SRR24762863 - Culex

Basic Information

Run: SRR24762863

Assay Type: WGS

Bioproject: PRJNA918574

Biosample: SAMN35436890

Bytes: 3025220772

Center Name: EVANDRO CHAGAS INSTITUTE

Sequencing Information

Instrument: NextSeq 500

Library Layout: PAIRED

Library Selection: cDNA

Platform: ILLUMINA

Geographic Information

Country: Brazil

Continent: South America

Location Name: Brazil: Curionopolis\, Para State

Latitude/Longitude: 5.949390 S 49.658962 W

Sample Information

Host: Culex

Isolation: Village of Serra Pelada

Biosample Model: Metagenome or environmental

Collection Date: 2019-02

Taxonomic Classification

Potential Symbionts

Based on our current records database, this section aims to identify potential functional symbionts in this metagenome sample, with scoring based on:

  • Relative abundance in sample
  • Species-level matches with known symbionts
  • Host insect order matches
  • Functional record completeness

Note: Showing top 3 highest scoring records for each species/genus

Symbiont Name Record Host Species Function Abundance
Score
Enterobacter hormaechei
RISB1331
Zeugodacus cucurbitae
Order: Diptera
None
25.42%
40.4
Stenotrophomonas maltophilia
RISB1227
Delia antiqua
Order: Diptera
six bacteria protect larvae from infection with the entomopathogen Beauveria bassiana through symbiotic bacterium-derived organic acids
8.98%
26.7
Stenotrophomonas maltophilia
RISB1141
Hermetia illucens
Order: Diptera
enhance the insect growth performance when reared on an unbalanced nutritionally poor diet
8.98%
25.8
Stenotrophomonas maltophilia
RISB1401
Delia antiqua
Order: Diptera
suppressed Beauveria bassiana conidia germination and hyphal growth
8.98%
25.3
Enterobacter sp. T2
RISB0893
Bactrocera dorsalis
Order: Diptera
be beneficial, with some quality control indices, such as adult size, pupal weight, survival rate under stress and nutritionally rich conditions, and mating competitiveness, being significantly increased, while slight nonsignificant increases in emergence rate and flight ability were observed
0.34%
20.3
Lactococcus lactis
RISB0131
Ceratitis capitata
Order: Diptera
The intestinal microbiota structure was significantly influenced by the probiotic treatment while still maintaining a stable core dominant community of Enterobacteriacea. The  colony with these microbiome had the most improved potential functions in terms of gut microbes as well as the carbohydrates active enzymes most improved potential functions.
0.06%
20.1
Wolbachia pipientis
RISB0766
Aedes fluviatilis
Order: Diptera
The presence of Wolbachia pipientis improves energy performance in A. fluviatilis cells; it affects the regulation of key energy sources such as lipids, proteins, and carbohydrates, making the distribution of actin more peripheral and with extensions that come into contact with neighboring cells.
0.02%
20.0
Enterobacter sp. T2
RISB1338
Ceratitis capitata
Order: Diptera
Enterobacter sp. AA26 dry biomass can fully replace the brewer’s yeast as a protein source in medfly larval diet without any effect on the productivity and the biological quality of reared medfly of VIENNA 8 GSS
0.34%
19.6
Serratia marcescens
RISB1291
Aedes aegypti
Order: Diptera
facilitates arboviral infection through a secreted protein named SmEnhancin, which digests membrane-bound mucins on the mosquito gut epithelia, thereby enhancing viral dissemination.
0.07%
18.7
Paenibacillus sp. SYP-B4298
RISB0774
Delia antiqua
Order: Diptera
showed significant contact inhibition activity against fungal entomopathogen Fusarium moniliforme, Botryosphaeria dothidea and both Fusarium oxysporum respectively
0.05%
18.3
Morganella morganii
RISB0772
Delia antiqua
Order: Diptera
showed significant volatile inhibition activity against fungal entomopathogen Fusarium moniliforme, Botryosphaeria dothidea and both Fusarium oxysporum respectively
0.01%
18.3
Lactococcus lactis
RISB0113
Bactrocera dorsalis
Order: Diptera
