1430
Rhynchophorus ferrugineus
Order: Coleoptera
promote the development and body mass gain of RPW larvae by improving their nutrition metabolism
0.05%
17.0
Streptomyces sp. SJL17-4
RISB0777
Copris tripartitus
Order: Coleoptera
contribute brood ball hygiene by inhibiting fungal parasites in the environment
0.33%
16.9
Streptomyces sp. NBC_01255
RISB0777
Copris tripartitus
Order: Coleoptera
contribute brood ball hygiene by inhibiting fungal parasites in the environment
0.30%
16.9
Paludibacter propionicigenes
RISB2055
Odontotaenius disjunctus
Order: Coleoptera
microbial fixation of nitrogen that is important for this beetle to subsist on woody biomass
0.01%
16.9
Stenotrophomonas maltophilia
RISB0139
Tenebrio molitor
Order: Coleoptera
correlated with polyvinyl chloride PVC degradation
0.53%
16.5
Enterococcus faecalis
RISB0374
Tribolium castaneum
Order: Coleoptera
modulates host phosphine resistance by interfering with the redox system
0.05%
16.5
Paenibacillus sp. BR1-192
RISB0813
Hypothenemus hampei
Order: Coleoptera
might contribute to caffeine breakdown using the C-9 oxidation pathway
0.07%
16.5
Paludibacter propionicigenes
RISB2056
Odontotaenius disjunctus
Order: Coleoptera
plays an important role in nitrogen fixation
0.01%
15.9
Serratia sp. UGAL515B_01
RISB0746
Dendroctonus ponderosae
Order: Coleoptera
Degraded 20–50% of α-pinene (by GC-MS)
0.01%
15.8
Klebsiella pneumoniae
RISB1153
Tenebrio molitor
Order: Coleoptera
degrading plastics
0.21%
15.6
Lactococcus lactis
RISB1065
Oryctes rhinoceros
Order: Coleoptera
gut microbe
0.05%
15.3
Wolbachia
RISB1452
Octodonta nipae
Order: Coleoptera
Wolbachia harbored dominantly in a female than the male adult, while, no significant differences were observed between male and female body parts and tissues
2.13%
15.3
Lysinibacillus fusiformis
RISB1066
Oryctes rhinoceros
Order: Coleoptera
gut microbe
0.02%
15.2
Staphylococcus epidermidis
RISB1070
Oryctes rhinoceros
Order: Coleoptera
gut microbe
0.02%
15.2
Staphylococcus hominis
RISB1071
Oryctes rhinoceros
Order: Coleoptera
gut microbe
0.01%
15.2
Burkholderia
RISB1172
Lagria villosa
Order: Coleoptera
process a cryptic gene cluster that codes for the biosynthesis of a novel antifungal polyketide with a glutarimide pharmacophore, which led to the discovery of the gladiofungins as previously-overlooked components of the antimicrobial armory of the beetle symbiont
0.08%
15.1
Rahnella
RISB1623
Dendroctonus valens
Order: Coleoptera
volatiles from predominant bacteria regulate the consumption sequence of carbon sources d-pinitol and d-glucose in the fungal symbiont Leptographium procerum, and appear to alleviate the antagonistic effect from the fungus against RTB larvae
0.01%
14.8
Wolbachia
RISB2107
Sitophilus zeamais
Order: Coleoptera
Wolbachia directly favored weevil fertility and exhibited only mild indirect effects, usually enhancing the SZPE effect
2.13%
14.5
Burkholderia
RISB1729
Lagria hirta
Order: Coleoptera
the symbionts inhibit the growth of antagonistic fungi on the eggs of the insect host, indicating that the Lagria-associated Burkholderia have evolved from plant pathogenic ancestors into insect defensive mutualists
0.08%
14.4
Burkholderia
RISB1836
Dendroctonus valens
Order: Coleoptera
It can trongly degrade naringenin, and pinitol, the main soluble carbohydrate of P. tabuliformis, is retained in L. procerum-infected phloem and facilitate naringenin biodegradation by the microbiotas.
0.08%
14.1
Wolbachia
RISB1282
Ips sp.
Order: Coleoptera
inducing cytoplasmic incompatibility, resulting in reproductive distortions and hence
2.13%
