SRR28034360 - Trixagus turgidus

Basic Information

Run: SRR28034360

Assay Type: WGS

Bioproject: PRJNA1062330

Biosample: SAMN39984757

Bytes: 534441903

Center Name: MAX PLANCK INSTITUTE FOR CHEMICAL ECOLOGY

Sequencing Information

Instrument: Illumina HiSeq 3000

Library Layout: PAIRED

Library Selection: RANDOM

Platform: ILLUMINA

Geographic Information

Country: Japan

Continent: Asia

Location Name: Japan

Latitude/Longitude: 43.023083 N 141.416590 E

Sample Information

Host: Trixagus turgidus

Isolation: -

Biosample Model: Metagenome or environmental

Collection Date: 2020

Taxonomic Classification

Potential Symbionts

Based on our current records database, this section aims to identify potential functional symbionts in this metagenome sample, with scoring based on:

  • Relative abundance in sample
  • Species-level matches with known symbionts
  • Host insect order matches
  • Functional record completeness

Note: Showing top 3 highest scoring records for each species/genus

Symbiont Name Record Host Species Function Abundance
Score
Buchnera aphidicola
RISB0236
Acyrthosiphon pisum
Order: Hemiptera
Buchnera the nutritional endosymbiont of A. pisum is located inside of bacteriocytes and requires aspartate from the aphid host, because it cannot make it de novo. Further Buchnera needs aspartate for the biosynthesis of the essential amino acids lysine and threonine, which the aphid and Buchnera require for survival
22.94%
32.9
Buchnera aphidicola
RISB2485
Macrosiphum euphorbiae
Order: Hemiptera
symbiont expression patterns differ between aphid clones with differing levels of virulence, and are influenced by the aphids' host plant. Potentially, symbionts may contribute to differential adaptation of aphids to host plant resistance
22.94%
32.7
Buchnera aphidicola
RISB0685
Acyrthosiphon pisum
Order: Hemiptera
It supplies the host with vitamins and essential amino acids, such as arginine and methionine that aphids cannot synthesize or derive insufficiently from their diet, the phloem sap of plants
22.94%
31.7
Escherichia coli
RISB0128
Tribolium castaneum
Order: Coleoptera
may produce 4,8-dimethyldecanal (DMD) production that is strongly associated with attraction to females and host pheromone communication
8.40%
26.1
Pseudomonas sp. URMO17WK12:I11
RISB1622
Dendroctonus valens
Order: Coleoptera
volatiles from predominant bacteria regulate the consumption sequence of carbon sources d-pinitol and d-glucose in the fungal symbiont Leptographium procerum, and appear to alleviate the antagonistic effect from the fungus against RTB larvae
0.29%
20.1
Streptomyces sp. NBC_01324
RISB0777
Copris tripartitus
Order: Coleoptera
contribute brood ball hygiene by inhibiting fungal parasites in the environment
3.43%
20.0
Serratia liquefaciens
RISB1624
Dendroctonus valens
Order: Coleoptera
volatiles from predominant bacteria regulate the consumption sequence of carbon sources d-pinitol and d-glucose in the fungal symbiont Leptographium procerum, and appear to alleviate the antagonistic effect from the fungus against RTB larvae
0.12%
19.9
Pseudomonas sp. URMO17WK12:I11
RISB2224
Leptinotarsa decemlineata
Order: Coleoptera
Colorado potato beetle (Leptinotarsa decemlineata) larvae exploit bacteria in their oral secretions to suppress antiherbivore defenses in tomato (Solanum lycopersicum)
0.29%
18.6
Bacillus cereus
RISB1056
Oryctes rhinoceros
Order: Coleoptera
provide symbiotic digestive functions to Oryctes
2.26%
18.2
Bacillus cereus
RISB1778
Lissorhoptrus oryzophilus
Order: Coleoptera
might be promising paratransgenesis candidates
2.26%
18.2
Morganella morganii
RISB1867
Costelytra zealandica