increase the resistance of B. dorsalis to β-cypermethrin by regulating cytochrome P450 (P450) enzymes and α-glutathione S-transferase (GST) activities
0.06%
18.1
Morganella morganii
RISB0008
Phormia regina
Order: Diptera
deterred oviposition by female stable flies; The flies' oviposition decisions appear to be guided by bacteria-derived semiochemicals as the bacteria
0.01%
18.0
Citrobacter freundii
RISB1221
Delia antiqua
Order: Diptera
six bacteria protect larvae from infection with the entomopathogen Beauveria bassiana through symbiotic bacterium-derived organic acids
0.06%
17.8
Serratia marcescens
RISB0009
Phormia regina
Order: Diptera
prompted oviposition by flies; The flies' oviposition decisions appear to be guided by bacteria-derived semiochemicals as the bacteria
0.07%
17.8
Enterococcus faecalis
RISB1411
Bactrocera dorsalis
Order: Diptera
female Bactrocera dorsalis fed Enterococcus faecalis and Klebsiella oxytoca enriched diets lived longer but had lower fecundity
0.04%
17.6
Wolbachia pipientis
RISB1515
Drosophila melanogaster
Order: Diptera
increases the recombination rate observed across two genomic intervals and increases the efficacy of natural selection in hosts
0.02%
17.6
Wolbachia pipientis
RISB1354
Drosophila melanogaster
Order: Diptera
Wolbachia influence octopamine metabolism in the Drosophila females, which is by the symbiont genotype
0.02%
17.1
Morganella morganii
RISB0611
Bactrocera dorsalis
Order: Diptera
may hydrolysing nitrogenous waste and providing metabolizable nitrogen for B. dorsalis
0.01%
16.7
Citrobacter freundii
RISB1396
Delia antiqua
Order: Diptera
suppressed Beauveria bassiana conidia germination and hyphal growth
0.06%
16.4
Bacillus thuringiensis
RISB0820
Simulium tani
Order: Diptera
show resistance to some antibiotics
0.38%
16.1
Serratia marcescens
RISB0096
Bactrocera minax
Order: Diptera
egrade phenols in unripe citrus in B. minax larvae
0.07%
16.1
Klebsiella pneumoniae
RISB1771
Muscidae
Order: Diptera
None
1.06%
16.1
Enterococcus faecalis
RISB0095
Bactrocera minax
Order: Diptera
egrade phenols in unripe citrus in B. minax larvae
0.04%
16.0
Lactiplantibacillus plantarum
RISB0674
Drosophila melanogaster
Order: Diptera
could effectively inhibit fungal spore germinations
0.02%
16.0
Escherichia coli
RISB1769
Calliphoridae
Order: Diptera
None
0.93%
15.9
Providencia rettgeri
RISB1001
Anastrepha obliqua
Order: Diptera
improve the sexual competitiveness of males
0.04%
15.9
Lactococcus lactis
RISB1167
Bactrocera dorsalis
Order: Diptera
Promote the growth of larvae
0.06%
15.6
Citrobacter freundii
RISB1162
Bactrocera dorsalis
Order: Diptera
Promote the growth of larvae
0.06%
15.6
Paenibacillus sp. SYP-B4298
RISB2098
Aedes aegypti
Order: Diptera
axenic larvae cannot develop
0.05%
15.6
Providencia rettgeri
RISB1169
Bactrocera dorsalis
Order: Diptera
Promote the growth of larvae
0.04%
15.6
Microbacterium sp. AB
RISB2095
Aedes aegypti
Order: Diptera
axenic larvae cannot develop
0.02%
15.6
Providencia alcalifaciens
RISB1168
Bactrocera dorsalis
Order: Diptera
Promote the growth of larvae
0.01%
15.6
Bacillus cereus
RISB1872
Aedes aegypti
Order: Diptera
gut microbiome
0.19%
15.5
Bacillus cereus
RISB1701
Phlebotomus papatasi
Order: Diptera
None
0.19%
15.2
Buchnera aphidicola
RISB0051
Episyrphus balteatus
Order: Diptera
None
0.05%
15.1
Lactiplantibacillus plantarum
RISB0608
Drosophila melanogaster
Order: Diptera
None
0.02%
15.0
Lactobacillus
RISB1866
Drosophila melanogaster
Order: Diptera
The bacterial cells may thus be able to ameliorate the pH of the acidic region, by the release of weak bases.Additionally, the bacteria have a complex relationship with physiological processes which may affect ionic homeostasis in the gut, such as nutrition and immune function
0.02%
15.0
Sphingobacterium
RISB1226
Delia antiqua
Order: Diptera
six bacteria protect larvae from infection with the entomopathogen Beauveria bassiana through symbiotic bacterium-derived organic acids
0.02%
12.7
Exiguobacterium
RISB0007
Phormia regina
Order: Diptera
