SRR24762878 - Aedes albopictus

Basic Information

Run: SRR24762878

Assay Type: WGS

Bioproject: PRJNA918574

Biosample: SAMN35436884

Bytes: 3292595883

Center Name: EVANDRO CHAGAS INSTITUTE

Sequencing Information

Instrument: NextSeq 500

Library Layout: PAIRED

Library Selection: cDNA

Platform: ILLUMINA

Geographic Information

Country: Brazil

Continent: South America

Location Name: Brazil: Canaa dos Carajas\, Para State

Latitude/Longitude: 6.538529 S 49.854874 W

Sample Information

Host: Aedes albopictus

Isolation: Canaa dos Carajas\, City

Biosample Model: Metagenome or environmental

Collection Date: 2019-02

Taxonomic Classification

Potential Symbionts

Based on our current records database, this section aims to identify potential functional symbionts in this metagenome sample, with scoring based on:

  • Relative abundance in sample
  • Species-level matches with known symbionts
  • Host insect order matches
  • Functional record completeness

Note: Showing top 3 highest scoring records for each species/genus

Symbiont Name Record Host Species Function Abundance
Score
Wolbachia pipientis
RISB2617
Aedes albopictus
Order: Diptera
induces cytoplasmic incompatibility
5.12%
40.8
Wolbachia pipientis
RISB1965
Aedes albopictus
Order: Diptera
None
5.12%
40.1
Klebsiella pneumoniae
RISB1771
Muscidae
Order: Diptera
None
17.32%
32.3
Klebsiella pneumoniae
RISB2185
Scirpophaga incertulas
Order: Lepidoptera
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases that are secreted by gut microbiota to digest the structural and recalcitrant lignocellulosic residues in their foods.
17.32%
27.3
Wolbachia pipientis
RISB0766
Aedes fluviatilis
Order: Diptera
The presence of Wolbachia pipientis improves energy performance in A. fluviatilis cells; it affects the regulation of key energy sources such as lipids, proteins, and carbohydrates, making the distribution of actin more peripheral and with extensions that come into contact with neighboring cells.
5.12%
25.1
Escherichia coli
RISB1769
Calliphoridae
Order: Diptera
None
9.31%
24.3
Klebsiella pneumoniae
RISB2459
Bombyx mori
Order: Lepidoptera
degradation of cellulose, xylan, pectin and starch
17.32%
23.3
Stenotrophomonas maltophilia
RISB1227
Delia antiqua
Order: Diptera
six bacteria protect larvae from infection with the entomopathogen Beauveria bassiana through symbiotic bacterium-derived organic acids
4.47%
22.2
Stenotrophomonas maltophilia
RISB1141
Hermetia illucens
Order: Diptera
enhance the insect growth performance when reared on an unbalanced nutritionally poor diet
4.47%
21.3
Stenotrophomonas maltophilia
RISB1401
Delia antiqua
Order: Diptera
suppressed Beauveria bassiana conidia germination and hyphal growth
4.47%
20.8
Enterobacter sp. T2
RISB0893
Bactrocera dorsalis
Order: Diptera
be beneficial, with some quality control indices, such as adult size, pupal weight, survival rate under stress and nutritionally rich conditions, and mating competitiveness, being significantly increased, while slight nonsignificant increases in emergence rate and flight ability were observed
0.10%
20.1
Lactococcus lactis
RISB0131
Ceratitis capitata
Order: Diptera
The intestinal microbiota structure was significantly influenced by the probiotic treatment while still maintaining a stable core dominant community of Enterobacteriacea. The  colony with these microbiome had the most improved potential functions in terms of gut microbes as well as the carbohydrates active enzymes most improved potential functions.
0.01%
20.0
Enterobacter sp. T2
RISB1338
Ceratitis capitata
Order: Diptera
