SRR27811408 - Dasytes aeratus

Basic Information

Run: SRR27811408

Assay Type: WGS

Bioproject: PRJNA1068458

Biosample: SAMN39670254

Bytes: 462875597

Center Name: MAX PLANCK INSTITUTE FOR CHEMICAL ECOLOGY

Sequencing Information

Instrument: NextSeq 2000

Library Layout: PAIRED

Library Selection: RANDOM

Platform: ILLUMINA

Geographic Information

Country: Germany

Continent: Europe

Location Name: Germany

Latitude/Longitude: 51.870740 N 10.999714 E

Sample Information

Host: Dasytes aeratus

Isolation: -

Biosample Model: Metagenome or environmental

Collection Date: 2014

Taxonomic Classification

Potential Symbionts

Based on our current records database, this section aims to identify potential functional symbionts in this metagenome sample, with scoring based on:

  • Relative abundance in sample
  • Species-level matches with known symbionts
  • Host insect order matches
  • Functional record completeness

Note: Showing top 3 highest scoring records for each species/genus

Symbiont Name Record Host Species Function Abundance
Score
Buchnera aphidicola
RISB0236
Acyrthosiphon pisum
Order: Hemiptera
Buchnera the nutritional endosymbiont of A. pisum is located inside of bacteriocytes and requires aspartate from the aphid host, because it cannot make it de novo. Further Buchnera needs aspartate for the biosynthesis of the essential amino acids lysine and threonine, which the aphid and Buchnera require for survival
19.23%
29.2
Buchnera aphidicola
RISB2485
Macrosiphum euphorbiae
Order: Hemiptera
symbiont expression patterns differ between aphid clones with differing levels of virulence, and are influenced by the aphids' host plant. Potentially, symbionts may contribute to differential adaptation of aphids to host plant resistance
19.23%
29.0
Buchnera aphidicola
RISB0685
Acyrthosiphon pisum
Order: Hemiptera
It supplies the host with vitamins and essential amino acids, such as arginine and methionine that aphids cannot synthesize or derive insufficiently from their diet, the phloem sap of plants
19.23%
28.0
Escherichia coli
RISB0128
Tribolium castaneum
Order: Coleoptera
may produce 4,8-dimethyldecanal (DMD) production that is strongly associated with attraction to females and host pheromone communication
6.45%
24.2
Pseudomonas sp. CIP-10
RISB1622
Dendroctonus valens
Order: Coleoptera
volatiles from predominant bacteria regulate the consumption sequence of carbon sources d-pinitol and d-glucose in the fungal symbiont Leptographium procerum, and appear to alleviate the antagonistic effect from the fungus against RTB larvae
1.39%
21.2
Acinetobacter sp. ANC 7912
RISB0730
Curculio chinensis
Order: Coleoptera
Acinetobacter sp. in C. chinensis enriched after treating with saponin, and when incubating bacteria with saponin for 72 h, saponin content significantly decreased from 4.054 to 1.867 mg/mL (by 16S rRNA metagenome sequencing and HPLC)
0.54%
20.2
Acinetobacter sp. YH12068_T
RISB0730
Curculio chinensis
Order: Coleoptera
Acinetobacter sp. in C. chinensis enriched after treating with saponin, and when incubating bacteria with saponin for 72 h, saponin content significantly decreased from 4.054 to 1.867 mg/mL (by 16S rRNA metagenome sequencing and HPLC)
0.27%
20.0
Acinetobacter sp. 10FS3-1
RISB0730
Curculio chinensis
Order: Coleoptera
Acinetobacter sp. in C. chinensis enriched after treating with saponin, and when incubating bacteria with saponin for 72 h, saponin content significantly decreased from 4.054 to 1.867 mg/mL (by 16S rRNA metagenome sequencing and HPLC)