prompted oviposition by flies; The flies' oviposition decisions appear to be guided by bacteria-derived semiochemicals as the bacteria
0.02%
12.7
Shewanella
RISB1924
Anopheles gambiae
Order: Diptera
may be related with mediating adaptation to different ecological niches or in shaping specific adult behaviors including mating
0.03%
12.6
Salmonella enterica
RISB0413
Melanaphis sacchari
Order: Hemiptera
None
7.32%
12.3
Lactobacillus
RISB0185
Drosophila melanogaster
Order: Diptera
enhancing the brain levels of tyrosine decarboxylase 2 (Tdc2), which is an enzyme that synthesizes octopamine (OA)
0.02%
12.3
Streptomyces sp. T12
RISB0943
Polybia plebeja
Order: Hymenoptera
this bacterium produces antimicrobial compounds that are active against Hirsutella citriformis, a natural fungal enemy of its host, and the human pathogens Staphylococcus aureus and Candida albicans
2.82%
11.8
Streptomyces sp. T12
RISB2334
Sirex noctilio
Order: Hymenoptera
degrading woody substrates and that such degradation may assist in nutrient acquisition by S. noctilio, thus contributing to its ability to be established in forested habitats worldwide
2.82%
11.5
Lactobacillus
RISB1714
Drosophila melanogaster
Order: Diptera
It has the potential to reduce IMI-induced susceptibility to infection.
0.02%
11.4
Sphingobacterium
RISB1400
Delia antiqua
Order: Diptera
suppressed Beauveria bassiana conidia germination and hyphal growth
0.02%
11.4
Klebsiella pneumoniae
RISB2185
Scirpophaga incertulas
Order: Lepidoptera
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases that are secreted by gut microbiota to digest the structural and recalcitrant lignocellulosic residues in their foods.
1.06%
11.1
Chryseobacterium
RISB2092
Aedes aegypti
Order: Diptera
axenic larvae cannot develop
0.05%
10.6
Aeromonas
RISB2086
Aedes aegypti
Order: Diptera
axenic larvae cannot develop
0.03%
10.6
Chryseobacterium
RISB1874
Aedes aegypti
Order: Diptera
gut microbiome
0.05%
10.3
Alcaligenes
RISB1871
Aedes aegypti
Order: Diptera
gut microbiome
0.03%
10.3
Peribacillus
RISB1877
Aedes aegypti
Order: Diptera
gut microbiome
0.03%
10.3
Escherichia coli
RISB1339
Manduca sexta
Order: Lepidoptera
modulate immunity-related gene expression in the infected F0 larvae, and also in their offspring, triggered immune responses in the infected host associated with shifts in both DNA methylation and histone acetylation
0.93%
10.3
Pseudomonas sp. CIP-10
RISB1622
Dendroctonus valens
Order: Coleoptera
volatiles from predominant bacteria regulate the consumption sequence of carbon sources d-pinitol and d-glucose in the fungal symbiont Leptographium procerum, and appear to alleviate the antagonistic effect from the fungus against RTB larvae
0.36%
10.2
Streptomyces sp. T12
RISB1134
mud dauber wasp
Order: Hymenoptera
secondary metabolites derived from a Streptomyces sp. displayed significant inhibitory activity against hexokinase II
2.82%
10.2
Paenibacillus polymyxa
RISB2195
Termitidae
Order: Blattodea
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases that are secreted by gut microbiota to digest the structural and recalcitrant lignocellulosic residues in their foods.
0.05%
10.1
Buchnera aphidicola
RISB0236
Acyrthosiphon pisum
Order: Hemiptera
Buchnera the nutritional endosymbiont of A. pisum is located inside of bacteriocytes and requires aspartate from the aphid host, because it cannot make it de novo. Further Buchnera needs aspartate for the biosynthesis of the essential amino acids lysine and threonine, which the aphid and Buchnera require for survival
0.05%
10.1
Chryseobacterium
RISB0015
Aedes aegypti
Order: Diptera
None
0.05%
10.1
Pectobacterium
RISB1772
Muscidae
Order: Diptera
None
0.04%
10.0
Pantoea agglomerans
RISB2197
Termitidae
Order: Blattodea
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases that are secreted by gut microbiota to digest the structural and recalcitrant lignocellulosic residues in their foods.
0.03%
10.0
Variovorax
RISB1712
Phlebotomus papatasi
Order: Diptera
None
0.01%
10.0
Pseudomonas sp. URMO17WK12:I11
RISB1622