13.8
Corynebacterium
RISB0363
Pagiophloeus tsushimanus
Order: Coleoptera
terpenoid-degrading: the highest degradation rates of D-camphor, linalool, and eucalyptol
0.57%
12.4
Rahnella
RISB1800
Dendroctonus valens
Order: Coleoptera
could alleviate or compromise the antagonistic effects of fungi O. minus and L. procerum on RTB larval growth
0.01%
12.2
Bacteroides
RISB1183
Oryzaephilus surinamensis
Order: Coleoptera
supplement precursors for the cuticle synthesis and thereby enhance desiccation resistance of its host
0.11%
12.2
Bacillus cereus
RISB2161
Termitidae
Order: Blattodea
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases that are secreted by gut microbiota to digest the structural and recalcitrant lignocellulosic residues in their foods.
2.12%
12.1
Rahnella
RISB0741
Dendroctonus ponderosae
Order: Coleoptera
R. aquatilis decreased (−)-α-pinene (38%) and (+)-α-pinene (46%) by 40% and 45% (by GC-MS), respectively
0.01%
12.1
Escherichia coli
RISB1339
Manduca sexta
Order: Lepidoptera
modulate immunity-related gene expression in the infected F0 larvae, and also in their offspring, triggered immune responses in the infected host associated with shifts in both DNA methylation and histone acetylation
2.31%
11.6
Kosakonia
RISB0810
Hypothenemus hampei
Order: Coleoptera
might contribute to caffeine breakdown using the C-16 oxidation pathway
0.01%
11.4
Halomonas
RISB1808
Monochamus galloprovincialis
Order: Coleoptera
Have the ability for degradation of cellulose, proteins and starch
0.02%
11.3
Micromonospora
RISB2034
Harpalus sinicus
Order: Coleoptera
None
0.78%
10.8
Turicibacter
RISB0451
Odontotaenius disjunctus
Order: Coleoptera
degrading  ellulose and xylan
0.13%
10.7
Mycobacterium
RISB1156
Nicrophorus concolor
Order: Coleoptera
produces Antimicrobial compounds
0.02%
10.7
Kosakonia
RISB1155
Tenebrio molitor
Order: Coleoptera
degrading plastics
0.01%
10.4
Buchnera aphidicola
RISB0236
Acyrthosiphon pisum
Order: Hemiptera
Buchnera the nutritional endosymbiont of A. pisum is located inside of bacteriocytes and requires aspartate from the aphid host, because it cannot make it de novo. Further Buchnera needs aspartate for the biosynthesis of the essential amino acids lysine and threonine, which the aphid and Buchnera require for survival
0.25%
10.3
Klebsiella pneumoniae
RISB2185
Scirpophaga incertulas
Order: Lepidoptera
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases that are secreted by gut microbiota to digest the structural and recalcitrant lignocellulosic residues in their foods.
0.21%
10.2
Clostridium sp. DL-VIII
RISB2301
Pyrrhocoris apterus
Order: Hemiptera
could play an important role for the insect by degrading complex dietary components, providing nutrient supplementation, or detoxifying noxious chemicals (e.g. cyclopropenoic fatty acids or gossypol) in the diet
0.90%
10.1
Paenibacillus polymyxa
RISB2195
Termitidae
Order: Blattodea
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases that are secreted by gut microbiota to digest the structural and recalcitrant lignocellulosic residues in their foods.
0.01%
10.0
Buchnera aphidicola
RISB2485
Macrosiphum euphorbiae
Order: Hemiptera
symbiont expression patterns differ between aphid clones with differing levels of virulence, and are influenced by the aphids' host plant. Potentially, symbionts may contribute to differential adaptation of aphids to host plant resistance
0.25%
10.0
Stenotrophomonas maltophilia
RISB1122
Bombyx mori
Order: Lepidoptera
facilitate host resistance against organophosphate insecticides, provides essential amino acids that increase host fitness and allow the larvae to better tolerate the toxic effects of the insecticide.
