SRR27812163 - Psilothrix viridicoeruleus

Basic Information

Run: SRR27812163

Assay Type: WGS

Bioproject: PRJNA1068458

Biosample: SAMN39671344

Bytes: 2398172139

Center Name: MAX PLANCK INSTITUTE FOR CHEMICAL ECOLOGY

Sequencing Information

Instrument: Illumina NovaSeq 6000

Library Layout: PAIRED

Library Selection: RANDOM

Platform: ILLUMINA

Geographic Information

Country: Germany

Continent: Europe

Location Name: Germany

Latitude/Longitude: 49.990637 N 8.239281 E

Sample Information

Host: Psilothrix viridicoeruleus

Isolation: -

Biosample Model: Metagenome or environmental

Collection Date: 2019

Taxonomic Classification

Potential Symbionts

Based on our current records database, this section aims to identify potential functional symbionts in this metagenome sample, with scoring based on:

  • Relative abundance in sample
  • Species-level matches with known symbionts
  • Host insect order matches
  • Functional record completeness

Note: Showing top 3 highest scoring records for each species/genus

Symbiont Name Record Host Species Function Abundance
Score
Buchnera aphidicola
RISB0236
Acyrthosiphon pisum
Order: Hemiptera
Buchnera the nutritional endosymbiont of A. pisum is located inside of bacteriocytes and requires aspartate from the aphid host, because it cannot make it de novo. Further Buchnera needs aspartate for the biosynthesis of the essential amino acids lysine and threonine, which the aphid and Buchnera require for survival
16.96%
27.0
Buchnera aphidicola
RISB2485
Macrosiphum euphorbiae
Order: Hemiptera
symbiont expression patterns differ between aphid clones with differing levels of virulence, and are influenced by the aphids' host plant. Potentially, symbionts may contribute to differential adaptation of aphids to host plant resistance
16.96%
26.7
Buchnera aphidicola
RISB0685
Acyrthosiphon pisum
Order: Hemiptera
It supplies the host with vitamins and essential amino acids, such as arginine and methionine that aphids cannot synthesize or derive insufficiently from their diet, the phloem sap of plants
16.96%
25.8
Escherichia coli
RISB0128
Tribolium castaneum
Order: Coleoptera
may produce 4,8-dimethyldecanal (DMD) production that is strongly associated with attraction to females and host pheromone communication
3.08%
20.8
Pseudomonas sp. REST10
RISB1622
Dendroctonus valens
Order: Coleoptera
volatiles from predominant bacteria regulate the consumption sequence of carbon sources d-pinitol and d-glucose in the fungal symbiont Leptographium procerum, and appear to alleviate the antagonistic effect from the fungus against RTB larvae
0.04%
19.9
Pseudomonas sp. KU43P
RISB1622
Dendroctonus valens
Order: Coleoptera
volatiles from predominant bacteria regulate the consumption sequence of carbon sources d-pinitol and d-glucose in the fungal symbiont Leptographium procerum, and appear to alleviate the antagonistic effect from the fungus against RTB larvae
0.01%
19.8
Acinetobacter sp. WCHAc010034
RISB0730
Curculio chinensis
Order: Coleoptera
Acinetobacter sp. in C. chinensis enriched after treating with saponin, and when incubating bacteria with saponin for 72 h, saponin content significantly decreased from 4.054 to 1.867 mg/mL (by 16S rRNA metagenome sequencing and HPLC)
0.13%
19.8
Acinetobacter sp. TGL-Y2
RISB0730
Curculio chinensis
Order: Coleoptera
Acinetobacter sp. in C. chinensis enriched after treating with saponin, and when incubating bacteria with saponin for 72 h, saponin content significantly decreased from 4.054 to 1.867 mg/mL (by 16S rRNA metagenome sequencing and HPLC)
0.08%
19.8
Acinetobacter sp. GSS19
RISB0730
Curculio chinensis
Order: Coleoptera
Acinetobacter sp. in C. chinensis enriched after treating with saponin, and when incubating bacteria with saponin for 72 h, saponin content significantly decreased from 4.054 to 1.867 mg/mL (by 16S rRNA metagenome sequencing and HPLC)
0.05%
19.7
Klebsiella oxytoca
RISB1506
Cleonus trivittatus
Order: Coleoptera
Antibiotic-treated larvae suffered growth retardation on a diet containing plant extract or swainsonine. Gut bacteria showed toxin-degradation activities in vitro
0.60%
18.8
Lactococcus lactis
RISB0967
Oulema melanopus
Order: Coleoptera
contribute to the decomposition of complex carbohydrates, fatty acids, or polysaccharides in the insect gut. It might also contribute to the improvement of nutrient availability.
0.01%
18.6
Pseudomonas sp. REST10
RISB2224
Leptinotarsa decemlineata
Order: Coleoptera
Colorado potato beetle (Leptinotarsa decemlineata) larvae exploit bacteria in their oral secretions to suppress antiherbivore defenses in tomato (Solanum lycopersicum)
0.04%
18.4
Enterobacter sp. SA187
RISB2221
Leptinotarsa decemlineata
Order: Coleoptera
Colorado potato beetle (Leptinotarsa decemlineata) larvae exploit bacteria in their oral secretions to suppress antiherbivore defenses in tomato (Solanum lycopersicum)
0.02%
18.4
Sphingobacterium sp. ML3W
RISB2227
Leptinotarsa decemlineata
Order: Coleoptera
Colorado potato beetle (Leptinotarsa decemlineata) larvae exploit bacteria in their oral secretions to suppress antiherbivore defenses in tomato (Solanum lycopersicum)
0.01%
18.4
Citrobacter freundii
RISB0517
Leptinotarsa decemlineata
Order: Coleoptera