Dendroctonus valens
Order: Coleoptera
volatiles from predominant bacteria regulate the consumption sequence of carbon sources d-pinitol and d-glucose in the fungal symbiont Leptographium procerum, and appear to alleviate the antagonistic effect from the fungus against RTB larvae
0.03%
9.9
Buchnera aphidicola
RISB2485
Macrosiphum euphorbiae
Order: Hemiptera
symbiont expression patterns differ between aphid clones with differing levels of virulence, and are influenced by the aphids' host plant. Potentially, symbionts may contribute to differential adaptation of aphids to host plant resistance
0.05%
9.8
Clostridium sp. JS66
RISB2301
Pyrrhocoris apterus
Order: Hemiptera
could play an important role for the insect by degrading complex dietary components, providing nutrient supplementation, or detoxifying noxious chemicals (e.g. cyclopropenoic fatty acids or gossypol) in the diet
0.01%
9.2
Mammaliicoccus sciuri
RISB0075
Bombyx mori
Order: Lepidoptera
could produce a secreted chitinolytic lysozyme (termed Msp1) to damage fungal cell walls,completely inhibit the spore germination of fungal entomopathogens Metarhizium robertsii and Beauveria bassiana
0.01%
9.0
Staphylococcus xylosus
RISB2497
Anticarsia gemmatalis
Order: Lepidoptera
allow the adaptation of this insect to plants rich in protease inhibitors, minimizing the potentially harmful consequences of protease inhibitors from some of this insect host plants, such as soybean
0.01%
9.0
Acinetobacter pittii
RISB1977
Blattella germanica
Order: Blattodea
gut microbiota contributes to production of VCAs that act as fecal aggregation agents and that cockroaches discriminate among the complex odors that emanate from a diverse microbial community
0.02%
8.8
Pseudomonas sp. CIP-10
RISB2224
Leptinotarsa decemlineata
Order: Coleoptera
Colorado potato beetle (Leptinotarsa decemlineata) larvae exploit bacteria in their oral secretions to suppress antiherbivore defenses in tomato (Solanum lycopersicum)
0.36%
8.7
Escherichia coli
RISB0128
Tribolium castaneum
Order: Coleoptera
may produce 4,8-dimethyldecanal (DMD) production that is strongly associated with attraction to females and host pheromone communication
0.93%
8.7
Rickettsiella
RISB2479
Acyrthosiphon pisum
Order: Hemiptera
changes the insects’ body color from red to green in natural populations, the infection increased amounts of blue-green polycyclic quinones, whereas it had less of an effect on yellow-red carotenoid pigments
4.15%
8.3
Spiroplasma ixodetis
RISB0842
Dactylopius coccus
Order: Hemiptera
use the T4SS to interact with the Dactylopius cells, which show a strong interaction and molecular signaling in the symbiosis
0.63%
8.1
Blattabacterium cuenoti
RISB0133
Panesthiinae
Order: Blattodea
enables hosts to subsist on a nutrient-poor diet; endosymbiont genome erosions are associated with repeated host transitions to an underground life
0.03%
8.0
Proteus vulgaris
RISB0001
Leptinotarsa decemlineata
Order: Coleoptera
produces toxic hydrogen cyanide (HCN) and a mandelonitrile-producing cyanoglucoside, amygdalin, which protect the insect from predation
0.02%
7.7
Rickettsiella
RISB2262
Acyrthosiphon pisum
Order: Hemiptera
against this entomopathogen Pandora neoaphidis, reduce mortality and also decrease fungal sporulation on dead aphids which may help protect nearby genetically identical insects
4.15%
7.7
Enterococcus faecalis
RISB0497
Cryptolestes ferrugineus
Order: Coleoptera
bacteria can degrade malathion, pirimiphos-methyl, and deltamethrin and utilize these insecticides as the carbon source in vitro.
0.04%
7.6
Rickettsiella
RISB1739
Acyrthosiphon pisum
Order: Hemiptera
in an experiment with a single-injected isolate of Rickettsiella sp. wasps were also attracted to plants fed on by aphids without secondary symbionts
4.15%
7.1
Pantoea agglomerans
RISB2579
Schistocerca gregaria
Order: Orthoptera
produces an antifungal and antibacterial molecule serving as antimicrobial defense against gut pathogens
0.03%
7.1
Klebsiella pneumoniae
RISB2459