0.53%
9.5
Clostridium sp. JN-1
RISB2301
Pyrrhocoris apterus
Order: Hemiptera
could play an important role for the insect by degrading complex dietary components, providing nutrient supplementation, or detoxifying noxious chemicals (e.g. cyclopropenoic fatty acids or gossypol) in the diet
0.02%
9.2
Clostridium sp. JN-9
RISB2301
Pyrrhocoris apterus
Order: Hemiptera
could play an important role for the insect by degrading complex dietary components, providing nutrient supplementation, or detoxifying noxious chemicals (e.g. cyclopropenoic fatty acids or gossypol) in the diet
0.01%
9.2
Buchnera aphidicola
RISB0685
Acyrthosiphon pisum
Order: Hemiptera
It supplies the host with vitamins and essential amino acids, such as arginine and methionine that aphids cannot synthesize or derive insufficiently from their diet, the phloem sap of plants
0.25%
9.1
Mammaliicoccus sciuri
RISB0075
Bombyx mori
Order: Lepidoptera
could produce a secreted chitinolytic lysozyme (termed Msp1) to damage fungal cell walls,completely inhibit the spore germination of fungal entomopathogens Metarhizium robertsii and Beauveria bassiana
0.02%
9.0
Candidatus Carsonella ruddii
RISB0394
Cacopsylla pyricola
Order: Hemiptera
Carsonella produces most essential amino acids (EAAs) for C. pyricola, Psyllophila complements the genes missing in Carsonella for the tryptophan pathway and synthesizes some vitamins and carotenoids
0.03%
9.0
Staphylococcus xylosus
RISB2497
Anticarsia gemmatalis
Order: Lepidoptera
allow the adaptation of this insect to plants rich in protease inhibitors, minimizing the potentially harmful consequences of protease inhibitors from some of this insect host plants, such as soybean
0.01%
9.0
Acinetobacter pittii
RISB1977
Blattella germanica
Order: Blattodea
gut microbiota contributes to production of VCAs that act as fecal aggregation agents and that cockroaches discriminate among the complex odors that emanate from a diverse microbial community
0.03%
8.9
Spiroplasma sp. BIUS-1
RISB1353
Cephus cinctus
Order: Hymenoptera
The bacterium also encoded biosynthetic pathways for essential vitamins B2, B3, and B9. We identified putative Spiroplasma virulence genes: cardiolipin and chitinase.
0.02%
8.3
Paenibacillus sp. BR1-192
RISB0774
Delia antiqua
Order: Diptera
showed significant contact inhibition activity against fungal entomopathogen Fusarium moniliforme, Botryosphaeria dothidea and both Fusarium oxysporum respectively
0.07%
8.3
Arthrobacter sp. K5
RISB0769
Delia antiqua
Order: Diptera
showed significant volatile inhibition activity against fungal entomopathogen Fusarium moniliforme, Botryosphaeria dothidea and both Fusarium oxysporum respectively
0.02%
8.3
Stenotrophomonas maltophilia
RISB1227
Delia antiqua
Order: Diptera
six bacteria protect larvae from infection with the entomopathogen Beauveria bassiana through symbiotic bacterium-derived organic acids
0.53%
8.2
Blattabacterium cuenoti
RISB0133
Panesthiinae
Order: Blattodea
enables hosts to subsist on a nutrient-poor diet; endosymbiont genome erosions are associated with repeated host transitions to an underground life
0.29%
8.2
Escherichia coli
RISB2120
Galleria mellonella
Order: Lepidoptera
mediate trans-generational immune priming
2.31%
8.1
Comamonas terrigena
RISB2021
Bactrocera dorsalis
Order: Diptera
This group in the immature stages may be helping the insects to cope with oxidative stress by supplementing available oxygen.
0.03%
7.5
Spiroplasma ixodetis
RISB0842
Dactylopius coccus