affect the cellular and humoral immunity of the insect, increasing its susceptibility to Bacillus thuringiensis var. tenebrionis (morrisoni) (Bt)
0.03%
17.9
Morganella morganii
RISB1867
Costelytra zealandica
Order: Coleoptera
Female beetles were previously shown to use phenol as their sex pheromone produced by symbiotic bacteria in the accessory or colleterial gland
0.02%
17.9
Proteus vulgaris
RISB0001
Leptinotarsa decemlineata
Order: Coleoptera
produces toxic hydrogen cyanide (HCN) and a mandelonitrile-producing cyanoglucoside, amygdalin, which protect the insect from predation
0.11%
17.8
Citrobacter freundii
RISB0127
Tribolium castaneum
Order: Coleoptera
may produce 4,8-dimethyldecanal (DMD) production that is strongly associated with attraction to females and host pheromone communication
0.03%
17.8
Bacillus sp. T3
RISB1645
Osphranteria coerulescens
Order: Coleoptera
The isolate has cellulolytic activity and can hydrolyze CMC, avicel, cellulose and sawdust with broad temperature and pH stability
0.02%
17.6
Bacillus sp. DX3.1
RISB1645
Osphranteria coerulescens
Order: Coleoptera
The isolate has cellulolytic activity and can hydrolyze CMC, avicel, cellulose and sawdust with broad temperature and pH stability
0.01%
17.6
Enterobacter sp. SA187
RISB0496
Sitophilus oryzae
Order: Coleoptera
bacteria can degrade malathion, pirimiphos-methyl, and deltamethrin and utilize these insecticides as the carbon source in vitro.
0.02%
17.6
Bacillus sp. FJAT-52991
RISB1645
Osphranteria coerulescens
Order: Coleoptera
The isolate has cellulolytic activity and can hydrolyze CMC, avicel, cellulose and sawdust with broad temperature and pH stability
0.00%
17.6
Enterococcus faecalis
RISB0497
Cryptolestes ferrugineus
Order: Coleoptera
bacteria can degrade malathion, pirimiphos-methyl, and deltamethrin and utilize these insecticides as the carbon source in vitro.
0.02%
17.6
Enterococcus faecalis
RISB2042
Harpalus pensylvanicus
Order: Coleoptera
E. faecalis facilitate seed consumption by H. pensylvanicus, possibly by contributing digestive enzymes to their host
0.02%
17.4
Streptomyces sp. NBC_00162
RISB0777
Copris tripartitus
Order: Coleoptera
contribute brood ball hygiene by inhibiting fungal parasites in the environment
0.55%
17.1
Serratia marcescens
RISB1295
Nicrophorus vespilloides
Order: Coleoptera
producing antibacterial compound Serrawettin W2, which has antibacterial and nematode-inhibiting effects
0.01%
17.1
Enterobacter cloacae complex sp. ECNIH7
RISB1428
Rhynchophorus ferrugineus
Order: Coleoptera
promote the development and body mass gain of RPW larvae by improving their nutrition metabolism
0.08%
17.0
Lactococcus lactis
RISB1430
Rhynchophorus ferrugineus
Order: Coleoptera
promote the development and body mass gain of RPW larvae by improving their nutrition metabolism
0.01%
16.9
Morganella morganii
RISB1548
Costelytra zealandica
Order: Coleoptera
symbionts residing in the colleterial glands produce phenol 1 as the female sex pheromone
0.02%
16.8
Serratia marcescens
RISB0365
Pagiophloeus tsushimanus
Order: Coleoptera
terpenoid-degrading: the highest degradation rates of D-camphor, linalool, and eucalyptol
0.01%
16.8
Morganella morganii
RISB1868
Costelytra zealandica
Order: Coleoptera
produces phenol as the sex pheromone of the host from tyrosine in the colleterial gland
0.02%
16.8
Streptomyces sp. SUK 48
RISB0777
Copris tripartitus
Order: Coleoptera
contribute brood ball hygiene by inhibiting fungal parasites in the environment
0.08%
16.7
Streptomyces sp. T12
RISB0777
Copris tripartitus
Order: Coleoptera
contribute brood ball hygiene by inhibiting fungal parasites in the environment
0.04%
16.6
Enterococcus sp. DIV2402
RISB0807
Hypothenemus hampei
Order: Coleoptera
might contribute to caffeine breakdown using the C-10 oxidation pathway
0.05%
16.5
Erwinia sp. E602
RISB0808
Hypothenemus hampei
Order: Coleoptera
might contribute to caffeine breakdown using the C-12 oxidation pathway
0.01%
16.4
Paenibacillus sp. IHB B 3084
RISB0813
Hypothenemus hampei
Order: Coleoptera
might contribute to caffeine breakdown using the C-9 oxidation pathway
0.02%
16.4
Paenibacillus sp. N3/727
RISB0813
Hypothenemus hampei
Order: Coleoptera
might contribute to caffeine breakdown using the C-9 oxidation pathway
0.00%
16.4
Serratia marcescens
RISB1158
Nicrophorus vespilloides
Order: Coleoptera
produces an antibacterial cyclic lipopeptide called serrawettin W2
0.01%
16.3
Stenotrophomonas maltophilia
RISB0139
Tenebrio molitor
Order: Coleoptera
correlated with polyvinyl chloride PVC degradation
0.05%
16.1
Klebsiella pneumoniae
RISB1153
Tenebrio molitor
Order: Coleoptera
degrading plastics
0.52%
15.9
Aeromonas sp. FDAARGOS 1407
RISB1145
Tenebrio molitor
Order: Coleoptera
degrading plastics
0.01%
15.4
Staphylococcus epidermidis
RISB1070
Oryctes rhinoceros
Order: Coleoptera
gut microbe
0.10%
15.3
Staphylococcus hominis
RISB1071
Oryctes rhinoceros
Order: Coleoptera
gut microbe
0.02%
15.2
Lactococcus lactis
RISB1065
Oryctes rhinoceros
Order: Coleoptera
gut microbe
0.01%
15.2
Lysinibacillus fusiformis
RISB1066
Oryctes rhinoceros
Order: Coleoptera
gut microbe
0.01%
15.2
Pantoea agglomerans
RISB1858
Lissorhoptrus oryzophilus
Order: Coleoptera
None
0.01%
15.0
Burkholderia
RISB1172