Order: Coleoptera
Female beetles were previously shown to use phenol as their sex pheromone produced by symbiotic bacteria in the accessory or colleterial gland
0.21%
18.1
Proteus vulgaris
RISB0001
Leptinotarsa decemlineata
Order: Coleoptera
produces toxic hydrogen cyanide (HCN) and a mandelonitrile-producing cyanoglucoside, amygdalin, which protect the insect from predation
0.29%
18.0
Bacillus sp. FSL K6-4563
RISB1645
Osphranteria coerulescens
Order: Coleoptera
The isolate has cellulolytic activity and can hydrolyze CMC, avicel, cellulose and sawdust with broad temperature and pH stability
0.37%
18.0
Sodalis glossinidius
RISB2588
Sitophilus zeamais
Order: Coleoptera
maintains and expresses inv/spa genes encoding a type III secretion system homologous to that used for invasion by bacterial pathogens
0.07%
17.8
Escherichia coli
RISB1339
Manduca sexta
Order: Lepidoptera
modulate immunity-related gene expression in the infected F0 larvae, and also in their offspring, triggered immune responses in the infected host associated with shifts in both DNA methylation and histone acetylation
8.40%
17.7
Streptomyces sp. WAC00303
RISB0777
Copris tripartitus
Order: Coleoptera
contribute brood ball hygiene by inhibiting fungal parasites in the environment
1.14%
17.7
Streptomyces sp. NBC_01217
RISB0777
Copris tripartitus
Order: Coleoptera
contribute brood ball hygiene by inhibiting fungal parasites in the environment
0.72%
17.3
Serratia liquefaciens
RISB1801
Dendroctonus valens
Order: Coleoptera
could alleviate or compromise the antagonistic effects of fungi O. minus and L. procerum on RTB larval growth
0.12%
17.3
Stenotrophomonas maltophilia
RISB0139
Tenebrio molitor
Order: Coleoptera
correlated with polyvinyl chloride PVC degradation
1.11%
17.1
Morganella morganii
RISB1548
Costelytra zealandica
Order: Coleoptera
symbionts residing in the colleterial glands produce phenol 1 as the female sex pheromone
0.21%
17.0
Morganella morganii
RISB1868
Costelytra zealandica
Order: Coleoptera
produces phenol as the sex pheromone of the host from tyrosine in the colleterial gland
0.21%
17.0
Pseudomonas sp. URMO17WK12:I11
RISB0815
Hypothenemus hampei
Order: Coleoptera
might contribute to caffeine breakdown using the C-15 oxidation pathway
0.29%
16.7
Paenibacillus sp. FSL W7-1279
RISB0813
Hypothenemus hampei
Order: Coleoptera
might contribute to caffeine breakdown using the C-9 oxidation pathway
0.17%
16.6
Staphylococcus epidermidis
RISB1070
Oryctes rhinoceros
Order: Coleoptera
gut microbe
0.09%
15.3
Escherichia coli
RISB2120
Galleria mellonella
Order: Lepidoptera
mediate trans-generational immune priming
8.40%
14.2
Lactococcus
RISB0967
Oulema melanopus
Order: Coleoptera
contribute to the decomposition of complex carbohydrates, fatty acids, or polysaccharides in the insect gut. It might also contribute to the improvement of nutrient availability.
0.13%
13.7
Lactococcus
RISB0116
Novius pumilus
Order: Coleoptera
were predicted to have genes related to hydrocarbon, fatty acids, and chitin degradation, which may assist their hosts in digesting the wax shell covering the scale insects
0.13%
13.6
Wolbachia
RISB1452
Octodonta nipae
Order: Coleoptera
Wolbachia harbored dominantly in a female than the male adult, while, no significant differences were observed between male and female body parts and tissues
0.34%
13.5
Wolbachia
RISB2107
Sitophilus zeamais
Order: Coleoptera
Wolbachia directly favored weevil fertility and exhibited only mild indirect effects, usually enhancing the SZPE effect
0.34%
12.7
Bacteroides
RISB1183
Oryzaephilus surinamensis
Order: Coleoptera