0.10%
19.8
Pseudomonas sp. CIP-10
RISB2224
Leptinotarsa decemlineata
Order: Coleoptera
Colorado potato beetle (Leptinotarsa decemlineata) larvae exploit bacteria in their oral secretions to suppress antiherbivore defenses in tomato (Solanum lycopersicum)
1.39%
19.7
Citrobacter freundii
RISB0517
Leptinotarsa decemlineata
Order: Coleoptera
affect the cellular and humoral immunity of the insect, increasing its susceptibility to Bacillus thuringiensis var. tenebrionis (morrisoni) (Bt)
1.39%
19.3
Citrobacter freundii
RISB0127
Tribolium castaneum
Order: Coleoptera
may produce 4,8-dimethyldecanal (DMD) production that is strongly associated with attraction to females and host pheromone communication
1.39%
19.1
Proteus vulgaris
RISB0001
Leptinotarsa decemlineata
Order: Coleoptera
produces toxic hydrogen cyanide (HCN) and a mandelonitrile-producing cyanoglucoside, amygdalin, which protect the insect from predation
0.48%
18.2
Bacillus cereus
RISB1056
Oryctes rhinoceros
Order: Coleoptera
provide symbiotic digestive functions to Oryctes
2.09%
18.1
Bacillus cereus
RISB1778
Lissorhoptrus oryzophilus
Order: Coleoptera
might be promising paratransgenesis candidates
2.09%
18.0
Pseudomonas sp. CIP-10
RISB0815
Hypothenemus hampei
Order: Coleoptera
might contribute to caffeine breakdown using the C-15 oxidation pathway
1.39%
17.8
Bacillus sp. FJAT-18017
RISB1645
Osphranteria coerulescens
Order: Coleoptera
The isolate has cellulolytic activity and can hydrolyze CMC, avicel, cellulose and sawdust with broad temperature and pH stability
0.09%
17.7
Streptomyces sp. T12
RISB0777
Copris tripartitus
Order: Coleoptera
contribute brood ball hygiene by inhibiting fungal parasites in the environment
0.59%
17.2
Stenotrophomonas maltophilia
RISB0139
Tenebrio molitor
Order: Coleoptera
correlated with polyvinyl chloride PVC degradation
1.00%
17.0
Streptomyces sp. WAC00303
RISB0777
Copris tripartitus
Order: Coleoptera
contribute brood ball hygiene by inhibiting fungal parasites in the environment
0.35%
16.9
Streptomyces sp. SUK 48
RISB0777
Copris tripartitus
Order: Coleoptera
contribute brood ball hygiene by inhibiting fungal parasites in the environment
0.25%
16.8
Escherichia coli
RISB1339
Manduca sexta
Order: Lepidoptera
modulate immunity-related gene expression in the infected F0 larvae, and also in their offspring, triggered immune responses in the infected host associated with shifts in both DNA methylation and histone acetylation
6.45%
15.8
Staphylococcus
RISB0945
Callosobruchus maculatus
Order: Coleoptera
The strain encodes complete biosynthetic pathways for the production of B vitamins and amino acids, including tyrosine; A carbohydrate-active enzyme search revealed that the genome codes for a number of digestive enzymes, reflecting the nutritional ecology of C. maculatus
0.39%
15.4
Wolbachia
RISB1452
Octodonta nipae
Order: Coleoptera
Wolbachia harbored dominantly in a female than the male adult, while, no significant differences were observed between male and female body parts and tissues
1.63%
14.8
Lactococcus
RISB0967
Oulema melanopus
Order: Coleoptera
contribute to the decomposition of complex carbohydrates, fatty acids, or polysaccharides in the insect gut. It might also contribute to the improvement of nutrient availability.
0.52%
14.1
Wolbachia
RISB2107
Sitophilus zeamais
Order: Coleoptera
Wolbachia directly favored weevil fertility and exhibited only mild indirect effects, usually enhancing the SZPE effect
1.63%
14.0
Lactococcus
RISB0116
Novius pumilus
Order: Coleoptera