Order: Hemiptera
use the T4SS to interact with the Dactylopius cells, which show a strong interaction and molecular signaling in the symbiosis
0.02%
7.5
Serratia sp. UGAL515B_01
RISB1516
Anopheles stephensi
Order: Diptera
produce lipodepsipeptides, stephensiolides A-K, that have antibiotic activity and facilitate bacterial surface motility.
0.01%
7.4
Leclercia adecarboxylata
RISB1757
Spodoptera frugiperda
Order: Lepidoptera
degradation of lambda-cyhalothrin, deltamethrin, chlorpyrifos ethyl, lufenuron and spinosyn
0.01%
6.8
Blattabacterium sp. (Mastotermes darwiniensis)
RISB1534
Periplaneta fuliginosa
Order: Blattodea
involved in uric acid degradation, nitrogen assimilation and nutrient provisioning
0.02%
6.7
Blattabacterium sp. (Nauphoeta cinerea)
RISB1534
Periplaneta fuliginosa
Order: Blattodea
involved in uric acid degradation, nitrogen assimilation and nutrient provisioning
0.01%
6.7
Klebsiella pneumoniae
RISB2459
Bombyx mori
Order: Lepidoptera
degradation of cellulose, xylan, pectin and starch
0.21%
6.2
Leclercia adecarboxylata
RISB1758
Spodoptera frugiperda
Order: Lepidoptera
may influence the metabolization of pesticides in insects
0.01%
6.2
Proteus vulgaris
RISB2460
Bombyx mori
Order: Lepidoptera
degradation of cellulose, xylan, pectin and starch
0.01%
6.0
Lysinibacillus fusiformis
RISB1417
Psammotermes hypostoma
Order: Blattodea
isolates showed significant cellulolytic activity
0.02%
6.0
Providencia alcalifaciens
RISB1168
Bactrocera dorsalis
Order: Diptera
Promote the growth of larvae
0.03%
5.6
Chryseobacterium sp. T16E-39
RISB2092
Aedes aegypti
Order: Diptera
axenic larvae cannot develop
0.02%
5.6
Chryseobacterium sp. IHB B 17019
RISB2092
Aedes aegypti
Order: Diptera
axenic larvae cannot develop
0.01%
5.6
Candidatus Karelsulcia muelleri
RISB1591
Philaenus spumarius
Order: Hemiptera
None
0.21%
5.2
Enterobacter hormaechei
RISB1331
Zeugodacus cucurbitae
Order: Diptera
None
0.07%
5.1
Lactobacillus
RISB1866
Drosophila melanogaster
Order: Diptera
The bacterial cells may thus be able to ameliorate the pH of the acidic region, by the release of weak bases.Additionally, the bacteria have a complex relationship with physiological processes which may affect ionic homeostasis in the gut, such as nutrition and immune function
0.04%
5.0
Candidatus Carsonella ruddii
RISB0748
Diaphorina citri
Order: Hemiptera
None
0.03%
5.0
Pectobacterium carotovorum
RISB1772
Muscidae
Order: Diptera
None
0.03%
5.0
Candidatus Erwinia haradaeae
RISB1632
Lachninae
Order: Hemiptera
None
0.02%
5.0
Candidatus Annandia pinicola
RISB1661
Adelgidae
Order: Hemiptera
None
0.01%
5.0
Candidatus Legionella polyplacis
RISB1687
Polyplax serrata
Order: Phthiraptera
None
0.01%
5.0
Arsenophonus
RISB1047
Aphis gossypii
Order: Hemiptera
secondary symbiont reduction led to reduction of the total life span and intrinsic rate of natural increase as well as appearance of the deformed dead offspring. H. defensa and Arsenophonus contributed to the fitness of A. gossypii by enhancing its performance, but not through parasitoid resistance.
0.01%
5.0
Gilliamella
RISB0102
Apis mellifera
Order: Hymenoptera
Gilliamella apicola carries the gene for the desaturase FADS2, which is able to metabolize polyunsaturated fatty acids from pollen and synthesize endocannabinoid, a lipogenic neuroactive substance, thereby modulating reward learning and memory in honeybees.
0.01%
5.0
Arsenophonus
RISB1300
Aphis gossypii
Order: Hemiptera
Arsenophonus sp. can have different effects on its hosts, including obligate mutualism in blood-sucking insects, improving the performance of whiteflies, or through facultative mutualism by protecting psyllids against parasitoid attacks.