supplement precursors for the cuticle synthesis and thereby enhance desiccation resistance of its host
0.38%
12.4
Vibrio
RISB1810
Monochamus galloprovincialis
Order: Coleoptera
Have the ability for degradation of cellulose, proteins and starch
1.04%
12.4
Candidatus Nardonella
RISB2449
Euscepes postfasciatus
Order: Coleoptera
endosymbiont is involved in normal growth and development of the host weevil
0.81%
12.3
Candidatus Nardonella
RISB1931
Lissorhoptrus oryzophilus
Order: Coleoptera
might be not playing critical roles in the reproduction of L. oryzophilus
0.81%
12.3
Lactococcus
RISB1430
Rhynchophorus ferrugineus
Order: Coleoptera
promote the development and body mass gain of RPW larvae by improving their nutrition metabolism
0.13%
12.1
Wolbachia
RISB1282
Ips sp.
Order: Coleoptera
inducing cytoplasmic incompatibility, resulting in reproductive distortions and hence
0.34%
12.0
Nostoc
RISB0812
Hypothenemus hampei
Order: Coleoptera
might contribute to caffeine breakdown using the C-18 oxidation pathway
0.22%
11.6
Candidatus Nardonella
RISB1668
Multiple species
Order: Coleoptera
Possibly tyrosine precursor provisioning
0.81%
11.6
Kosakonia
RISB0810
Hypothenemus hampei
Order: Coleoptera
might contribute to caffeine breakdown using the C-16 oxidation pathway
0.07%
11.5
Aeromonas
RISB1145
Tenebrio molitor
Order: Coleoptera
degrading plastics
0.12%
10.5
Kosakonia
RISB1155
Tenebrio molitor
Order: Coleoptera
degrading plastics
0.07%
10.4
Paenibacillus polymyxa
RISB2195
Termitidae
Order: Blattodea
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases that are secreted by gut microbiota to digest the structural and recalcitrant lignocellulosic residues in their foods.
0.17%
10.2
Micromonospora
RISB2034
Harpalus sinicus
Order: Coleoptera
None
0.16%
10.2
Stenotrophomonas maltophilia
RISB1122
Bombyx mori
Order: Lepidoptera
facilitate host resistance against organophosphate insecticides, provides essential amino acids that increase host fitness and allow the larvae to better tolerate the toxic effects of the insecticide.
1.11%
10.1
Candidatus Schneideria nysicola
RISB0872
Nysius sp.
Order: Hemiptera
synthesize four B vitamins(Pan, pantothenate;Fol, folate; Rib, riboflavin; Pyr, pyridoxine) and five Essential Amino Acids(Ile, isoleucine; Val, valine; Lys, lysine; Thr, threonine; Phe, phenylalanine)
0.48%
9.5
Acinetobacter pittii
RISB1977
Blattella germanica
Order: Blattodea
gut microbiota contributes to production of VCAs that act as fecal aggregation agents and that cockroaches discriminate among the complex odors that emanate from a diverse microbial community
0.66%
9.5
Clostridium sp. DL-VIII
RISB2301
Pyrrhocoris apterus
Order: Hemiptera
could play an important role for the insect by degrading complex dietary components, providing nutrient supplementation, or detoxifying noxious chemicals (e.g. cyclopropenoic fatty acids or gossypol) in the diet
0.10%
9.3
Candidatus Carsonella ruddii
RISB0394
Cacopsylla pyricola
Order: Hemiptera
Carsonella produces most essential amino acids (EAAs) for C. pyricola, Psyllophila complements the genes missing in Carsonella for the tryptophan pathway and synthesizes some vitamins and carotenoids
0.19%
9.2
Stenotrophomonas maltophilia
RISB1227
Delia antiqua
Order: Diptera
six bacteria protect larvae from infection with the entomopathogen Beauveria bassiana through symbiotic bacterium-derived organic acids
1.11%
8.8
Blattabacterium cuenoti
RISB0133
Panesthiinae
Order: Blattodea
enables hosts to subsist on a nutrient-poor diet; endosymbiont genome erosions are associated with repeated host transitions to an underground life
0.80%
8.7
Candidatus Mikella endobia
RISB1887
Paracoccus marginatus