Lagria villosa
Order: Coleoptera
process a cryptic gene cluster that codes for the biosynthesis of a novel antifungal polyketide with a glutarimide pharmacophore, which led to the discovery of the gladiofungins as previously-overlooked components of the antimicrobial armory of the beetle symbiont
0.01%
15.0
Rahnella
RISB1623
Dendroctonus valens
Order: Coleoptera
volatiles from predominant bacteria regulate the consumption sequence of carbon sources d-pinitol and d-glucose in the fungal symbiont Leptographium procerum, and appear to alleviate the antagonistic effect from the fungus against RTB larvae
0.00%
14.8
Burkholderia
RISB1729
Lagria hirta
Order: Coleoptera
the symbionts inhibit the growth of antagonistic fungi on the eggs of the insect host, indicating that the Lagria-associated Burkholderia have evolved from plant pathogenic ancestors into insect defensive mutualists
0.01%
14.3
Burkholderia
RISB1836
Dendroctonus valens
Order: Coleoptera
It can trongly degrade naringenin, and pinitol, the main soluble carbohydrate of P. tabuliformis, is retained in L. procerum-infected phloem and facilitate naringenin biodegradation by the microbiotas.
0.01%
14.0
Sodalis
RISB2035
Sitophilus oryzae
Order: Coleoptera
endosymbiont dynamics parallels numerous transcriptional changes in weevil developing adults and affects several biological processes, including metabolism and development
0.05%
13.5
Wolbachia
RISB1452
Octodonta nipae
Order: Coleoptera
Wolbachia harbored dominantly in a female than the male adult, while, no significant differences were observed between male and female body parts and tissues
0.18%
13.3
Sodalis
RISB2607
Sitophilus oryzae
Order: Coleoptera
induces the specific differentiation of the bacteriocytes, increases mitochondrial oxidative phosphorylation through the supply of pantothenic acid and riboflavin
0.05%
13.3
Sodalis
RISB1718
Sitophilus zeamais
Order: Coleoptera
we investigated the role of a quorum sensing(QS ) system in S. praecaptivus and found that it negatively regulates a potent insect-killing phenotype
0.05%
13.0
Vibrio
RISB1810
Monochamus galloprovincialis
Order: Coleoptera
Have the ability for degradation of cellulose, proteins and starch
1.61%
12.9
Wolbachia
RISB2107
Sitophilus zeamais
Order: Coleoptera
Wolbachia directly favored weevil fertility and exhibited only mild indirect effects, usually enhancing the SZPE effect
0.18%
12.6
Escherichia coli
RISB1339
Manduca sexta
Order: Lepidoptera
modulate immunity-related gene expression in the infected F0 larvae, and also in their offspring, triggered immune responses in the infected host associated with shifts in both DNA methylation and histone acetylation
3.08%
12.4
Bacteroides
RISB1183
Oryzaephilus surinamensis
Order: Coleoptera
supplement precursors for the cuticle synthesis and thereby enhance desiccation resistance of its host
0.19%
12.2
Rahnella
RISB1800
Dendroctonus valens
Order: Coleoptera
could alleviate or compromise the antagonistic effects of fungi O. minus and L. procerum on RTB larval growth
0.00%
12.2
Rahnella
RISB0741
Dendroctonus ponderosae
Order: Coleoptera
R. aquatilis decreased (−)-α-pinene (38%) and (+)-α-pinene (46%) by 40% and 45% (by GC-MS), respectively
0.00%
12.1
Wolbachia
RISB1282
Ips sp.
Order: Coleoptera
inducing cytoplasmic incompatibility, resulting in reproductive distortions and hence
0.18%
11.9
Corynebacterium
RISB0363
Pagiophloeus tsushimanus
Order: Coleoptera
terpenoid-degrading: the highest degradation rates of D-camphor, linalool, and eucalyptol
0.01%
11.8
Rickettsia
RISB1279
Ips sp.
Order: Coleoptera
inducing cytoplasmic incompatibility, resulting in reproductive distortions and hence
0.03%
11.7
Candidatus Nardonella
RISB2449
Euscepes postfasciatus
Order: Coleoptera
endosymbiont is involved in normal growth and development of the host weevil
0.13%
11.7
Rickettsia
RISB0970
Oulema melanopus
Order: Coleoptera
may be associated with insect reproduction and maturation of their sexual organs
0.03%
11.6
Candidatus Nardonella
RISB1931
Lissorhoptrus oryzophilus
Order: Coleoptera
might be not playing critical roles in the reproduction of L. oryzophilus
0.13%
11.6
Rhizobium
RISB0135
Coccinella septempunctata
Order: Coleoptera
be commonly found in plant roots and they all have nitrogen fixation abilities
0.02%
11.6
Rickettsia
RISB1954
Sitona obsoletus
Order: Coleoptera
potential defensive properties against he parasitoid Microctonus aethiopoides
0.03%
11.6
Bradyrhizobium
RISB0135
Coccinella septempunctata
Order: Coleoptera
be commonly found in plant roots and they all have nitrogen fixation abilities
0.01%
11.6
Nostoc
RISB0812
Hypothenemus hampei
Order: Coleoptera
might contribute to caffeine breakdown using the C-18 oxidation pathway
0.07%
11.5
Kosakonia
RISB0810
Hypothenemus hampei
Order: Coleoptera
might contribute to caffeine breakdown using the C-16 oxidation pathway
0.01%
11.4
Halomonas
RISB1808
Monochamus galloprovincialis
Order: Coleoptera
Have the ability for degradation of cellulose, proteins and starch
0.06%
11.4
Candidatus Nardonella
RISB1668
Multiple species
Order: Coleoptera
Possibly tyrosine precursor provisioning
0.13%
10.9
Turicibacter
RISB0451
Odontotaenius disjunctus
Order: Coleoptera
degrading  ellulose and xylan