Enterobacter sp. AA26 dry biomass can fully replace the brewer’s yeast as a protein source in medfly larval diet without any effect on the productivity and the biological quality of reared medfly of VIENNA 8 GSS
0.10%
19.3
Serratia marcescens
RISB1291
Aedes aegypti
Order: Diptera
facilitates arboviral infection through a secreted protein named SmEnhancin, which digests membrane-bound mucins on the mosquito gut epithelia, thereby enhancing viral dissemination.
0.02%
18.7
Escherichia coli
RISB1339
Manduca sexta
Order: Lepidoptera
modulate immunity-related gene expression in the infected F0 larvae, and also in their offspring, triggered immune responses in the infected host associated with shifts in both DNA methylation and histone acetylation
9.31%
18.6
Enterobacter hormaechei
RISB1331
Zeugodacus cucurbitae
Order: Diptera
None
3.44%
18.4
Paenibacillus sp. 37
RISB0774
Delia antiqua
Order: Diptera
showed significant contact inhibition activity against fungal entomopathogen Fusarium moniliforme, Botryosphaeria dothidea and both Fusarium oxysporum respectively
0.04%
18.3
Morganella morganii
RISB0772
Delia antiqua
Order: Diptera
showed significant volatile inhibition activity against fungal entomopathogen Fusarium moniliforme, Botryosphaeria dothidea and both Fusarium oxysporum respectively
0.01%
18.3
Lactococcus lactis
RISB0113
Bactrocera dorsalis
Order: Diptera
increase the resistance of B. dorsalis to β-cypermethrin by regulating cytochrome P450 (P450) enzymes and α-glutathione S-transferase (GST) activities
0.01%
18.0
Morganella morganii
RISB0008
Phormia regina
Order: Diptera
deterred oviposition by female stable flies; The flies' oviposition decisions appear to be guided by bacteria-derived semiochemicals as the bacteria
0.01%
18.0
Serratia marcescens
RISB0009
Phormia regina
Order: Diptera
prompted oviposition by flies; The flies' oviposition decisions appear to be guided by bacteria-derived semiochemicals as the bacteria
0.02%
17.7
Exiguobacterium sp. N4-1P
RISB0007
Phormia regina
Order: Diptera
prompted oviposition by flies; The flies' oviposition decisions appear to be guided by bacteria-derived semiochemicals as the bacteria
0.01%
17.7
Enterococcus faecalis
RISB1411
Bactrocera dorsalis
Order: Diptera
female Bactrocera dorsalis fed Enterococcus faecalis and Klebsiella oxytoca enriched diets lived longer but had lower fecundity
0.08%
17.6
Escherichia coli
RISB0128
Tribolium castaneum
Order: Coleoptera
may produce 4,8-dimethyldecanal (DMD) production that is strongly associated with attraction to females and host pheromone communication
9.31%
17.0
Morganella morganii
RISB0611
Bactrocera dorsalis
Order: Diptera
may hydrolysing nitrogenous waste and providing metabolizable nitrogen for B. dorsalis
0.01%
16.7
Enterococcus faecalis
RISB0095
Bactrocera minax
Order: Diptera
egrade phenols in unripe citrus in B. minax larvae
0.08%
16.1
Lactiplantibacillus plantarum
RISB0674
Drosophila melanogaster
Order: Diptera
could effectively inhibit fungal spore germinations
0.02%
16.0
Serratia marcescens
RISB0096
Bactrocera minax
Order: Diptera
egrade phenols in unripe citrus in B. minax larvae
0.02%
16.0
Bacillus thuringiensis
RISB0820
Simulium tani
Order: Diptera
show resistance to some antibiotics
0.13%
15.8
Paenibacillus sp. 37
RISB2098
Aedes aegypti
Order: Diptera
axenic larvae cannot develop
0.04%
15.6
Acinetobacter sp. ESL0695
RISB2083
Aedes aegypti
Order: Diptera
axenic larvae cannot develop
0.02%
15.6
Chryseobacterium sp. C-71
RISB2092
Aedes aegypti
Order: Diptera
axenic larvae cannot develop
0.02%
15.6
Lactococcus lactis
RISB1167
Bactrocera dorsalis