were predicted to have genes related to hydrocarbon, fatty acids, and chitin degradation, which may assist their hosts in digesting the wax shell covering the scale insects
0.52%
14.0
Wolbachia
RISB1282
Ips sp.
Order: Coleoptera
inducing cytoplasmic incompatibility, resulting in reproductive distortions and hence
1.63%
13.3
Vibrio
RISB1810
Monochamus galloprovincialis
Order: Coleoptera
Have the ability for degradation of cellulose, proteins and starch
1.78%
13.1
Staphylococcus
RISB0946
Callosobruchus maculatus
Order: Coleoptera
The strain encodes complete biosynthetic pathways for the production of B vitamins and amino acids, including tyrosine
0.39%
12.8
Bacteroides
RISB1183
Oryzaephilus surinamensis
Order: Coleoptera
supplement precursors for the cuticle synthesis and thereby enhance desiccation resistance of its host
0.47%
12.5
Lactococcus
RISB1430
Rhynchophorus ferrugineus
Order: Coleoptera
promote the development and body mass gain of RPW larvae by improving their nutrition metabolism
0.52%
12.4
Escherichia coli
RISB2120
Galleria mellonella
Order: Lepidoptera
mediate trans-generational immune priming
6.45%
12.3
Nostoc
RISB0812
Hypothenemus hampei
Order: Coleoptera
might contribute to caffeine breakdown using the C-18 oxidation pathway
0.15%
11.6
Paenibacillus
RISB0813
Hypothenemus hampei
Order: Coleoptera
might contribute to caffeine breakdown using the C-9 oxidation pathway
0.13%
11.5
Cronobacter
RISB0247
Tenebrio molitor
Order: Coleoptera
may be indirectly involved in the digestion of PE
0.21%
11.2
Trabulsiella
RISB1685
Melolontha hippocastani
Order: Coleoptera
Involved in cellulose degradation
0.17%
10.8
Candidatus Pantoea carbekii
RISB1046
Halyomorpha halys
Order: Hemiptera
provides its host with essential nutrients, vitamins, cofactors and protection of the most vulnerable stages of early development (1st nymphal stages). Pantoea carbekii is highly stress tolerant, especially once secreted to cover the eggs, by its unique biofilm-formation properties, securing host offspring survival
0.62%
10.6
Staphylococcus
RISB1070
Oryctes rhinoceros
Order: Coleoptera
gut microbe
0.39%
10.6
Arsenophonus sp. aPb
RISB1047
Aphis gossypii
Order: Hemiptera
secondary symbiont reduction led to reduction of the total life span and intrinsic rate of natural increase as well as appearance of the deformed dead offspring. H. defensa and Arsenophonus contributed to the fitness of A. gossypii by enhancing its performance, but not through parasitoid resistance.
0.35%
10.4
Gilliamella apicola
RISB0102
Apis mellifera
Order: Hymenoptera
Gilliamella apicola carries the gene for the desaturase FADS2, which is able to metabolize polyunsaturated fatty acids from pollen and synthesize endocannabinoid, a lipogenic neuroactive substance, thereby modulating reward learning and memory in honeybees.
0.26%
10.3
Francisella tularensis
RISB1907
Bombyx mori
Order: Lepidoptera
After infection with F. tularensis, the induction of melanization and nodulation, which are immune responses to bacterial infection, were inhibited in silkworms. Pre-inoculation of silkworms with F. tularensis enhanced the expression of antimicrobial peptides and resistance to infection by pathogenic bacteria.
0.21%
10.2
Arsenophonus sp. aPb
RISB1300
Aphis gossypii
Order: Hemiptera
Arsenophonus sp. can have different effects on its hosts, including obligate mutualism in blood-sucking insects, improving the performance of whiteflies, or through facultative mutualism by protecting psyllids against parasitoid attacks.