Bombyx mori
Order: Lepidoptera
degradation of cellulose, xylan, pectin and starch
1.06%
7.1
Staphylococcus xylosus
RISB2247
Anticarsia gemmatalis
Order: Lepidoptera
mitigation of the negative effects of proteinase inhibitors produced by the host plant
0.01%
6.7
Rhizobium
RISB0135
Coccinella septempunctata
Order: Coleoptera
be commonly found in plant roots and they all have nitrogen fixation abilities
5.01%
6.6
Staphylococcus xylosus
RISB2246
Anticarsia gemmatalis
Order: Lepidoptera
Against plant-derived protease inhibitor; pest control
0.01%
6.1
Proteus vulgaris
RISB2460
Bombyx mori
Order: Lepidoptera
degradation of cellulose, xylan, pectin and starch
0.02%
6.0
Lysinibacillus fusiformis
RISB1417
Psammotermes hypostoma
Order: Blattodea
isolates showed significant cellulolytic activity
0.02%
6.0
Pantoea agglomerans
RISB0379
Frankliniella occidentalis
Order: Thysanoptera
gut symbionts are required for their development
0.03%
6.0
Blattabacterium cuenoti
RISB0518
Cryptocercus punctulatus
Order: Blattodea
collaborative arginine biosynthesis
0.03%
5.7
Blattabacterium cuenoti
RISB0093
Blattella germanica
Order: Blattodea
obligate endosymbiont
0.03%
5.5
Lysinibacillus fusiformis
RISB1066
Oryctes rhinoceros
Order: Coleoptera
gut microbe
0.02%
5.2
Agrobacterium tumefaciens
RISB0650
Melanaphis bambusae
Order: Hemiptera
None
0.19%
5.2
Flavobacterium johnsoniae
RISB0659
Melanaphis bambusae
Order: Hemiptera
None
0.06%
5.1
Burkholderia
RISB1172
Lagria villosa
Order: Coleoptera
process a cryptic gene cluster that codes for the biosynthesis of a novel antifungal polyketide with a glutarimide pharmacophore, which led to the discovery of the gladiofungins as previously-overlooked components of the antimicrobial armory of the beetle symbiont
0.06%
5.1
Candidatus Erwinia haradaeae
RISB1632
Lachninae
Order: Hemiptera
None
0.01%
5.0
Treponema
RISB2377
termite
Order: Blattodea
when grown together, two termite-gut Treponema species influence each other's gene expression in a far more comprehensive and nuanced manner than might have been predicted based on the results of previous studies on the respective pure cultures
0.07%
5.0
Halomonas
RISB1808
Monochamus galloprovincialis
Order: Coleoptera
Have the ability for degradation of cellulose, proteins and starch
3.21%
4.5
Burkholderia
RISB1729
Lagria hirta
Order: Coleoptera
the symbionts inhibit the growth of antagonistic fungi on the eggs of the insect host, indicating that the Lagria-associated Burkholderia have evolved from plant pathogenic ancestors into insect defensive mutualists
0.06%
4.4
Burkholderia
RISB0402
Riptortus pedestris
Order: Hemiptera
symbiont colonization induces the development of the midgut crypts via finely regulating the enterocyte cell cycles, enabling it to stably and abundantly colonize the generated spacious crypts of the bean bug host
0.06%
4.3
Pectobacterium
RISB1889
Pseudococcus longispinus
Order: Hemiptera
a nested symbiotic arrangement, where one bacterium lives inside another bacterium,occurred in building the mosaic metabolic pathways seen in mitochondria and plastids
0.04%
3.4
Vibrio
RISB1810
Monochamus galloprovincialis
Order: Coleoptera
Have the ability for degradation of cellulose, proteins and starch
2.06%
3.4
Sphingobacterium
RISB2227
Leptinotarsa decemlineata
Order: Coleoptera
Colorado potato beetle (Leptinotarsa decemlineata) larvae exploit bacteria in their oral secretions to suppress antiherbivore defenses in tomato (Solanum lycopersicum)
0.02%
3.4
Halomonas
RISB1374
Bemisia tabaci
Order: Hemiptera
None
3.21%
3.2
Bartonella
RISB1673
Apis mellifera
Order: Hymenoptera
a gut symbiont of insects and that the adaptation to blood-feeding insects facilitated colonization of the mammalian bloodstream
0.01%
2.6
Bacteroides
RISB0256
Leptocybe invasa
Order: Hymenoptera
Differences in Male-Killing Rickettsia Bacteria between Lineages of the Invasive Gall-Causing Pest Leptocybe invasa
0.06%
2.4
Bacteroides
RISB0090
Hyphantria cunea
Order: Lepidoptera