Order: Diptera
Promote the growth of larvae
0.01%
15.6
Chryseobacterium sp. MEBOG06
RISB2092
Aedes aegypti
Order: Diptera
axenic larvae cannot develop
0.01%
15.6
Bacillus cereus
RISB1872
Aedes aegypti
Order: Diptera
gut microbiome
0.07%
15.4
Staphylococcus hominis
RISB1881
Aedes aegypti
Order: Diptera
gut microbiome
0.01%
15.3
Bacillus cereus
RISB1701
Phlebotomus papatasi
Order: Diptera
None
0.07%
15.1
Buchnera aphidicola
RISB0051
Episyrphus balteatus
Order: Diptera
None
0.04%
15.0
Asaia
RISB0854
Anopheles stephensi
Order: Diptera
Two complete operons encoding cytochrome bo3-type ubiquinol terminal oxidases (cyoABCD-1 and cyoABCD-2) were found in most Asaia genomes, possibly offering alternative terminal oxidases and allowing the flexible transition of respiratory pathways. Genes involved in the production of 2,3-butandiol and inositol have been found in Asaia sp. W12, possibly contributing to biofilm formation and stress tolerance.
0.03%
15.0
Spiroplasma
RISB1796
Drosophila neotestacea
Order: Diptera
when parasitized by the nematode Howardula aoronymphium, Spiroplasma encodes a ribosome-inactivating protein (RIP) related to Shiga-like toxins from enterohemorrhagic Escherichia coli and that Howardula ribosomal RNA (rRNA) is depurinated during Spiroplasma-mediated protection of D. neotestacea
0.03%
15.0
Lactiplantibacillus plantarum
RISB0608
Drosophila melanogaster
Order: Diptera
None
0.02%
15.0
Listeria
RISB2308
Drosophila melanogaster
Order: Diptera
L. monocytogenes infection disrupts host energy metabolism by depleting energy stores (triglycerides and glycogen) and reducing metabolic pathway activity (beta-oxidation and glycolysis). The infection affects antioxidant defense by reducing uric acid levels and alters amino acid metabolism. These metabolic changes are accompanied by melanization, potentially linked to decreased tyrosine levels.
0.02%
15.0
Streptomyces sp. T12
RISB0943
Polybia plebeja
Order: Hymenoptera
this bacterium produces antimicrobial compounds that are active against Hirsutella citriformis, a natural fungal enemy of its host, and the human pathogens Staphylococcus aureus and Candida albicans
5.33%
14.3
Spiroplasma
RISB1926
Anopheles gambiae
Order: Diptera
may have reproductive interactions with their mosquito hosts,either providing an indirect fitness advantage to females by inducing male killing or by directly protecting the host against natural pathogens
0.03%
14.1
Streptomyces sp. T12
RISB2334
Sirex noctilio
Order: Hymenoptera
degrading woody substrates and that such degradation may assist in nutrient acquisition by S. noctilio, thus contributing to its ability to be established in forested habitats worldwide
5.33%
14.0
Spiroplasma
RISB2026
Drosophila hydei
Order: Diptera
Spiroplasma protect their host against parasitoid attack. The Spiroplasma-conferred protection is partial and flies surviving a wasp attack have reduced adult longevity and fecundity
0.03%
13.7
Asaia
RISB0014
Aedes aegypti
Order: Diptera
The bacterium Asaia is considered a highly promising candidate for arboviral control in Aedes mosquitoes.Asaia could play a role in inhibiting CHIKV within Ae. aegypti.
0.03%
13.4
Asaia
RISB2533
Anopheles stephensi
Order: Diptera
Asaia sp. strain effectively lodged in the female gut and salivary glands, sites that are crucial for Plasmodium sp. development and transmission
0.03%
12.9
Streptomyces sp. T12
RISB1134
mud dauber wasp
Order: Hymenoptera
secondary metabolites derived from a Streptomyces sp. displayed significant inhibitory activity against hexokinase II
5.33%
12.7
Shewanella
RISB1924