0.06%
10.6
Klebsiella oxytoca
RISB0130
Ceratitis capitata
Order: Diptera
The intestinal microbiota structure was significantly influenced by the probiotic treatment while still maintaining a stable core dominant community of Enterobacteriacea. The  colony with these microbiome had the most improved potential functions in terms of gut microbes as well as the carbohydrates active enzymes most improved potential functions.
0.60%
10.6
Kosakonia
RISB1155
Tenebrio molitor
Order: Coleoptera
degrading plastics
0.01%
10.4
Rhodococcus
RISB1157
Tenebrio molitor
Order: Coleoptera
degrading plastics
0.01%
10.4
Candidatus Pantoea carbekii
RISB1046
Halyomorpha halys
Order: Hemiptera
provides its host with essential nutrients, vitamins, cofactors and protection of the most vulnerable stages of early development (1st nymphal stages). Pantoea carbekii is highly stress tolerant, especially once secreted to cover the eggs, by its unique biofilm-formation properties, securing host offspring survival
0.33%
10.3
Kluyvera
RISB1064
Oryctes rhinoceros
Order: Coleoptera
gut microbe
0.04%
10.3
Diaphorobacter
RISB1062
Oryctes rhinoceros
Order: Coleoptera
gut microbe
0.01%
10.2
Gilliamella apicola
RISB0102
Apis mellifera
Order: Hymenoptera
Gilliamella apicola carries the gene for the desaturase FADS2, which is able to metabolize polyunsaturated fatty acids from pollen and synthesize endocannabinoid, a lipogenic neuroactive substance, thereby modulating reward learning and memory in honeybees.
0.22%
10.2
Paenibacillus polymyxa
RISB2195
Termitidae
Order: Blattodea
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases that are secreted by gut microbiota to digest the structural and recalcitrant lignocellulosic residues in their foods.
0.09%
10.1
Dysgonomonas
RISB1481
Brachinus elongatulus
Order: Coleoptera
None
0.09%
10.1
Francisella tularensis
RISB1907
Bombyx mori
Order: Lepidoptera
After infection with F. tularensis, the induction of melanization and nodulation, which are immune responses to bacterial infection, were inhibited in silkworms. Pre-inoculation of silkworms with F. tularensis enhanced the expression of antimicrobial peptides and resistance to infection by pathogenic bacteria.
0.06%
10.1
Micromonospora
RISB2034
Harpalus sinicus
Order: Coleoptera
None
0.02%
10.0
Pantoea agglomerans
RISB2197
Termitidae
Order: Blattodea
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases that are secreted by gut microbiota to digest the structural and recalcitrant lignocellulosic residues in their foods.
0.01%
10.0
Listeria monocytogenes
RISB2308
Drosophila melanogaster
Order: Diptera
L. monocytogenes infection disrupts host energy metabolism by depleting energy stores (triglycerides and glycogen) and reducing metabolic pathway activity (beta-oxidation and glycolysis). The infection affects antioxidant defense by reducing uric acid levels and alters amino acid metabolism. These metabolic changes are accompanied by melanization, potentially linked to decreased tyrosine levels.
0.01%
10.0
Candidatus Nasuia deltocephalinicola
RISB2283
Nephotettix cincticeps
Order: Hemiptera
Oral administration of tetracycline to nymphal N. cincticeps resulted in retarded growth, high mortality rates, and failure in adult emergence, suggesting important biological roles of the symbionts for the host insect
0.01%
9.4
Candidatus Schneideria nysicola
RISB0872
Nysius sp.
Order: Hemiptera
synthesize four B vitamins(Pan, pantothenate;Fol, folate; Rib, riboflavin; Pyr, pyridoxine) and five Essential Amino Acids(Ile, isoleucine; Val, valine; Lys, lysine; Thr, threonine; Phe, phenylalanine)
0.26%
9.3
Clostridium sp. DL-VIII
RISB2301
Pyrrhocoris apterus
Order: Hemiptera
could play an important role for the insect by degrading complex dietary components, providing nutrient supplementation, or detoxifying noxious chemicals (e.g. cyclopropenoic fatty acids or gossypol) in the diet
0.06%
9.3
Clostridium sp. C1
RISB2301
Pyrrhocoris apterus
Order: Hemiptera
could play an important role for the insect by degrading complex dietary components, providing nutrient supplementation, or detoxifying noxious chemicals (e.g. cyclopropenoic fatty acids or gossypol) in the diet
0.04%
9.3
Clostridium sp. BNL1100
RISB2301
Pyrrhocoris apterus
Order: Hemiptera
could play an important role for the insect by degrading complex dietary components, providing nutrient supplementation, or detoxifying noxious chemicals (e.g. cyclopropenoic fatty acids or gossypol) in the diet
0.03%
9.3
Candidatus Carsonella ruddii
RISB0394
Cacopsylla pyricola
Order: Hemiptera
Carsonella produces most essential amino acids (EAAs) for C. pyricola, Psyllophila complements the genes missing in Carsonella for the tryptophan pathway and synthesizes some vitamins and carotenoids
0.10%
9.1
Mammaliicoccus sciuri
RISB0075
Bombyx mori
Order: Lepidoptera
could produce a secreted chitinolytic lysozyme (termed Msp1) to damage fungal cell walls,completely inhibit the spore germination of fungal entomopathogens Metarhizium robertsii and Beauveria bassiana
0.06%
9.1
Stenotrophomonas maltophilia
RISB1122
Bombyx mori
Order: Lepidoptera
facilitate host resistance against organophosphate insecticides, provides essential amino acids that increase host fitness and allow the larvae to better tolerate the toxic effects of the insecticide.
