SRR24540932 - Musca domestica

Basic Information

Run: SRR24540932

Assay Type: WGS

Bioproject: PRJNA948024

Biosample: SAMN33900256

Bytes: 1725729729

Center Name: USDA

Sequencing Information

Instrument: HiSeq X Ten

Library Layout: PAIRED

Library Selection: RANDOM

Platform: ILLUMINA

Geographic Information

Country: USA

Continent: North America

Location Name: USA:TEXAS

Latitude/Longitude: not collected

Sample Information

Host: Musca domestica

Isolation: Dairy Barns

Biosample Model: Metagenome or environmental

Collection Date: 2018-06

Taxonomic Classification

Potential Symbionts

Based on our current records database, this section aims to identify potential functional symbionts in this metagenome sample, with scoring based on:

  • Relative abundance in sample
  • Species-level matches with known symbionts
  • Host insect order matches
  • Functional record completeness

Note: Showing top 3 highest scoring records for each species/genus

Symbiont Name Record Host Species Function Abundance
Score
Klebsiella oxytoca
RISB1139
Musca domestica
Order: Diptera
It is associated to newly laid housefly eggs, where it is deposited by the female, and has a role in oviposition as well as protection against potential pathogens
0.14%
38.4
Ochrobactrum
RISB1140
Musca domestica
Order: Diptera
None
0.01%
30.0
Providencia rettgeri
RISB1001
Anastrepha obliqua
Order: Diptera
improve the sexual competitiveness of males
5.69%
21.6
Providencia rettgeri
RISB1169
Bactrocera dorsalis
Order: Diptera
Promote the growth of larvae
5.69%
21.3
Escherichia coli
RISB1769
Calliphoridae
Order: Diptera
None
5.41%
20.4
Enterobacter sp. T2
RISB0893
Bactrocera dorsalis
Order: Diptera
be beneficial, with some quality control indices, such as adult size, pupal weight, survival rate under stress and nutritionally rich conditions, and mating competitiveness, being significantly increased, while slight nonsignificant increases in emergence rate and flight ability were observed
0.37%
20.4
Klebsiella pneumoniae
RISB1771
Muscidae
Order: Diptera
None
5.26%
20.3
Klebsiella oxytoca
RISB0130
Ceratitis capitata
Order: Diptera
The intestinal microbiota structure was significantly influenced by the probiotic treatment while still maintaining a stable core dominant community of Enterobacteriacea. The  colony with these microbiome had the most improved potential functions in terms of gut microbes as well as the carbohydrates active enzymes most improved potential functions.
0.14%
20.1
Lactococcus lactis
RISB0131
Ceratitis capitata
Order: Diptera
The intestinal microbiota structure was significantly influenced by the probiotic treatment while still maintaining a stable core dominant community of Enterobacteriacea. The  colony with these microbiome had the most improved potential functions in terms of gut microbes as well as the carbohydrates active enzymes most improved potential functions.
0.03%
20.0
Enterobacter sp. RHBSTW-00994
RISB0893
Bactrocera dorsalis
Order: Diptera
be beneficial, with some quality control indices, such as adult size, pupal weight, survival rate under stress and nutritionally rich conditions, and mating competitiveness, being significantly increased, while slight nonsignificant increases in emergence rate and flight ability were observed
0.01%
20.0
Enterobacter sp. BIDMC 29
RISB0893
Bactrocera dorsalis
Order: Diptera
be beneficial, with some quality control indices, such as adult size, pupal weight, survival rate under stress and nutritionally rich conditions, and mating competitiveness, being significantly increased, while slight nonsignificant increases in emergence rate and flight ability were observed
0.00%
20.0
Listeria monocytogenes
RISB2308
Drosophila melanogaster
Order: Diptera
L. monocytogenes infection disrupts host energy metabolism by depleting energy stores (triglycerides and glycogen) and reducing metabolic pathway activity (beta-oxidation and glycolysis). The infection affects antioxidant defense by reducing uric acid levels and alters amino acid metabolism. These metabolic changes are accompanied by melanization, potentially linked to decreased tyrosine levels.
0.00%
20.0
Citrobacter freundii
RISB1221
Delia antiqua
Order: Diptera