0.01%
4.8
Apibacter
RISB0603
Apis cerana
Order: Hymenoptera
The acquisition of genes for the degradation of the toxic monosaccharides potentiates Apibacter with the ability to utilize the pollen hydrolysis products, at the same time enabling monosaccharide detoxification for the host
0.02%
4.5
Arsenophonus
RISB1334
Ommatissus lybicus
Order: Hemiptera
the removal of Arsenophonus increased the developmental time of the immature stages and reduced the values of different life-history parameters including nymphal survival rate and adult longevity in the host
0.01%
4.2
Xanthomonas
RISB0498
Xylocopa appendiculata
Order: Hymenoptera
Xanthomonas strain from Japanese carpenter bee is effective PU-degradable bacterium and is able to use polyacryl-based PU as a nutritional source, as well as other types of PS-PU and PE-PU
0.01%
3.8
Amycolatopsis
RISB0483
Trachymyrmex smithi
Order: Hymenoptera
inhibited the growth of Pseudonocardia symbionts under laboratory conditions. The novel analog nocamycin V from the strain was identified as the antibacterial compound
0.33%
3.7
Amycolatopsis
RISB0199
Trachymyrmex
Order: Hymenoptera
produce antibiotic EC0-0501 that has strong activity against ant-associated Actinobacteria and may also play a role in bacterial competition in this niche
0.33%
3.4
Lactobacillus
RISB0292
Lymantria dispar asiatica
Order: Lepidoptera
Beauveria bassiana infection-based assays showed that the mortality of non-axenic L. dispar asiatica larvae was significantly higher than that of axenic larvae at 72 h.
0.04%
3.4
Leucobacter
RISB0771
Delia antiqua
Order: Diptera
showed significant contact inhibition activity against fungal entomopathogen Fusarium moniliforme, Botryosphaeria dothidea and both Fusarium oxysporum respectively
0.04%
3.3
Lactobacillus
RISB0715
Spodoptera frugiperda
Order: Lepidoptera
Have the function of nutrient absorption, energy metabolism, the plant’s secondary metabolites degradation, insect immunity regulation, and so on
0.04%
2.9
Shewanella
RISB1924
Anopheles gambiae
Order: Diptera
may be related with mediating adaptation to different ecological niches or in shaping specific adult behaviors including mating
0.07%
2.6
Bartonella
RISB1673
Apis mellifera
Order: Hymenoptera
a gut symbiont of insects and that the adaptation to blood-feeding insects facilitated colonization of the mammalian bloodstream
0.01%
2.6
Pseudonocardia
RISB0947
Acromyrmex
Order: Hymenoptera
Pseudonocardia in the Acromyrmex leaf-cutter ants as a protective partner against the entomopathogenic fungus Metarhizium
0.03%
2.5
Bacteroides
RISB0256
Leptocybe invasa
Order: Hymenoptera
Differences in Male-Killing Rickettsia Bacteria between Lineages of the Invasive Gall-Causing Pest Leptocybe invasa
0.11%
2.4
Corynebacterium
RISB0531
Helicoverpa armigera
Order: Lepidoptera
Corynebacterium sp. 2-TD, mediates the toxicity of the 2-tridecanone to H. armigera
0.57%
2.2
Bacteroides
RISB0090
Hyphantria cunea
Order: Lepidoptera
enhance the compatibility of invasive pests to new hosts and enable more rapid adaptation to new habitats.
0.11%
2.2
Pseudonocardia
RISB1218
Mycocepurus smithii
Order: Hymenoptera
produce secondary metabolites with antibiotic activity that protects the fungus garden against pathogens
0.03%
2.1
Streptococcus
RISB2625
Galleria mellonella
Order: Lepidoptera
suppress bacteria ingested with food by producing bacteriocin and by releasing a lysozyme like enzyme
0.06%
2.1
Apilactobacillus
RISB0475
Apis mellifera
Order: Hymenoptera