0.05%
9.1
Staphylococcus xylosus
RISB2497
Anticarsia gemmatalis
Order: Lepidoptera
allow the adaptation of this insect to plants rich in protease inhibitors, minimizing the potentially harmful consequences of protease inhibitors from some of this insect host plants, such as soybean
0.05%
9.0
Escherichia coli
RISB2120
Galleria mellonella
Order: Lepidoptera
mediate trans-generational immune priming
3.08%
8.9
Salmonella enterica
RISB0413
Melanaphis sacchari
Order: Hemiptera
None
3.75%
8.8
Candidatus Gullanella endobia
RISB1885
Ferrisia virgata
Order: Hemiptera
a nested symbiotic arrangement, where one bacterium lives inside another bacterium,occurred in building the mosaic metabolic pathways seen in mitochondria and plastids
0.28%
8.6
Candidatus Mikella endobia
RISB1887
Paracoccus marginatus
Order: Hemiptera
a nested symbiotic arrangement, where one bacterium lives inside another bacterium,occurred in building the mosaic metabolic pathways seen in mitochondria and plastids
0.24%
8.6
Wigglesworthia glossinidia
RISB0369
Glossina morsitans
Order: Diptera
symbiont-derived factors, likely B vitamins, are critical for the proper function of both lipid biosynthesis and lipolysis to maintain tsetse fly fecundity
0.45%
8.6
Candidatus Portiera aleyrodidarum
RISB1193
Bemisia tabaci
Order: Hemiptera
synthesizing essential amino acid (e.g. tryptophan, leucine and L-Isoleucine), Bemisia tabaci provides vital nutritional support for growth, development and reproduction
0.06%
8.4
Candidatus Moranella endobia
RISB2232
Planococcus citri
Order: Hemiptera
be responsible for the biosynthesis of most cellular components and energy provision, and controls most informational processes for the consortium
0.45%
8.4
Lactobacillus sp. IBH004
RISB0292
Lymantria dispar asiatica
Order: Lepidoptera
Beauveria bassiana infection-based assays showed that the mortality of non-axenic L. dispar asiatica larvae was significantly higher than that of axenic larvae at 72 h.
0.00%
8.4
Candidatus Doolittlea endobia
RISB1884
Maconellicoccus hirsutus
Order: Hemiptera
a nested symbiotic arrangement, where one bacterium lives inside another bacterium,occurred in building the mosaic metabolic pathways seen in mitochondria and plastids
0.01%
8.4
Spiroplasma sp. SV19
RISB1353
Cephus cinctus
Order: Hymenoptera
The bacterium also encoded biosynthetic pathways for essential vitamins B2, B3, and B9. We identified putative Spiroplasma virulence genes: cardiolipin and chitinase.
0.01%
8.3
Candidatus Ishikawella capsulata
RISB2368
Megacopta punctatissima
Order: Hemiptera
Microbe compensates for nutritional deficiency of host diet by supplying essential amino acids
1.40%
8.3
Blattabacterium cuenoti
RISB0133
Panesthiinae
Order: Blattodea
enables hosts to subsist on a nutrient-poor diet; endosymbiont genome erosions are associated with repeated host transitions to an underground life
0.31%
8.3
Candidatus Profftella armatura
RISB2147
Diaphorina citri
Order: Hemiptera
a defensive symbiont presumably of an obligate nature, which encoded horizontally acquired genes for synthesizing a novel polyketide toxin, diaphorin
0.07%
8.1
Candidatus Profftella armatura (Diaphorina cf. continua)
RISB2147
Diaphorina citri
Order: Hemiptera
a defensive symbiont presumably of an obligate nature, which encoded horizontally acquired genes for synthesizing a novel polyketide toxin, diaphorin
0.03%
8.0
Candidatus Profftella armatura
RISB2005
Diaphorina citri
Order: Hemiptera
produce proteins involved in polyketide biosynthesis,which were up-regulated in CLas(+) insects (associated with citrus greening disease)
0.07%
7.8
Stenotrophomonas maltophilia
RISB1227
Delia antiqua
Order: Diptera
six bacteria protect larvae from infection with the entomopathogen Beauveria bassiana through symbiotic bacterium-derived organic acids
0.05%
7.8
Citrobacter freundii
RISB1221
Delia antiqua
Order: Diptera
six bacteria protect larvae from infection with the entomopathogen Beauveria bassiana through symbiotic bacterium-derived organic acids
0.03%
7.7
Candidatus Tachikawaea gelatinosa
RISB2112
Urostylis westwoodii
Order: Hemiptera
the symbiont localizes to a specialized midgut region and supplies essential amino acids deficient in the host's diet
0.36%
7.7
Candidatus Nasuia deltocephalinicola
RISB2282
Nephotettix cincticeps
Order: Hemiptera
With the antibiotic, nymphal growth was remarkably retarded, and a number of nymphs either died or failed to attain adulthood
0.01%
7.5
Carnobacterium maltaromaticum
RISB1693
Plutella xylostella
Order: Lepidoptera
play an important role in the breakdown of plant cell walls, detoxification of plant phenolics, and synthesis of amino acids.
0.00%
7.5
Wigglesworthia glossinidia
RISB1786
Glossina morsitans
Order: Diptera
Synthesis of a large number of B vitamins, to supplement the host nutritional deficiencies of the diet
0.45%
7.5
Psychrobacter sp. LV10R520-6
RISB1773
Calliphoridae
Order: Diptera
it shows physiological adaptation to survival in warmer temperatures and has been previously associated with food spoilage
0.03%
7.5
Psychrobacter sp. van23A
RISB1773
Calliphoridae
Order: Diptera