six bacteria protect larvae from infection with the entomopathogen Beauveria bassiana through symbiotic bacterium-derived organic acids
1.15%
18.9
Citrobacter sp. RHBSTW-00127
RISB1503
Bactrocera dorsalis
Order: Diptera
Pesticide-degrading bacteria were frequently detected from pesticide-resistant insects. Susceptible insects became resistant after inoculation of the pesticide-degrading symbiont
0.28%
18.8
Morganella morganii
RISB0772
Delia antiqua
Order: Diptera
showed significant volatile inhibition activity against fungal entomopathogen Fusarium moniliforme, Botryosphaeria dothidea and both Fusarium oxysporum respectively
0.54%
18.8
Serratia marcescens
RISB1291
Aedes aegypti
Order: Diptera
facilitates arboviral infection through a secreted protein named SmEnhancin, which digests membrane-bound mucins on the mosquito gut epithelia, thereby enhancing viral dissemination.
0.11%
18.8
Citrobacter sp. 172116965
RISB1503
Bactrocera dorsalis
Order: Diptera
Pesticide-degrading bacteria were frequently detected from pesticide-resistant insects. Susceptible insects became resistant after inoculation of the pesticide-degrading symbiont
0.08%
18.6
Morganella morganii
RISB0008
Phormia regina
Order: Diptera
deterred oviposition by female stable flies; The flies' oviposition decisions appear to be guided by bacteria-derived semiochemicals as the bacteria
0.54%
18.5
Arthrobacter sp. YC-RL1
RISB0769
Delia antiqua
Order: Diptera
showed significant volatile inhibition activity against fungal entomopathogen Fusarium moniliforme, Botryosphaeria dothidea and both Fusarium oxysporum respectively
0.01%
18.3
Arthrobacter sp. NEB 688
RISB0769
Delia antiqua
Order: Diptera
showed significant volatile inhibition activity against fungal entomopathogen Fusarium moniliforme, Botryosphaeria dothidea and both Fusarium oxysporum respectively
0.00%
18.3
Leucobacter aridicollis
RISB0771
Delia antiqua
Order: Diptera
showed significant contact inhibition activity against fungal entomopathogen Fusarium moniliforme, Botryosphaeria dothidea and both Fusarium oxysporum respectively
0.01%
18.3
Paenibacillus sp. FSL K6-2441
RISB0774
Delia antiqua
Order: Diptera
showed significant contact inhibition activity against fungal entomopathogen Fusarium moniliforme, Botryosphaeria dothidea and both Fusarium oxysporum respectively
0.00%
18.3
Enterococcus casseliflavus
RISB0112
Bactrocera dorsalis
Order: Diptera
increase the resistance of B. dorsalis to β-cypermethrin by regulating cytochrome P450 (P450) enzymes and α-glutathione S-transferase (GST) activities
0.19%
18.2
Lactococcus lactis
RISB0113
Bactrocera dorsalis
Order: Diptera
increase the resistance of B. dorsalis to β-cypermethrin by regulating cytochrome P450 (P450) enzymes and α-glutathione S-transferase (GST) activities
0.03%
18.0
Enterococcus faecalis
RISB1411
Bactrocera dorsalis
Order: Diptera
female Bactrocera dorsalis fed Enterococcus faecalis and Klebsiella oxytoca enriched diets lived longer but had lower fecundity
0.49%
18.0
Myroides
RISB0626
Musca altica
Order: Diptera
None
7.85%
17.9
Serratia marcescens
RISB0009
Phormia regina
Order: Diptera
prompted oviposition by flies; The flies' oviposition decisions appear to be guided by bacteria-derived semiochemicals as the bacteria
0.11%
17.8
Stenotrophomonas maltophilia
RISB1227
Delia antiqua
Order: Diptera
six bacteria protect larvae from infection with the entomopathogen Beauveria bassiana through symbiotic bacterium-derived organic acids
0.06%
17.8
Pseudomonas protegens
RISB1224
Delia antiqua
Order: Diptera
six bacteria protect larvae from infection with the entomopathogen Beauveria bassiana through symbiotic bacterium-derived organic acids
0.01%
17.7
Serratia plymuthica
RISB1225
Delia antiqua
Order: Diptera
six bacteria protect larvae from infection with the entomopathogen Beauveria bassiana through symbiotic bacterium-derived organic acids
0.00%
17.7
Comamonas terrigena
RISB2021
Bactrocera dorsalis
Order: Diptera
This group in the immature stages may be helping the insects to cope with oxidative stress by supplementing available oxygen.
0.00%
17.5
Psychrobacter sp. KFRI-CH2-11
RISB1773
Calliphoridae
Order: Diptera
it shows physiological adaptation to survival in warmer temperatures and has been previously associated with food spoilage