0.35%
10.1
Stenotrophomonas maltophilia
RISB1122
Bombyx mori
Order: Lepidoptera
facilitate host resistance against organophosphate insecticides, provides essential amino acids that increase host fitness and allow the larvae to better tolerate the toxic effects of the insecticide.
1.00%
10.0
Candidatus Nasuia deltocephalinicola
RISB2283
Nephotettix cincticeps
Order: Hemiptera
Oral administration of tetracycline to nymphal N. cincticeps resulted in retarded growth, high mortality rates, and failure in adult emergence, suggesting important biological roles of the symbionts for the host insect
0.07%
9.4
Pantoea ananatis
RISB1671
Spodoptera frugiperda
Order: Lepidoptera
modulate plant defense, downregulated the activity of the plant defensive proteins polyphenol oxidase and trypsin proteinase inhibitors (trypsin PI) but upregulated peroxidase (POX) activity in tomatoresponses
0.15%
9.3
Candidatus Schneideria nysicola
RISB0872
Nysius sp.
Order: Hemiptera
synthesize four B vitamins(Pan, pantothenate;Fol, folate; Rib, riboflavin; Pyr, pyridoxine) and five Essential Amino Acids(Ile, isoleucine; Val, valine; Lys, lysine; Thr, threonine; Phe, phenylalanine)
0.30%
9.3
Clostridium sp. MB40-C1
RISB2301
Pyrrhocoris apterus
Order: Hemiptera
could play an important role for the insect by degrading complex dietary components, providing nutrient supplementation, or detoxifying noxious chemicals (e.g. cyclopropenoic fatty acids or gossypol) in the diet
0.08%
9.3
Citrobacter freundii
RISB1221
Delia antiqua
Order: Diptera
six bacteria protect larvae from infection with the entomopathogen Beauveria bassiana through symbiotic bacterium-derived organic acids
1.39%
9.1
Candidatus Carsonella ruddii
RISB0394
Cacopsylla pyricola
Order: Hemiptera
Carsonella produces most essential amino acids (EAAs) for C. pyricola, Psyllophila complements the genes missing in Carsonella for the tryptophan pathway and synthesizes some vitamins and carotenoids
0.10%
9.1
Stenotrophomonas maltophilia
RISB1227
Delia antiqua
Order: Diptera
six bacteria protect larvae from infection with the entomopathogen Beauveria bassiana through symbiotic bacterium-derived organic acids
1.00%
8.7
Salmonella enterica
RISB0413
Melanaphis sacchari
Order: Hemiptera
None
3.65%
8.7
Candidatus Mikella endobia
RISB1887
Paracoccus marginatus
Order: Hemiptera
a nested symbiotic arrangement, where one bacterium lives inside another bacterium,occurred in building the mosaic metabolic pathways seen in mitochondria and plastids
0.17%
8.5
Blattabacterium cuenoti
RISB0133
Panesthiinae
Order: Blattodea
enables hosts to subsist on a nutrient-poor diet; endosymbiont genome erosions are associated with repeated host transitions to an underground life
0.56%
8.5
Candidatus Gullanella endobia
RISB1885
Ferrisia virgata
Order: Hemiptera
a nested symbiotic arrangement, where one bacterium lives inside another bacterium,occurred in building the mosaic metabolic pathways seen in mitochondria and plastids
0.10%
8.4
Candidatus Hoaglandella endobia
RISB1886
Trionymus perrisii
Order: Hemiptera
a nested symbiotic arrangement, where one bacterium lives inside another bacterium,occurred in building the mosaic metabolic pathways seen in mitochondria and plastids
0.10%
8.4
Arsenophonus sp. aPb
RISB1048
Aphis gossypii
Order: Hemiptera
symbiont reduction led to reduction of the total life span and intrinsic rate of natural increase as well as appearance of the deformed dead offspring
0.35%
8.4
Wigglesworthia glossinidia
RISB0369
Glossina morsitans
Order: Diptera