it shows physiological adaptation to survival in warmer temperatures and has been previously associated with food spoilage
0.02%
7.5
Psychrobacter sp. DAB_AL43B
RISB1773
Calliphoridae
Order: Diptera
it shows physiological adaptation to survival in warmer temperatures and has been previously associated with food spoilage
0.00%
7.4
Candidatus Portiera aleyrodidarum
RISB2289
Bemisia tabaci
Order: Hemiptera
encoding the capability to synthetize, or participate in the synthesis of, several amino acids and carotenoids,
0.06%
7.3
Candidatus Nasuia deltocephalinicola
RISB0262
Maiestas dorsalis
Order: Hemiptera
are responsible for synthesizing two essential amino acids (histidine and methionine) and riboflavin (vitamin B2)
0.01%
7.3
Candidatus Rickettsiella viridis
RISB1949
Acyrthosiphon pisum
Order: Hemiptera
young red aphid larvae infected whith symbiont become greener at adulthood,which can reduce predation risk
0.15%
7.3
Candidatus Erwinia haradaeae
RISB1632
Lachninae
Order: Hemiptera
None
2.17%
7.2
Candidatus Ishikawella capsulata
RISB2543
Megacopta punctatissima
Order: Hemiptera
Enhance pest status of the insect host
1.40%
7.2
Candidatus Portiera aleyrodidarum
RISB1973
Bemisia tabaci
Order: Hemiptera
a primary symbiont, which compensates for the deficient nutritional composition of its food sources
0.06%
7.0
Snodgrassella alvi
RISB1423
Bombus spp.
Order: Hymenoptera
The bumble bee microbiome slightly increases survivorship when the host is exposed to selenate
0.01%
6.9
Candidatus Westeberhardia cardiocondylae
RISB1794
Cardiocondyla obscurior
Order: Hymenoptera
Contributes to cuticle formation and is responsible for host invasive success
0.27%
6.8
Frischella perrara
RISB2028
Diceroprocta semicincta
Order: Hemiptera
causes the formation of a scab-like structure on the gut epithelium of its host
0.18%
6.8
Candidatus Rickettsiella viridis
RISB0277
Myzus persicae
Order: Hemiptera
parasitoids showing a preference for probing aphids infected with R. viridis
0.15%
6.7
Blattabacterium sp. (Mastotermes darwiniensis)
RISB1534
Periplaneta fuliginosa
Order: Blattodea
involved in uric acid degradation, nitrogen assimilation and nutrient provisioning
0.01%
6.7
Carnobacterium maltaromaticum
RISB1692
Plutella xylostella
Order: Lepidoptera
participate in the synthesis of host lacking amino acids histidine and threonine
0.00%
6.6
Wigglesworthia glossinidia
RISB2577
Glossina brevipalpis
Order: Diptera
provide its tsetse host with metabolites such as vitamins
0.45%
6.6
Xenorhabdus bovienii
RISB2270
Acyrthosiphon pisum
Order: Hemiptera
have the gene PIN1 encoding the protease inhibitor protein against aphids
0.07%
6.5
Candidatus Westeberhardia cardiocondylae
RISB1795
Cardiocondyla obscurior
Order: Hymenoptera
a contribution of Westeberhardia to cuticle formation
0.27%
6.3
Arsenophonus
RISB1047
Aphis gossypii
Order: Hemiptera
secondary symbiont reduction led to reduction of the total life span and intrinsic rate of natural increase as well as appearance of the deformed dead offspring. H. defensa and Arsenophonus contributed to the fitness of A. gossypii by enhancing its performance, but not through parasitoid resistance.
1.25%
6.3
Candidatus Riesia pediculicola
RISB2452
Pediculus humanus humanus
Order: Phthiraptera
supplement body lice nutritionally deficient blood diet
0.05%
6.2
Proteus vulgaris
RISB2460
Bombyx mori
Order: Lepidoptera
degradation of cellulose, xylan, pectin and starch
0.11%
6.1
Lactiplantibacillus plantarum
RISB0674
Drosophila melanogaster
Order: Diptera
could effectively inhibit fungal spore germinations
0.01%
6.0
Candidatus Palibaumannia cicadellinicola
RISB1594
Graphocephala coccinea
Order: Hemiptera
None
1.02%
6.0
Blattabacterium cuenoti
RISB0518
Cryptocercus punctulatus
Order: Blattodea
collaborative arginine biosynthesis
0.31%
6.0
Lysinibacillus fusiformis
RISB1417
Psammotermes hypostoma
Order: Blattodea
isolates showed significant cellulolytic activity
0.01%
6.0
Arsenophonus
RISB1300
Aphis gossypii
Order: Hemiptera
Arsenophonus sp. can have different effects on its hosts, including obligate mutualism in blood-sucking insects, improving the performance of whiteflies, or through facultative mutualism by protecting psyllids against parasitoid attacks.
1.25%
6.0
Providencia rettgeri
RISB1001
Anastrepha obliqua
Order: Diptera
improve the sexual competitiveness of males
0.03%
5.9
Candidatus Annandia pinicola
RISB1661
Adelgidae
Order: Hemiptera
None
0.85%
5.9
Aeromonas sp. FDAARGOS 1407
RISB2456
Bombyx mori
Order: Lepidoptera
able to utilize the CMcellulose and xylan
0.01%
5.8
Carnobacterium maltaromaticum
RISB1691
Plutella xylostella
Order: Lepidoptera
activity of cellulose and hemicellulose
0.00%
5.8
Chryseobacterium sp. WX
RISB2092
Aedes aegypti
Order: Diptera
axenic larvae cannot develop
0.17%
5.7
Erwinia sp. E602
RISB1986
Bombyx mori
Order: Lepidoptera
producing cellulase and amylase
0.01%
5.6
Providencia rettgeri
RISB1169
Bactrocera dorsalis
Order: Diptera
Promote the growth of larvae
0.03%
5.6
Chryseobacterium sp. MEBOG06
RISB2092
Aedes aegypti
Order: Diptera
axenic larvae cannot develop
0.03%
5.6
Aeromonas sp. FDAARGOS 1407
RISB2086
Aedes aegypti
Order: Diptera
axenic larvae cannot develop
0.01%
5.6
Providencia alcalifaciens
RISB1168
Bactrocera dorsalis