Anopheles gambiae
Order: Diptera
may be related with mediating adaptation to different ecological niches or in shaping specific adult behaviors including mating
0.02%
12.6
Providencia
RISB1001
Anastrepha obliqua
Order: Diptera
improve the sexual competitiveness of males
0.02%
10.9
Providencia
RISB1574
Bactrocera tau
Order: Diptera
could attract male and female B. tau
0.02%
10.7
Aeromonas
RISB2086
Aedes aegypti
Order: Diptera
axenic larvae cannot develop
0.05%
10.6
Providencia
RISB1168
Bactrocera dorsalis
Order: Diptera
Promote the growth of larvae
0.02%
10.6
Peribacillus
RISB1877
Aedes aegypti
Order: Diptera
gut microbiome
0.02%
10.3
Alcaligenes
RISB1871
Aedes aegypti
Order: Diptera
gut microbiome
0.00%
10.3
Buchnera aphidicola
RISB0236
Acyrthosiphon pisum
Order: Hemiptera
Buchnera the nutritional endosymbiont of A. pisum is located inside of bacteriocytes and requires aspartate from the aphid host, because it cannot make it de novo. Further Buchnera needs aspartate for the biosynthesis of the essential amino acids lysine and threonine, which the aphid and Buchnera require for survival
0.04%
10.0
Pseudomonas sp. CIP-10
RISB1622
Dendroctonus valens
Order: Coleoptera
volatiles from predominant bacteria regulate the consumption sequence of carbon sources d-pinitol and d-glucose in the fungal symbiont Leptographium procerum, and appear to alleviate the antagonistic effect from the fungus against RTB larvae
0.07%
9.9
Pseudomonas sp. MAG733B
RISB1622
Dendroctonus valens
Order: Coleoptera
volatiles from predominant bacteria regulate the consumption sequence of carbon sources d-pinitol and d-glucose in the fungal symbiont Leptographium procerum, and appear to alleviate the antagonistic effect from the fungus against RTB larvae
0.00%
9.8
Buchnera aphidicola
RISB2485
Macrosiphum euphorbiae
Order: Hemiptera
symbiont expression patterns differ between aphid clones with differing levels of virulence, and are influenced by the aphids' host plant. Potentially, symbionts may contribute to differential adaptation of aphids to host plant resistance
0.04%
9.8
Acinetobacter sp. ESL0695
RISB0730
Curculio chinensis
Order: Coleoptera
Acinetobacter sp. in C. chinensis enriched after treating with saponin, and when incubating bacteria with saponin for 72 h, saponin content significantly decreased from 4.054 to 1.867 mg/mL (by 16S rRNA metagenome sequencing and HPLC)
0.02%
9.7
Clostridium sp. AWRP
RISB2301
Pyrrhocoris apterus
Order: Hemiptera
could play an important role for the insect by degrading complex dietary components, providing nutrient supplementation, or detoxifying noxious chemicals (e.g. cyclopropenoic fatty acids or gossypol) in the diet
0.00%
9.2
Pantoea ananatis
RISB1671
Spodoptera frugiperda
Order: Lepidoptera
modulate plant defense, downregulated the activity of the plant defensive proteins polyphenol oxidase and trypsin proteinase inhibitors (trypsin PI) but upregulated peroxidase (POX) activity in tomatoresponses
0.01%
9.2
Mammaliicoccus sciuri
RISB0075
Bombyx mori
Order: Lepidoptera
could produce a secreted chitinolytic lysozyme (termed Msp1) to damage fungal cell walls,completely inhibit the spore germination of fungal entomopathogens Metarhizium robertsii and Beauveria bassiana
0.01%
9.0
Acinetobacter sp. ESL0695
RISB1978
Blattella germanica
Order: Blattodea
gut microbiota contributes to production of VCAs that act as fecal aggregation agents and that cockroaches discriminate among the complex odors that emanate from a diverse microbial community
0.02%
8.8
Pseudomonas sp. CIP-10
RISB2224
Leptinotarsa decemlineata
Order: Coleoptera