symbiont-derived factors, likely B vitamins, are critical for the proper function of both lipid biosynthesis and lipolysis to maintain tsetse fly fecundity
0.19%
8.3
Candidatus Moranella endobia
RISB2232
Planococcus citri
Order: Hemiptera
be responsible for the biosynthesis of most cellular components and energy provision, and controls most informational processes for the consortium
0.22%
8.1
Candidatus Tachikawaea gelatinosa
RISB2112
Urostylis westwoodii
Order: Hemiptera
the symbiont localizes to a specialized midgut region and supplies essential amino acids deficient in the host's diet
0.49%
7.8
Candidatus Ishikawella capsulata
RISB2368
Megacopta punctatissima
Order: Hemiptera
Microbe compensates for nutritional deficiency of host diet by supplying essential amino acids
0.84%
7.7
Candidatus Nasuia deltocephalinicola
RISB2282
Nephotettix cincticeps
Order: Hemiptera
With the antibiotic, nymphal growth was remarkably retarded, and a number of nymphs either died or failed to attain adulthood
0.07%
7.6
Candidatus Nasuia deltocephalinicola
RISB0262
Maiestas dorsalis
Order: Hemiptera
are responsible for synthesizing two essential amino acids (histidine and methionine) and riboflavin (vitamin B2)
0.07%
7.3
Wigglesworthia glossinidia
RISB1786
Glossina morsitans
Order: Diptera
Synthesis of a large number of B vitamins, to supplement the host nutritional deficiencies of the diet
0.19%
7.2
Pantoea ananatis
RISB0515
Laodelphax striatellus
Order: Hemiptera
pathogenic to the host insect, raises the possibility of using the Lstr strain as a biological agent
0.15%
7.2
Frischella perrara
RISB2028
Diceroprocta semicincta
Order: Hemiptera
causes the formation of a scab-like structure on the gut epithelium of its host
0.26%
6.8
Candidatus Westeberhardia cardiocondylae
RISB1794
Cardiocondyla obscurior
Order: Hymenoptera
Contributes to cuticle formation and is responsible for host invasive success
0.17%
6.7
Candidatus Ishikawella capsulata
RISB2543
Megacopta punctatissima
Order: Hemiptera
Enhance pest status of the insect host
0.84%
6.6
Proteus vulgaris
RISB2460
Bombyx mori
Order: Lepidoptera
degradation of cellulose, xylan, pectin and starch
0.48%
6.5
Candidatus Erwinia haradaeae
RISB1632
Lachninae
Order: Hemiptera
None
1.36%
6.4
Wigglesworthia glossinidia
RISB2577
Glossina brevipalpis
Order: Diptera
provide its tsetse host with metabolites such as vitamins
0.19%
6.3
Blattabacterium cuenoti
RISB0518
Cryptocercus punctulatus
Order: Blattodea
collaborative arginine biosynthesis
0.56%
6.3
Candidatus Westeberhardia cardiocondylae
RISB1795
Cardiocondyla obscurior
Order: Hymenoptera
a contribution of Westeberhardia to cuticle formation
0.17%
6.2
Candidatus Riesia pediculicola
RISB2452
Pediculus humanus humanus
Order: Phthiraptera
supplement body lice nutritionally deficient blood diet
0.10%
6.2
Candidatus Blochmanniella
RISB2542
Camponotus
Order: Hymenoptera
Blochmannia provide essential amino acids to its host,Camponotus floridanus, and that it may also play a role in nitrogen recycling via its functional urease
3.03%
6.2
Candidatus Blochmanniella
RISB1827
Camponotus floridanus
Order: Hymenoptera
a modulation of immune gene expression which may facilitate tolerance towards the endosymbionts and thus may contribute to their transovarial transmission
3.03%
6.1
Blattabacterium cuenoti
RISB0093
Blattella germanica
Order: Blattodea
obligate endosymbiont
0.56%
6.0
Candidatus Blochmanniella
RISB2448
Camponotus floridanus
Order: Hymenoptera