Order: Hemiptera
a nested symbiotic arrangement, where one bacterium lives inside another bacterium,occurred in building the mosaic metabolic pathways seen in mitochondria and plastids
0.37%
8.7
Candidatus Portiera aleyrodidarum
RISB1193
Bemisia tabaci
Order: Hemiptera
synthesizing essential amino acid (e.g. tryptophan, leucine and L-Isoleucine), Bemisia tabaci provides vital nutritional support for growth, development and reproduction
0.23%
8.6
Candidatus Gullanella endobia
RISB1885
Ferrisia virgata
Order: Hemiptera
a nested symbiotic arrangement, where one bacterium lives inside another bacterium,occurred in building the mosaic metabolic pathways seen in mitochondria and plastids
0.24%
8.6
Spiroplasma sp. TIUS-1
RISB1353
Cephus cinctus
Order: Hymenoptera
The bacterium also encoded biosynthetic pathways for essential vitamins B2, B3, and B9. We identified putative Spiroplasma virulence genes: cardiolipin and chitinase.
0.13%
8.5
Paenibacillus sp. FSL W7-1279
RISB0774
Delia antiqua
Order: Diptera
showed significant contact inhibition activity against fungal entomopathogen Fusarium moniliforme, Botryosphaeria dothidea and both Fusarium oxysporum respectively
0.17%
8.4
Candidatus Hoaglandella endobia
RISB1886
Trionymus perrisii
Order: Hemiptera
a nested symbiotic arrangement, where one bacterium lives inside another bacterium,occurred in building the mosaic metabolic pathways seen in mitochondria and plastids
0.06%
8.4
Wigglesworthia glossinidia
RISB0369
Glossina morsitans
Order: Diptera
symbiont-derived factors, likely B vitamins, are critical for the proper function of both lipid biosynthesis and lipolysis to maintain tsetse fly fecundity
0.18%
8.3
Candidatus Moranella endobia
RISB2232
Planococcus citri
Order: Hemiptera
be responsible for the biosynthesis of most cellular components and energy provision, and controls most informational processes for the consortium
0.08%
8.0
Candidatus Tachikawaea gelatinosa
RISB2112
Urostylis westwoodii
Order: Hemiptera
the symbiont localizes to a specialized midgut region and supplies essential amino acids deficient in the host's diet
0.57%
7.9
Sodalis glossinidius
RISB2256
Glossina palpalis
Order: Diptera
flies harbouring this symbiont have three times greater probability of being infected by trypanosomes than flies without the symbiont.
0.07%
7.8
Candidatus Portiera aleyrodidarum
RISB2289
Bemisia tabaci
Order: Hemiptera
encoding the capability to synthetize, or participate in the synthesis of, several amino acids and carotenoids,
0.23%
7.5
Wigglesworthia glossinidia
RISB1786
Glossina morsitans
Order: Diptera
Synthesis of a large number of B vitamins, to supplement the host nutritional deficiencies of the diet
0.18%
7.2
Candidatus Portiera aleyrodidarum
RISB1973
Bemisia tabaci
Order: Hemiptera
a primary symbiont, which compensates for the deficient nutritional composition of its food sources
0.23%
7.2
Candidatus Westeberhardia cardiocondylae
RISB1794
Cardiocondyla obscurior
Order: Hymenoptera
Contributes to cuticle formation and is responsible for host invasive success
0.59%
7.1
Candidatus Ishikawella capsulata
RISB2368
Megacopta punctatissima
Order: Hemiptera
Microbe compensates for nutritional deficiency of host diet by supplying essential amino acids
0.20%
7.1
Serratia liquefaciens
RISB2461
Bombyx mori
Order: Lepidoptera
able to utilize three polysaccharides including CMcellulose, xylan and pectin
0.12%
6.7
Candidatus Westeberhardia cardiocondylae
RISB1795
Cardiocondyla obscurior
Order: Hymenoptera
a contribution of Westeberhardia to cuticle formation
0.59%
6.7
Sodalis glossinidius
RISB2471
Glossina morsitans
Order: Diptera