Colorado potato beetle (Leptinotarsa decemlineata) larvae exploit bacteria in their oral secretions to suppress antiherbivore defenses in tomato (Solanum lycopersicum)
0.07%
8.4
Salmonella enterica
RISB0413
Melanaphis sacchari
Order: Hemiptera
None
3.07%
8.1
Blattabacterium cuenoti
RISB0133
Panesthiinae
Order: Blattodea
enables hosts to subsist on a nutrient-poor diet; endosymbiont genome erosions are associated with repeated host transitions to an underground life
0.01%
8.0
Rhizobium
RISB0135
Coccinella septempunctata
Order: Coleoptera
be commonly found in plant roots and they all have nitrogen fixation abilities
6.32%
7.9
Enterococcus faecalis
RISB0497
Cryptolestes ferrugineus
Order: Coleoptera
bacteria can degrade malathion, pirimiphos-methyl, and deltamethrin and utilize these insecticides as the carbon source in vitro.
0.08%
7.7
Pantoea ananatis
RISB0515
Laodelphax striatellus
Order: Hemiptera
pathogenic to the host insect, raises the possibility of using the Lstr strain as a biological agent
0.01%
7.0
Rickettsiella
RISB2479
Acyrthosiphon pisum
Order: Hemiptera
changes the insects’ body color from red to green in natural populations, the infection increased amounts of blue-green polycyclic quinones, whereas it had less of an effect on yellow-red carotenoid pigments
2.68%
6.8
Paenibacillus sp. 37
RISB0813
Hypothenemus hampei
Order: Coleoptera
might contribute to caffeine breakdown using the C-9 oxidation pathway
0.04%
6.4
Rickettsiella
RISB2262
Acyrthosiphon pisum
Order: Hemiptera
against this entomopathogen Pandora neoaphidis, reduce mortality and also decrease fungal sporulation on dead aphids which may help protect nearby genetically identical insects
2.68%
6.2
Blattabacterium cuenoti
RISB0518
Cryptocercus punctulatus
Order: Blattodea
collaborative arginine biosynthesis
0.01%
5.7
Rickettsiella
RISB1739
Acyrthosiphon pisum
Order: Hemiptera
in an experiment with a single-injected isolate of Rickettsiella sp. wasps were also attracted to plants fed on by aphids without secondary symbionts
2.68%
5.7
Burkholderia
RISB1172
Lagria villosa
Order: Coleoptera
process a cryptic gene cluster that codes for the biosynthesis of a novel antifungal polyketide with a glutarimide pharmacophore, which led to the discovery of the gladiofungins as previously-overlooked components of the antimicrobial armory of the beetle symbiont
0.58%
5.6
Blattabacterium cuenoti
RISB0093
Blattella germanica
Order: Blattodea
obligate endosymbiont
0.01%
5.4
Exiguobacterium sp. N4-1P
RISB1152
Tenebrio molitor
Order: Coleoptera
degrading plastics
0.01%
5.4
Staphylococcus hominis
RISB1071
Oryctes rhinoceros
Order: Coleoptera
gut microbe
0.01%
5.2
Staphylococcus epidermidis
RISB1070
Oryctes rhinoceros
Order: Coleoptera
gut microbe
0.00%
5.2
Agrobacterium tumefaciens
RISB0650
Melanaphis bambusae
Order: Hemiptera
None
0.16%
5.2
Zymobacter palmae
RISB1324
Vespa mandarinia
Order: Hymenoptera
None
0.09%
5.1
Flavobacterium johnsoniae
RISB0659
Melanaphis bambusae
Order: Hemiptera
None
0.02%
5.0
Candidatus Erwinia haradaeae
RISB1632
Lachninae
Order: Hemiptera
None
0.00%
5.0
Gilliamella
RISB0102
Apis mellifera
Order: Hymenoptera
Gilliamella apicola carries the gene for the desaturase FADS2, which is able to metabolize polyunsaturated fatty acids from pollen and synthesize endocannabinoid, a lipogenic neuroactive substance, thereby modulating reward learning and memory in honeybees.
0.00%
5.0
Burkholderia
RISB1729
Lagria hirta
Order: Coleoptera
the symbionts inhibit the growth of antagonistic fungi on the eggs of the insect host, indicating that the Lagria-associated Burkholderia have evolved from plant pathogenic ancestors into insect defensive mutualists