nutritional contribution of the bacteria to host metabolism by production of essential amino acids and urease-mediated nitrogen recycling
3.03%
5.8
Providencia alcalifaciens
RISB1168
Bactrocera dorsalis
Order: Diptera
Promote the growth of larvae
0.11%
5.7
Candidatus Palibaumannia cicadellinicola
RISB1594
Graphocephala coccinea
Order: Hemiptera
None
0.42%
5.4
Candidatus Annandia pinicola
RISB1661
Adelgidae
Order: Hemiptera
None
0.33%
5.3
Gilliamella apicola
RISB1945
Apis cerana
Order: Hymenoptera
None
0.26%
5.3
Candidatus Moranella endobia
RISB1588
Planococcus citri
Order: Hemiptera
None
0.22%
5.2
Trabulsiella
RISB2201
Termitidae
Order: Blattodea
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases that are secreted by gut microbiota to digest the structural and recalcitrant lignocellulosic residues in their foods.
0.17%
5.2
Candidatus Legionella polyplacis
RISB1687
Polyplax serrata
Order: Phthiraptera
None
0.14%
5.1
Paenibacillus
RISB2195
Termitidae
Order: Blattodea
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases that are secreted by gut microbiota to digest the structural and recalcitrant lignocellulosic residues in their foods.
0.13%
5.1
Candidatus Steffania adelgidicola
RISB2278
Adelges nordmannianae/piceae
Order: Hemiptera
None
0.11%
5.1
Candidatus Carsonella ruddii
RISB0748
Diaphorina citri
Order: Hemiptera
None
0.10%
5.1
Listeria
RISB2308
Drosophila melanogaster
Order: Diptera
L. monocytogenes infection disrupts host energy metabolism by depleting energy stores (triglycerides and glycogen) and reducing metabolic pathway activity (beta-oxidation and glycolysis). The infection affects antioxidant defense by reducing uric acid levels and alters amino acid metabolism. These metabolic changes are accompanied by melanization, potentially linked to decreased tyrosine levels.
0.09%
5.1
Apibacter
RISB0603
Apis cerana
Order: Hymenoptera
The acquisition of genes for the degradation of the toxic monosaccharides potentiates Apibacter with the ability to utilize the pollen hydrolysis products, at the same time enabling monosaccharide detoxification for the host
0.11%
4.6
Xanthomonas
RISB0498
Xylocopa appendiculata
Order: Hymenoptera
Xanthomonas strain from Japanese carpenter bee is effective PU-degradable bacterium and is able to use polyacryl-based PU as a nutritional source, as well as other types of PS-PU and PE-PU
0.33%
4.1
Mammaliicoccus
RISB0075
Bombyx mori
Order: Lepidoptera
could produce a secreted chitinolytic lysozyme (termed Msp1) to damage fungal cell walls,completely inhibit the spore germination of fungal entomopathogens Metarhizium robertsii and Beauveria bassiana
0.09%
4.1
Photorhabdus
RISB2532
Manduca sexta
Order: Lepidoptera
produces a small-molecule antibiotic (E)-1,3-dihydroxy-2-(isopropyl)-5-(2-phenylethenyl)benzene (ST) that also acts as an inhibitor of phenoloxidase (PO) in the insect host Manduca sexta.
0.21%
4.0
Paenibacillus
RISB0774
Delia antiqua
Order: Diptera
showed significant contact inhibition activity against fungal entomopathogen Fusarium moniliforme, Botryosphaeria dothidea and both Fusarium oxysporum respectively
0.13%
3.4
Shewanella
RISB1924
Anopheles gambiae
Order: Diptera
may be related with mediating adaptation to different ecological niches or in shaping specific adult behaviors including mating
0.53%
3.1
Photorhabdus
RISB2573
Manduca sexta
Order: Lepidoptera
the bacteria are symbiotic with entomopathogenic nematodes but become pathogenic on release from the nematode into the insect blood system
0.21%
3.0
Yersinia
RISB0492
Cimex hemipterus