retains a thiamine ABC transporter (tbpAthiPQ) believed to salvage thiamine
0.07%
6.6
Blattabacterium cuenoti
RISB0518
Cryptocercus punctulatus
Order: Blattodea
collaborative arginine biosynthesis
0.80%
6.5
Wigglesworthia glossinidia
RISB2577
Glossina brevipalpis
Order: Diptera
provide its tsetse host with metabolites such as vitamins
0.18%
6.3
Proteus vulgaris
RISB2460
Bombyx mori
Order: Lepidoptera
degradation of cellulose, xylan, pectin and starch
0.29%
6.3
Providencia rettgeri
RISB1001
Anastrepha obliqua
Order: Diptera
improve the sexual competitiveness of males
0.42%
6.3
Blattabacterium cuenoti
RISB0093
Blattella germanica
Order: Blattodea
obligate endosymbiont
0.80%
6.2
Candidatus Riesia pediculicola
RISB2452
Pediculus humanus humanus
Order: Phthiraptera
supplement body lice nutritionally deficient blood diet
0.09%
6.2
Providencia rettgeri
RISB1169
Bactrocera dorsalis
Order: Diptera
Promote the growth of larvae
0.42%
6.0
Candidatus Ishikawella capsulata
RISB2543
Megacopta punctatissima
Order: Hemiptera
Enhance pest status of the insect host
0.20%
6.0
Candidatus Erwinia haradaeae
RISB1632
Lachninae
Order: Hemiptera
None
0.89%
5.9
Providencia sp. PROV188
RISB1574
Bactrocera tau
Order: Diptera
could attract male and female B. tau
0.08%
5.8
Chryseobacterium sp. POL2
RISB2092
Aedes aegypti
Order: Diptera
axenic larvae cannot develop
0.09%
5.7
Candidatus Annandia adelgestsuga
RISB2207
Adelges tsugae
Order: Hemiptera
None
0.59%
5.6
Gilliamella
RISB0102
Apis mellifera
Order: Hymenoptera
Gilliamella apicola carries the gene for the desaturase FADS2, which is able to metabolize polyunsaturated fatty acids from pollen and synthesize endocannabinoid, a lipogenic neuroactive substance, thereby modulating reward learning and memory in honeybees.
0.54%
5.5
Candidatus Annandia pinicola
RISB1661
Adelgidae
Order: Hemiptera
None
0.51%
5.5
Candidatus Palibaumannia cicadellinicola
RISB1594
Graphocephala coccinea
Order: Hemiptera
None
0.51%
5.5
Candidatus Blochmanniella pennsylvanica
RISB0254
Camponotus pennalicus
Order: Hymenoptera
None
0.45%
5.5
Arsenophonus
RISB1047
Aphis gossypii
Order: Hemiptera
secondary symbiont reduction led to reduction of the total life span and intrinsic rate of natural increase as well as appearance of the deformed dead offspring. H. defensa and Arsenophonus contributed to the fitness of A. gossypii by enhancing its performance, but not through parasitoid resistance.
0.33%
5.3
Candidatus Carsonella ruddii
RISB0748
Diaphorina citri
Order: Hemiptera
None
0.19%
5.2
Francisella
RISB1907
Bombyx mori
Order: Lepidoptera
After infection with F. tularensis, the induction of melanization and nodulation, which are immune responses to bacterial infection, were inhibited in silkworms. Pre-inoculation of silkworms with F. tularensis enhanced the expression of antimicrobial peptides and resistance to infection by pathogenic bacteria.
0.19%
5.2
Lactobacillus
RISB1866
Drosophila melanogaster
Order: Diptera
The bacterial cells may thus be able to ameliorate the pH of the acidic region, by the release of weak bases.Additionally, the bacteria have a complex relationship with physiological processes which may affect ionic homeostasis in the gut, such as nutrition and immune function
0.13%
5.1
Candidatus Steffania adelgidicola
RISB2278
Adelges nordmannianae/piceae
Order: Hemiptera
None
0.10%
5.1
Pectobacterium carotovorum
RISB1772
Muscidae
Order: Diptera
None
0.09%
5.1
Candidatus Legionella polyplacis
RISB1687
Polyplax serrata
Order: Phthiraptera
None
0.09%
5.1
Bifidobacterium
RISB0174
Apis mellifera
Order: Hymenoptera