enhance the compatibility of invasive pests to new hosts and enable more rapid adaptation to new habitats.
0.06%
2.2
Bacteroides
RISB1183
Oryzaephilus surinamensis
Order: Coleoptera
supplement precursors for the cuticle synthesis and thereby enhance desiccation resistance of its host
0.06%
2.1
Streptococcus
RISB2625
Galleria mellonella
Order: Lepidoptera
suppress bacteria ingested with food by producing bacteriocin and by releasing a lysozyme like enzyme
0.05%
2.1
Delftia
RISB0083
Osmia cornifrons
Order: Hymenoptera
be known to exhibit antibiotic activity, suggesting their potential protective role against pathogens
0.03%
2.1
Corynebacterium
RISB0363
Pagiophloeus tsushimanus
Order: Coleoptera
terpenoid-degrading: the highest degradation rates of D-camphor, linalool, and eucalyptol
0.02%
1.8
Streptococcus
RISB2624
Reticulitermes flavipes
Order: Blattodea
can be broken down into substances such as carbon dioxide, ammonia and acetic acid
0.05%
1.7
Corynebacterium
RISB0531
Helicoverpa armigera
Order: Lepidoptera
Corynebacterium sp. 2-TD, mediates the toxicity of the 2-tridecanone to H. armigera
0.02%
1.7
Nostoc
RISB0812
Hypothenemus hampei
Order: Coleoptera
might contribute to caffeine breakdown using the C-18 oxidation pathway
0.06%
1.5
Delftia
RISB0806
Hypothenemus hampei
Order: Coleoptera
might contribute to caffeine breakdown using the C-19 oxidation pathway
0.03%
1.5
Variovorax
RISB2153
Osmia bicornis
Order: Hymenoptera
may be essential to support Osmia larvae in their nutrient uptake
0.01%
1.3
Streptococcus
RISB2604
Homona magnanima
Order: Lepidoptera
influence the growth of Bacillus thuringiensis in the larvae
0.05%
1.3
Delftia
RISB1754
Spodoptera frugiperda
Order: Lepidoptera
may influence the metabolization of pesticides in insects
0.03%
1.2
Pectobacterium
RISB0798
Pseudoregma bambucicola
Order: Hemiptera
may help P. bambucicola feed on the stalks of bamboo
0.04%
1.1
Paraclostridium
RISB0028
Sesamia inferens
Order: Lepidoptera
degrade Chlorpyrifos and Chlorantraniliprole in vitro
0.02%
1.1
Exiguobacterium
RISB0582
Aleurodicus rugioperculatus
Order: Hemiptera
may indirectly affect whitefly oviposition
0.02%
0.9
Aeromonas
RISB2456
Bombyx mori
Order: Lepidoptera
able to utilize the CMcellulose and xylan
0.03%
0.9
Corynebacterium
RISB2360
Bombyx mori
Order: Lepidoptera
producing lipase in a gut environment
0.02%
0.8
Priestia
RISB0839
Helicoverpa armigera
Order: Lepidoptera
producing amylase
0.06%
0.4
Aeromonas
RISB1145
Tenebrio molitor
Order: Coleoptera
degrading plastics
0.03%
0.4
Exiguobacterium
RISB1152
Tenebrio molitor
Order: Coleoptera
degrading plastics
0.02%
0.4
Ralstonia
RISB0243
Spodoptera frugiperda
Order: Lepidoptera
None
0.17%
0.2
Cupriavidus
RISB0694
Alydus tomentosus
Order: Hemiptera
None
0.09%
0.1
Treponema
RISB0169
Reticulitermes flaviceps
Order: Blattodea
None
0.07%
0.1
Helicobacter
RISB0662
Melanaphis bambusae
Order: Hemiptera
None
0.03%
0.0
Legionella
RISB1687
Polyplax serrata
Order: Phthiraptera
None
0.02%
0.0

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Taxonomic Analysis Files

Kraken Report

Detailed taxonomic classification

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Krona HTML

Interactive taxonomic visualization

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Bracken Results

Species abundance estimation

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Assembly & Gene Prediction

Assembled Contigs

MEGAHIT assembly results

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Predicted Genes

Gene sequences (FASTA)

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Gene Annotation

GFF format annotation

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Genome Binning

MetaBAT2 Bins

Compressed genome bins

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Bin Information

Quality metrics and statistics

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR24762863
2.8 GB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

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