Order: Diptera
Promote the growth of larvae
0.01%
5.6
Chryseobacterium sp. CY350
RISB2092
Aedes aegypti
Order: Diptera
axenic larvae cannot develop
0.01%
5.6
Microbacterium sp. zg-Y625
RISB2095
Aedes aegypti
Order: Diptera
axenic larvae cannot develop
0.01%
5.6
Candidatus Moranella endobia
RISB1588
Planococcus citri
Order: Hemiptera
None
0.45%
5.5
Arsenophonus
RISB1334
Ommatissus lybicus
Order: Hemiptera
the removal of Arsenophonus increased the developmental time of the immature stages and reduced the values of different life-history parameters including nymphal survival rate and adult longevity in the host
1.25%
5.4
Candidatus Annandia adelgestsuga
RISB2207
Adelges tsugae
Order: Hemiptera
None
0.39%
5.4
Gilliamella apicola
RISB1945
Apis cerana
Order: Hymenoptera
None
0.22%
5.2
Candidatus Legionella polyplacis
RISB1687
Polyplax serrata
Order: Phthiraptera
None
0.13%
5.1
Candidatus Blochmanniella pennsylvanica
RISB0254
Camponotus pennalicus
Order: Hymenoptera
None
0.12%
5.1
Candidatus Carsonella ruddii
RISB0748
Diaphorina citri
Order: Hemiptera
None
0.10%
5.1
Candidatus Regiella
RISB1370
Sitobion avenae
Order: Hemiptera
Regiella infection decreased the intrinsic rate of increase (rm) of aphids at 25 °C and 28 °C. However, at 31 °C, the effect of Regiella on the rm varied depending on the aphid genotype and density. Thus, the negative effects of this endosymbiont on its host were environmentally dependent.
0.10%
5.1
Candidatus Steffania adelgidicola
RISB2278
Adelges nordmannianae/piceae
Order: Hemiptera
None
0.05%
5.1
Candidatus Karelsulcia muelleri
RISB1591
Philaenus spumarius
Order: Hemiptera
None
0.03%
5.0
Flavobacterium johnsoniae
RISB0659
Melanaphis bambusae
Order: Hemiptera
None
0.02%
5.0
Snodgrassella alvi
RISB1947
Apis cerana
Order: Hymenoptera
None
0.01%
5.0
Lactiplantibacillus plantarum
RISB0608
Drosophila melanogaster
Order: Diptera
None
0.01%
5.0
Thauera sp. JM12B12
RISB1711
Phlebotomus papatasi
Order: Diptera
None
0.01%
5.0
Bosea sp. AS-1
RISB1702
Phlebotomus papatasi
Order: Diptera
None
0.01%
5.0
Thauera sp. K11
RISB1711
Phlebotomus papatasi
Order: Diptera
None
0.00%
5.0
Cupriavidus pauculus
RISB0694
Alydus tomentosus
Order: Hemiptera
None
0.00%
5.0
Agrobacterium tumefaciens
RISB0650
Melanaphis bambusae
Order: Hemiptera
None
0.00%
5.0
Treponema
RISB2377
termite
Order: Blattodea
when grown together, two termite-gut Treponema species influence each other's gene expression in a far more comprehensive and nuanced manner than might have been predicted based on the results of previous studies on the respective pure cultures
0.01%
4.9
Candidatus Regiella
RISB1819
Sitobion avenae
Order: Hemiptera
In R. insecticola-infected aphid lines, there were increases in plasticities for developmental times of first and second instar nymphs and for fecundity, showing novel functional roles of bacterial symbionts in plant-insect interactions.
0.10%
4.8
Apibacter
RISB0603
Apis cerana
Order: Hymenoptera
The acquisition of genes for the degradation of the toxic monosaccharides potentiates Apibacter with the ability to utilize the pollen hydrolysis products, at the same time enabling monosaccharide detoxification for the host
0.01%
4.5
Candidatus Regiella
RISB1363
Sitobion avenae
Order: Hemiptera
R. insecticola-infected aphids were more predated by the ladybird Hippodamia variegata irrespective of host plants and did not improve defences against coccinellid predators or metabolic rates on any host plants
0.10%
4.3
Photorhabdus
RISB2532
Manduca sexta
Order: Lepidoptera
produces a small-molecule antibiotic (E)-1,3-dihydroxy-2-(isopropyl)-5-(2-phenylethenyl)benzene (ST) that also acts as an inhibitor of phenoloxidase (PO) in the insect host Manduca sexta.
0.37%
4.1
Pectobacterium
RISB1889
Pseudococcus longispinus
Order: Hemiptera
a nested symbiotic arrangement, where one bacterium lives inside another bacterium,occurred in building the mosaic metabolic pathways seen in mitochondria and plastids
0.26%
3.6
Rhodococcus
RISB0775
Delia antiqua
Order: Diptera
showed significant contact inhibition activity against fungal entomopathogen Fusarium moniliforme, Botryosphaeria dothidea and both Fusarium oxysporum respectively
0.01%
3.3
Shewanella
RISB1924
Anopheles gambiae
Order: Diptera
may be related with mediating adaptation to different ecological niches or in shaping specific adult behaviors including mating
0.61%
3.2
Photorhabdus
RISB2573
Manduca sexta
Order: Lepidoptera
the bacteria are symbiotic with entomopathogenic nematodes but become pathogenic on release from the nematode into the insect blood system
0.37%
3.1
Bartonella
RISB1673
Apis mellifera
Order: Hymenoptera
a gut symbiont of insects and that the adaptation to blood-feeding insects facilitated colonization of the mammalian bloodstream
0.19%
2.8
Yersinia
RISB0492
Cimex hemipterus
Order: Hemiptera
the disruption of the abundant Yersinia possibly could be related to the enhanced susceptibility towards the insecticides
0.24%
2.7
Azospira
RISB1918
Anopheles gambiae
Order: Diptera
may be related with mediating adaptation to different ecological niches or in shaping specific adult behaviors including mating
0.00%
2.5
Bacteroides
RISB0256
Leptocybe invasa
Order: Hymenoptera