Bifidobacterium provides complementary demethylation service to promote Gilliamella growth on methylated homogalacturonan, an enriched polysaccharide of pectin. In exchange, Gilliamella shares digestive products with Bifidobacterium, through which a positive interaction is established
0.09%
5.1
Candidatus Moranella endobia
RISB1588
Planococcus citri
Order: Hemiptera
None
0.08%
5.1
Arsenophonus
RISB1300
Aphis gossypii
Order: Hemiptera
Arsenophonus sp. can have different effects on its hosts, including obligate mutualism in blood-sucking insects, improving the performance of whiteflies, or through facultative mutualism by protecting psyllids against parasitoid attacks.
0.33%
5.1
Apibacter
RISB0603
Apis cerana
Order: Hymenoptera
The acquisition of genes for the degradation of the toxic monosaccharides potentiates Apibacter with the ability to utilize the pollen hydrolysis products, at the same time enabling monosaccharide detoxification for the host
0.11%
4.6
Arsenophonus
RISB1334
Ommatissus lybicus
Order: Hemiptera
the removal of Arsenophonus increased the developmental time of the immature stages and reduced the values of different life-history parameters including nymphal survival rate and adult longevity in the host
0.33%
4.5
Photorhabdus
RISB2532
Manduca sexta
Order: Lepidoptera
produces a small-molecule antibiotic (E)-1,3-dihydroxy-2-(isopropyl)-5-(2-phenylethenyl)benzene (ST) that also acts as an inhibitor of phenoloxidase (PO) in the insect host Manduca sexta.
0.16%
3.9
Bifidobacterium
RISB0616
Spodoptera frugiperda
Order: Lepidoptera
Strain wkB204 grew in the presence of amygdalin as the sole carbon source, suggesting that this strain degrades amygdalin and is not susceptible to the potential byproducts
0.09%
3.5
Lactobacillus
RISB0292
Lymantria dispar asiatica
Order: Lepidoptera
Beauveria bassiana infection-based assays showed that the mortality of non-axenic L. dispar asiatica larvae was significantly higher than that of axenic larvae at 72 h.
0.13%
3.5
Ignatzschineria
RISB0562
Chrysomya megacephala
Order: Diptera
Ignatzschineria indica is a Gram-negative bacterium commonly associated with maggot infestation and myiasis, a probable marker for myiasis diagnosis
0.22%
3.2
Lactobacillus
RISB0715
Spodoptera frugiperda
Order: Lepidoptera
Have the function of nutrient absorption, energy metabolism, the plant’s secondary metabolites degradation, insect immunity regulation, and so on
0.13%
3.0
Photorhabdus
RISB2573
Manduca sexta
Order: Lepidoptera
the bacteria are symbiotic with entomopathogenic nematodes but become pathogenic on release from the nematode into the insect blood system
0.16%
2.9
Bartonella
RISB1673
Apis mellifera
Order: Hymenoptera
a gut symbiont of insects and that the adaptation to blood-feeding insects facilitated colonization of the mammalian bloodstream
0.17%
2.7
Yersinia
RISB0492
Cimex hemipterus
Order: Hemiptera
the disruption of the abundant Yersinia possibly could be related to the enhanced susceptibility towards the insecticides
0.27%
2.7
Bacteroides
RISB0256
Leptocybe invasa
Order: Hymenoptera
Differences in Male-Killing Rickettsia Bacteria between Lineages of the Invasive Gall-Causing Pest Leptocybe invasa
0.38%
2.7
Psychrobacter
RISB1773
Calliphoridae
Order: Diptera
it shows physiological adaptation to survival in warmer temperatures and has been previously associated with food spoilage
0.12%
2.6
Bacteroides
RISB0090
Hyphantria cunea
Order: Lepidoptera
enhance the compatibility of invasive pests to new hosts and enable more rapid adaptation to new habitats.
0.38%
2.5
Liberibacter
RISB2310
Bactericerca cockerelli
Order: Hemiptera
manipulate plant signaling and defensive responses, suppress accumulation of defense transcripts like JA and SA