A. kunkeei alleviated acetamiprid-induced symbiotic microbiota dysregulation and mortality in honeybees
0.01%
2.1
Xanthomonas
RISB0217
Xylocopa appendiculata
Order: Hymenoptera
strains biodegraded polyethylene terephthalate PET powder, broke it into its degradation products
0.01%
2.0
Xenorhabdus
RISB1372
Spodoptera frugiperda
Order: Lepidoptera
the products of the symbiont gene cluster inhibit Spodoptera frugiperda phenoloxidase activity
0.01%
1.9
Streptococcus
RISB2624
Reticulitermes flavipes
Order: Blattodea
can be broken down into substances such as carbon dioxide, ammonia and acetic acid
0.06%
1.7
Xenorhabdus
RISB2270
Acyrthosiphon pisum
Order: Hemiptera
have the gene PIN1 encoding the protease inhibitor protein against aphids
0.01%
1.5
Corynebacterium
RISB2360
Bombyx mori
Order: Lepidoptera
producing lipase in a gut environment
0.57%
1.3
Streptococcus
RISB2604
Homona magnanima
Order: Lepidoptera
influence the growth of Bacillus thuringiensis in the larvae
0.06%
1.3
Paraclostridium
RISB0028
Sesamia inferens
Order: Lepidoptera
degrade Chlorpyrifos and Chlorantraniliprole in vitro
0.05%
1.1
Curtobacterium
RISB1910
Hyles euphorbiae
Order: Lepidoptera
able to degrade alkaloids and/or latex
0.03%
0.8
Micromonospora
RISB2033
Palomena viridissima
Order: Hemiptera
None
0.78%
0.8
Nocardioides
RISB1914
Hyles euphorbiae
Order: Lepidoptera
able to degrade alkaloids and/or latex
0.01%
0.8
Priestia
RISB0839
Helicoverpa armigera
Order: Lepidoptera
producing amylase
0.02%
0.4
Gilliamella
RISB0620
Spodoptera frugiperda
Order: Lepidoptera
degrade amygdalin
0.01%
0.4
Leucobacter
RISB1876
Aedes aegypti
Order: Diptera
gut microbiome
0.04%
0.3
Peribacillus
RISB1877
Aedes aegypti
Order: Diptera
gut microbiome
0.02%
0.3
Flavobacterium
RISB0659
Melanaphis bambusae
Order: Hemiptera
None
0.19%
0.2
Methylorubrum
RISB0903
Myzus persicae
Order: Hemiptera
None
0.14%
0.1
Cupriavidus
RISB0694
Alydus tomentosus
Order: Hemiptera
None
0.13%
0.1
Curtobacterium
RISB0900
Myzus persicae
Order: Hemiptera
None
0.03%
0.0
Candidatus Phytoplasma
RISB1620
Cacopsylla pyricola
Order: Hemiptera
None
0.03%
0.0
Helicobacter
RISB0662
Melanaphis bambusae
Order: Hemiptera
None
0.03%
0.0
Halomonas
RISB1374
Bemisia tabaci
Order: Hemiptera
None
0.02%
0.0
Apibacter
RISB0604
Apis cerana
Order: Hymenoptera
None
0.02%
0.0
Paraburkholderia
RISB0125
Physopelta gutta
Order: Hemiptera
None
0.02%
0.0
Myroides
RISB0626
Musca altica
Order: Diptera
None
0.02%
0.0
Gilliamella
RISB1945
Apis cerana
Order: Hymenoptera
None
0.01%
0.0

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Taxonomic Analysis Files

Kraken Report

Detailed taxonomic classification

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Krona HTML

Interactive taxonomic visualization

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Bracken Results

Species abundance estimation

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Assembly & Gene Prediction

Assembled Contigs

MEGAHIT assembly results

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Predicted Genes

Gene sequences (FASTA)

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Gene Annotation

GFF format annotation

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Genome Binning

MetaBAT2 Bins

Compressed genome bins

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Bin Information

Quality metrics and statistics

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Raw Sequencing Files

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Run ID File Size
SRR28113947
3.5 GB Download

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