Differences in Male-Killing Rickettsia Bacteria between Lineages of the Invasive Gall-Causing Pest Leptocybe invasa
0.19%
2.5
Liberibacter
RISB2310
Bactericerca cockerelli
Order: Hemiptera
manipulate plant signaling and defensive responses, suppress accumulation of defense transcripts like JA and SA
0.07%
2.3
Bacteroides
RISB0090
Hyphantria cunea
Order: Lepidoptera
enhance the compatibility of invasive pests to new hosts and enable more rapid adaptation to new habitats.
0.19%
2.3
Streptococcus
RISB2625
Galleria mellonella
Order: Lepidoptera
suppress bacteria ingested with food by producing bacteriocin and by releasing a lysozyme like enzyme
0.26%
2.3
Blautia
RISB0091
Hyphantria cunea
Order: Lepidoptera
enhance the compatibility of invasive pests to new hosts and enable more rapid adaptation to new habitats.
0.01%
2.1
Apilactobacillus
RISB0475
Apis mellifera
Order: Hymenoptera
A. kunkeei alleviated acetamiprid-induced symbiotic microbiota dysregulation and mortality in honeybees
0.04%
2.1
Rhodococcus
RISB0430
Rhodnius prolixus
Order: Hemiptera
Rhodnius prolixus harbouring R. rhodnii developed faster, had higher survival, and laid more eggs
0.01%
2.0
Streptococcus
RISB2624
Reticulitermes flavipes
Order: Blattodea
can be broken down into substances such as carbon dioxide, ammonia and acetic acid
0.26%
1.9
Candidatus Zinderia
RISB2451
Clastoptera arizonana
Order: Hemiptera
Zinderia had gene homologs for the production of tryptophan, methionine, and histidine
0.01%
1.7
Liberibacter
RISB2524
Bactericera cockerelli
Order: Hemiptera
Reduced expression of plant defensive gene in tomato probably for psyllid success
0.07%
1.7
Corynebacterium
RISB0531
Helicoverpa armigera
Order: Lepidoptera
Corynebacterium sp. 2-TD, mediates the toxicity of the 2-tridecanone to H. armigera
0.01%
1.7
Photorhabdus
RISB0532
Drosophila melanogaster
Order: Diptera
produces toxin complex (Tc) toxins as major virulence factors
0.37%
1.6
Streptococcus
RISB2604
Homona magnanima
Order: Lepidoptera
influence the growth of Bacillus thuringiensis in the larvae
0.26%
1.5
Massilia
RISB2151
Osmia bicornis
Order: Hymenoptera
may be essential to support Osmia larvae in their nutrient uptake
0.06%
1.4
Dysgonomonas
RISB1235
Hermetia illucens
Order: Diptera
provides the tools for degrading of a broad range of substrates
0.09%
1.4
Diaphorobacter
RISB2150
Osmia bicornis
Order: Hymenoptera
may be essential to support Osmia larvae in their nutrient uptake
0.01%
1.3
Pectobacterium
RISB0798
Pseudoregma bambucicola
Order: Hemiptera
may help P. bambucicola feed on the stalks of bamboo
0.26%
1.3
Variovorax
RISB2153
Osmia bicornis
Order: Hymenoptera
may be essential to support Osmia larvae in their nutrient uptake
0.00%
1.3
Paraclostridium
RISB0028
Sesamia inferens
Order: Lepidoptera
degrade Chlorpyrifos and Chlorantraniliprole in vitro
0.03%
1.1
Dickeya
RISB1086
Rhodnius prolixus
Order: Hemiptera
supply enzymatic biosynthesis of B-complex vitamins
0.05%
1.1
Liberibacter
RISB2333
Cacopsylla pyri
Order: Hemiptera
behaves as an endophyte rather than a pathogen
0.07%
1.0
Brevibacterium
RISB0464
Acrida cinerea
Order: Orthoptera
correlated with the hemicellulose digestibility
0.01%
1.0
Corynebacterium
RISB2360
Bombyx mori
Order: Lepidoptera
producing lipase in a gut environment
0.01%
0.8
Brevibacterium
RISB2359
Bombyx mori
Order: Lepidoptera
producing lipase in a gut environment
0.01%
0.8
Candidatus Profftia
RISB1664
Adelgidae
Order: Hemiptera
None
0.76%
0.8
Cedecea
RISB1570
Bactrocera tau
Order: Diptera
could attract male and female B. tau
0.00%
0.7
Priestia
RISB0839
Helicoverpa armigera
Order: Lepidoptera
producing amylase
0.16%
0.5
Peribacillus
RISB1877
Aedes aegypti
Order: Diptera
gut microbiome
0.08%
0.4
Bombilactobacillus
RISB0617
Spodoptera frugiperda
Order: Lepidoptera
degrade amygdalin
0.01%
0.4
Candidatus Zinderia
RISB1640
Clastoptera arizonana
Order: Hemiptera
Nitrogen-Fixing
0.01%
0.3
Pectobacterium
RISB1772
Muscidae
Order: Diptera
None
0.26%
0.3
Yersinia
RISB0407
Anaphes nitens
Order: Hymenoptera
None
0.24%
0.2
Candidatus Vallotia
RISB1665
Adelgidae
Order: Hemiptera
None
0.18%
0.2
Vagococcus
RISB0042
Aldrichina grahami
Order: Diptera
None
0.09%
0.1
Helicobacter
RISB0662
Melanaphis bambusae
Order: Hemiptera
None
0.09%
0.1
Myroides
RISB0626
Musca altica
Order: Diptera
None
0.07%
0.1
Halomonas
RISB1374
Bemisia tabaci
Order: Hemiptera
None
0.06%
0.1
Neisseria
RISB0512
Plutella xylostella
Order: Lepidoptera
None
0.05%
0.1
Candidatus Phytoplasma
RISB1620
Cacopsylla pyricola
Order: Hemiptera
None
0.04%
0.0
Metabacillus
RISB0902
Myzus persicae
Order: Hemiptera
None
0.03%
0.0
Micromonospora
RISB2033
Palomena viridissima
Order: Hemiptera
None
0.02%
0.0
Treponema
RISB0169
Reticulitermes flaviceps
Order: Blattodea
None
0.01%
0.0
Apibacter
RISB0604
Apis cerana
Order: Hymenoptera
None
0.01%
0.0
Brevibacterium
RISB0897
Myzus persicae
Order: Hemiptera
None
0.01%
0.0
Paraburkholderia
RISB0125
Physopelta gutta
Order: Hemiptera
None
0.01%
0.0
Variovorax
RISB1712
Phlebotomus papatasi
Order: Diptera
None
0.00%
0.0
Cedecea
RISB0504
Plutella xylostella
Order: Lepidoptera
None
0.00%
0.0
Selenomonas
RISB1305
Aphis gossypii
Order: Hemiptera
None
0.00%
0.0

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