0.58%
4.9
Treponema
RISB2377
termite
Order: Blattodea
when grown together, two termite-gut Treponema species influence each other's gene expression in a far more comprehensive and nuanced manner than might have been predicted based on the results of previous studies on the respective pure cultures
0.00%
4.9
Burkholderia
RISB0402
Riptortus pedestris
Order: Hemiptera
symbiont colonization induces the development of the midgut crypts via finely regulating the enterocyte cell cycles, enabling it to stably and abundantly colonize the generated spacious crypts of the bean bug host
0.58%
4.8
Rahnella
RISB1623
Dendroctonus valens
Order: Coleoptera
volatiles from predominant bacteria regulate the consumption sequence of carbon sources d-pinitol and d-glucose in the fungal symbiont Leptographium procerum, and appear to alleviate the antagonistic effect from the fungus against RTB larvae
0.01%
4.8
Xanthomonas
RISB0498
Xylocopa appendiculata
Order: Hymenoptera
Xanthomonas strain from Japanese carpenter bee is effective PU-degradable bacterium and is able to use polyacryl-based PU as a nutritional source, as well as other types of PS-PU and PE-PU
0.01%
3.8
Halomonas
RISB1808
Monochamus galloprovincialis
Order: Coleoptera
Have the ability for degradation of cellulose, proteins and starch
2.22%
3.5
Vibrio
RISB1810
Monochamus galloprovincialis
Order: Coleoptera
Have the ability for degradation of cellulose, proteins and starch
1.46%
2.8
Bartonella
RISB1673
Apis mellifera
Order: Hymenoptera
a gut symbiont of insects and that the adaptation to blood-feeding insects facilitated colonization of the mammalian bloodstream
0.02%
2.6
Yersinia
RISB0492
Cimex hemipterus
Order: Hemiptera
the disruption of the abundant Yersinia possibly could be related to the enhanced susceptibility towards the insecticides
0.03%
2.5
Bacteroides
RISB0256
Leptocybe invasa
Order: Hymenoptera
Differences in Male-Killing Rickettsia Bacteria between Lineages of the Invasive Gall-Causing Pest Leptocybe invasa
0.01%
2.3
Halomonas
RISB1374
Bemisia tabaci
Order: Hemiptera
None
2.22%
2.2
Rahnella
RISB1800
Dendroctonus valens
Order: Coleoptera
could alleviate or compromise the antagonistic effects of fungi O. minus and L. procerum on RTB larval growth
0.01%
2.2
Bacteroides
RISB0090
Hyphantria cunea
Order: Lepidoptera
enhance the compatibility of invasive pests to new hosts and enable more rapid adaptation to new habitats.
0.01%
2.1
Rahnella
RISB0741
Dendroctonus ponderosae
Order: Coleoptera
R. aquatilis decreased (−)-α-pinene (38%) and (+)-α-pinene (46%) by 40% and 45% (by GC-MS), respectively
0.01%
2.1
Bacteroides
RISB1183
Oryzaephilus surinamensis
Order: Coleoptera
supplement precursors for the cuticle synthesis and thereby enhance desiccation resistance of its host
0.01%
2.1
Streptococcus
RISB2625
Galleria mellonella
Order: Lepidoptera
suppress bacteria ingested with food by producing bacteriocin and by releasing a lysozyme like enzyme
0.03%
2.1
Corynebacterium
RISB0363
Pagiophloeus tsushimanus
Order: Coleoptera
terpenoid-degrading: the highest degradation rates of D-camphor, linalool, and eucalyptol
0.26%
2.0
Xanthomonas
RISB0217
Xylocopa appendiculata
Order: Hymenoptera
strains biodegraded polyethylene terephthalate PET powder, broke it into its degradation products
0.01%
2.0
Corynebacterium
RISB0531
Helicoverpa armigera
Order: Lepidoptera
Corynebacterium sp. 2-TD, mediates the toxicity of the 2-tridecanone to H. armigera
0.26%
1.9
Nocardioides
RISB1914
Hyles euphorbiae
Order: Lepidoptera