Order: Hemiptera
the disruption of the abundant Yersinia possibly could be related to the enhanced susceptibility towards the insecticides
0.54%
3.0
Bacteroides
RISB0256
Leptocybe invasa
Order: Hymenoptera
Differences in Male-Killing Rickettsia Bacteria between Lineages of the Invasive Gall-Causing Pest Leptocybe invasa
0.47%
2.8
Bacteroides
RISB0090
Hyphantria cunea
Order: Lepidoptera
enhance the compatibility of invasive pests to new hosts and enable more rapid adaptation to new habitats.
0.47%
2.6
Xanthomonas
RISB0217
Xylocopa appendiculata
Order: Hymenoptera
strains biodegraded polyethylene terephthalate PET powder, broke it into its degradation products
0.33%
2.3
Streptococcus
RISB2625
Galleria mellonella
Order: Lepidoptera
suppress bacteria ingested with food by producing bacteriocin and by releasing a lysozyme like enzyme
0.15%
2.2
Xenorhabdus
RISB1372
Spodoptera frugiperda
Order: Lepidoptera
the products of the symbiont gene cluster inhibit Spodoptera frugiperda phenoloxidase activity
0.28%
2.2
Candidatus Zinderia
RISB2451
Clastoptera arizonana
Order: Hemiptera
Zinderia had gene homologs for the production of tryptophan, methionine, and histidine
0.10%
1.8
Streptococcus
RISB2624
Reticulitermes flavipes
Order: Blattodea
can be broken down into substances such as carbon dioxide, ammonia and acetic acid
0.15%
1.8
Xenorhabdus
RISB2270
Acyrthosiphon pisum
Order: Hemiptera
have the gene PIN1 encoding the protease inhibitor protein against aphids
0.28%
1.7
Photorhabdus
RISB0532
Drosophila melanogaster
Order: Diptera
produces toxin complex (Tc) toxins as major virulence factors
0.21%
1.4
Streptococcus
RISB2604
Homona magnanima
Order: Lepidoptera
influence the growth of Bacillus thuringiensis in the larvae
0.15%
1.4
Candidatus Profftia
RISB1664
Adelgidae
Order: Hemiptera
None
0.83%
0.8
Cupriavidus
RISB0694
Alydus tomentosus
Order: Hemiptera
None
0.72%
0.7
Flavobacterium
RISB0659
Melanaphis bambusae
Order: Hemiptera
None
0.60%
0.6
Yersinia
RISB0407
Anaphes nitens
Order: Hymenoptera
None
0.54%
0.5
Priestia
RISB0839
Helicoverpa armigera
Order: Lepidoptera
producing amylase
0.15%
0.5
Candidatus Zinderia
RISB1640
Clastoptera arizonana
Order: Hemiptera
Nitrogen-Fixing
0.10%
0.4
Neisseria
RISB0512
Plutella xylostella
Order: Lepidoptera
None
0.25%
0.3
Vagococcus
RISB0042
Aldrichina grahami
Order: Diptera
None
0.15%
0.2
Apibacter
RISB0604
Apis cerana
Order: Hymenoptera
None
0.11%
0.1
Helicobacter
RISB0662
Melanaphis bambusae
Order: Hemiptera
None
0.09%
0.1

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Taxonomic Analysis Files

Kraken Report

Detailed taxonomic classification

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Krona HTML

Interactive taxonomic visualization

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Bracken Results

Species abundance estimation

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Assembly & Gene Prediction

Assembled Contigs

MEGAHIT assembly results

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Predicted Genes

Gene sequences (FASTA)

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Gene Annotation

GFF format annotation

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Genome Binning

MetaBAT2 Bins

Compressed genome bins

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Bin Information

Quality metrics and statistics

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR27811408
441.4 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

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