0.08%
2.3
Streptococcus
RISB2625
Galleria mellonella
Order: Lepidoptera
suppress bacteria ingested with food by producing bacteriocin and by releasing a lysozyme like enzyme
0.11%
2.1
Streptococcus
RISB2624
Reticulitermes flavipes
Order: Blattodea
can be broken down into substances such as carbon dioxide, ammonia and acetic acid
0.11%
1.8
Liberibacter
RISB2524
Bactericera cockerelli
Order: Hemiptera
Reduced expression of plant defensive gene in tomato probably for psyllid success
0.08%
1.7
Weeksella
RISB1265
Rheumatobates bergrothi
Order: Hemiptera
None
1.70%
1.7
Cupriavidus
RISB0694
Alydus tomentosus
Order: Hemiptera
None
1.61%
1.6
Photorhabdus
RISB0532
Drosophila melanogaster
Order: Diptera
produces toxin complex (Tc) toxins as major virulence factors
0.16%
1.4
Actinomyces
RISB1234
Hermetia illucens
Order: Diptera
provides the tools for degrading of a broad range of substrates
0.09%
1.4
Streptococcus
RISB2604
Homona magnanima
Order: Lepidoptera
influence the growth of Bacillus thuringiensis in the larvae
0.11%
1.3
Paraclostridium
RISB0028
Sesamia inferens
Order: Lepidoptera
degrade Chlorpyrifos and Chlorantraniliprole in vitro
0.07%
1.1
Liberibacter
RISB2333
Cacopsylla pyri
Order: Hemiptera
behaves as an endophyte rather than a pathogen
0.08%
1.0
Aeromonas
RISB2456
Bombyx mori
Order: Lepidoptera
able to utilize the CMcellulose and xylan
0.12%
0.9
Gilliamella
RISB0620
Spodoptera frugiperda
Order: Lepidoptera
degrade amygdalin
0.54%
0.9
Aeromonas
RISB2086
Aedes aegypti
Order: Diptera
axenic larvae cannot develop
0.12%
0.7
Gilliamella
RISB1945
Apis cerana
Order: Hymenoptera
None
0.54%
0.5
Priestia
RISB0839
Helicoverpa armigera
Order: Lepidoptera
producing amylase
0.14%
0.5
Candidatus Profftia
RISB1664
Adelgidae
Order: Hemiptera
None
0.40%
0.4
Flavobacterium
RISB0659
Melanaphis bambusae
Order: Hemiptera
None
0.33%
0.3
Yersinia
RISB0407
Anaphes nitens
Order: Hymenoptera
None
0.27%
0.3
Micromonospora
RISB2033
Palomena viridissima
Order: Hemiptera
None
0.16%
0.2
Ralstonia
RISB0243
Spodoptera frugiperda
Order: Lepidoptera
None
0.12%
0.1
Apibacter
RISB0604
Apis cerana
Order: Hymenoptera
None
0.11%
0.1
Metabacillus
RISB0902
Myzus persicae
Order: Hemiptera
None
0.10%
0.1
Bifidobacterium
RISB1944
Apis cerana
Order: Hymenoptera
None
0.09%
0.1
Helicobacter
RISB0662
Melanaphis bambusae
Order: Hemiptera
None
0.07%
0.1
Paraburkholderia
RISB0125
Physopelta gutta
Order: Hemiptera
None
0.06%
0.1
Candidatus Vallotia
RISB1665
Adelgidae
Order: Hemiptera
None
0.06%
0.1
Myroides
RISB0626
Musca altica
Order: Diptera
None
0.06%
0.1

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Taxonomic Analysis Files

Kraken Report

Detailed taxonomic classification

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Krona HTML

Interactive taxonomic visualization

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Bracken Results

Species abundance estimation

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Assembly & Gene Prediction

Assembled Contigs

MEGAHIT assembly results

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Predicted Genes

Gene sequences (FASTA)

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Gene Annotation

GFF format annotation

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Genome Binning

MetaBAT2 Bins

Compressed genome bins

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Bin Information

Quality metrics and statistics

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR28034360
509.7 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

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