able to degrade alkaloids and/or latex
1.01%
1.8
Nostoc
RISB0812
Hypothenemus hampei
Order: Coleoptera
might contribute to caffeine breakdown using the C-18 oxidation pathway
0.26%
1.7
Streptococcus
RISB2624
Reticulitermes flavipes
Order: Blattodea
can be broken down into substances such as carbon dioxide, ammonia and acetic acid
0.03%
1.7
Leuconostoc
RISB0812
Hypothenemus hampei
Order: Coleoptera
might contribute to caffeine breakdown using the C-18 oxidation pathway
0.01%
1.4
Streptococcus
RISB2604
Homona magnanima
Order: Lepidoptera
influence the growth of Bacillus thuringiensis in the larvae
0.03%
1.2
Paraclostridium
RISB0028
Sesamia inferens
Order: Lepidoptera
degrade Chlorpyrifos and Chlorantraniliprole in vitro
0.00%
1.1
Corynebacterium
RISB2360
Bombyx mori
Order: Lepidoptera
producing lipase in a gut environment
0.26%
1.0
Lysinibacillus
RISB1416
Psammotermes hypostoma
Order: Blattodea
isolates showed significant cellulolytic activity
0.02%
1.0
Brevibacterium
RISB0464
Acrida cinerea
Order: Orthoptera
correlated with the hemicellulose digestibility
0.01%
1.0
Aeromonas
RISB2456
Bombyx mori
Order: Lepidoptera
able to utilize the CMcellulose and xylan
0.05%
0.9
Gordonia
RISB1912
Hyles euphorbiae
Order: Lepidoptera
able to degrade alkaloids and/or latex
0.04%
0.8
Brevibacterium
RISB2359
Bombyx mori
Order: Lepidoptera
producing lipase in a gut environment
0.01%
0.8
Mycobacterium
RISB1156
Nicrophorus concolor
Order: Coleoptera
produces Antimicrobial compounds
0.08%
0.7
Aeromonas
RISB1145
Tenebrio molitor
Order: Coleoptera
degrading plastics
0.05%
0.4
Priestia
RISB0839
Helicoverpa armigera
Order: Lepidoptera
producing amylase
0.03%
0.4
Gilliamella
RISB0620
Spodoptera frugiperda
Order: Lepidoptera
degrade amygdalin
0.00%
0.3
Lysinibacillus
RISB1066
Oryctes rhinoceros
Order: Coleoptera
gut microbe
0.02%
0.2
Ralstonia
RISB0243
Spodoptera frugiperda
Order: Lepidoptera
None
0.19%
0.2
Yersinia
RISB0407
Anaphes nitens
Order: Hymenoptera
None
0.03%
0.0
Cupriavidus
RISB0694
Alydus tomentosus
Order: Hemiptera
None
0.03%
0.0
Neisseria
RISB0512
Plutella xylostella
Order: Lepidoptera
None
0.03%
0.0
Micromonospora
RISB2033
Palomena viridissima
Order: Hemiptera
None
0.03%
0.0
Legionella
RISB1687
Polyplax serrata
Order: Phthiraptera
None
0.02%
0.0
Brevibacterium
RISB0897
Myzus persicae
Order: Hemiptera
None
0.01%
0.0
Helicobacter
RISB0662
Melanaphis bambusae
Order: Hemiptera
None
0.01%
0.0
Gilliamella
RISB1945
Apis cerana
Order: Hymenoptera
None
0.00%
0.0
Treponema
RISB0169
Reticulitermes flaviceps
Order: Blattodea
None
0.00%
0.0

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Taxonomic Analysis Files

Kraken Report

Detailed taxonomic classification

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Krona HTML

Interactive taxonomic visualization

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Bracken Results

Species abundance estimation

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Assembly & Gene Prediction

Assembled Contigs

MEGAHIT assembly results

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Predicted Genes

Gene sequences (FASTA)

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Gene Annotation

GFF format annotation

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Genome Binning

MetaBAT2 Bins

Compressed genome bins

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Bin Information

Quality metrics and statistics

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR24762878
3.1 GB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

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