0.01%
17.5
Psychrobacter sp. van23A
RISB1773
Calliphoridae
Order: Diptera
it shows physiological adaptation to survival in warmer temperatures and has been previously associated with food spoilage
0.00%
17.4
Morganella morganii
RISB0611
Bactrocera dorsalis
Order: Diptera
may hydrolysing nitrogenous waste and providing metabolizable nitrogen for B. dorsalis
0.54%
17.3
Proteus sp. ZN5
RISB2315
Aedes aegypti
Order: Diptera
upregulates AMP gene expression, resulting in suppression of DENV infection in the mosquito gut epithelium
0.01%
17.1
Proteus sp. NMG38-2
RISB2315
Aedes aegypti
Order: Diptera
upregulates AMP gene expression, resulting in suppression of DENV infection in the mosquito gut epithelium
0.00%
17.1
Stenotrophomonas maltophilia
RISB1141
Hermetia illucens
Order: Diptera
enhance the insect growth performance when reared on an unbalanced nutritionally poor diet
0.06%
16.9
Bacillus licheniformis
RISB1142
Hermetia illucens
Order: Diptera
enhance the insect growth performance when reared on an unbalanced nutritionally poor diet
0.01%
16.8
Enterococcus faecalis
RISB0095
Bactrocera minax
Order: Diptera
egrade phenols in unripe citrus in B. minax larvae
0.49%
16.5
Pantoea dispersa
RISB1413
Bactrocera dorsalis
Order: Diptera
causing female Bactrocera dorsalis laid more eggs but had shorter lifespan
0.00%
16.5
Providencia sp. PROV024
RISB1574
Bactrocera tau
Order: Diptera
could attract male and female B. tau
0.74%
16.5
Stenotrophomonas maltophilia
RISB1401
Delia antiqua
Order: Diptera
suppressed Beauveria bassiana conidia germination and hyphal growth
0.06%
16.4
Bacillus sp. FSL L8-0528
RISB0791
Anopheles barbirostris
Order: Diptera
without this midgut flora showed delayed development to become adult
0.02%
16.4
Bacillus sp. Y1
RISB0791
Anopheles barbirostris
Order: Diptera
without this midgut flora showed delayed development to become adult
0.00%
16.4
Pseudomonas protegens
RISB1398
Delia antiqua
Order: Diptera
suppressed Beauveria bassiana conidia germination and hyphal growth
0.01%
16.4
Raoultella sp. DY2415
RISB1575
Bactrocera tau
Order: Diptera
could attract male and female B. tau
0.43%
16.2
Lactiplantibacillus plantarum
RISB0674
Drosophila melanogaster
Order: Diptera
could effectively inhibit fungal spore germinations
0.06%
16.1
Raoultella sp. X13
RISB1575
Bactrocera tau
Order: Diptera
could attract male and female B. tau
0.27%
16.0
Ignatzschineria
RISB0562
Chrysomya megacephala
Order: Diptera
Ignatzschineria indica is a Gram-negative bacterium commonly associated with maggot infestation and myiasis, a probable marker for myiasis diagnosis
3.02%
16.0
Acinetobacter sp. ANC 7201
RISB2083
Aedes aegypti
Order: Diptera
axenic larvae cannot develop
0.41%
16.0
Raoultella sp. XY-1
RISB1575
Bactrocera tau
Order: Diptera
could attract male and female B. tau
0.19%
15.9
Cedecea lapagei
RISB1570
Bactrocera tau
Order: Diptera
could attract male and female B. tau
0.01%
15.7
Acinetobacter sp. Z1
RISB2083
Aedes aegypti
Order: Diptera
axenic larvae cannot develop
0.10%
15.7
Lactococcus lactis
RISB1167
Bactrocera dorsalis
Order: Diptera
Promote the growth of larvae
0.03%
15.6
Acinetobacter sp. F9
RISB2083
Aedes aegypti
Order: Diptera
axenic larvae cannot develop
0.01%
15.6
Aeromonas sp. FDAARGOS 1417
RISB2086
Aedes aegypti
Order: Diptera
axenic larvae cannot develop
0.01%
15.6
Microbacterium sp. No. 7
RISB2095
Aedes aegypti
Order: Diptera
axenic larvae cannot develop
0.01%
15.6
Paenibacillus sp. FSL K6-2441
RISB2098
Aedes aegypti
Order: Diptera
axenic larvae cannot develop
0.00%
15.6
Aeromonas sp. CU5
RISB2086
Aedes aegypti
Order: Diptera
axenic larvae cannot develop
0.00%
15.6
Microbacterium sp. NIBRBAC000506063
RISB2095
Aedes aegypti
Order: Diptera
axenic larvae cannot develop
0.00%
15.6
Chryseobacterium sp. G0201
RISB2092
Aedes aegypti
Order: Diptera
axenic larvae cannot develop
0.00%
15.6
Vagococcus
RISB0042
Aldrichina grahami
Order: Diptera
None
5.55%
15.6
Pseudomonas protegens
RISB1878
Aedes aegypti
Order: Diptera
gut microbiome
0.01%
15.3
Comamonas testosteroni
RISB1875
Aedes aegypti
Order: Diptera
gut microbiome
0.01%
15.3
Staphylococcus hominis
RISB1881
Aedes aegypti
Order: Diptera
gut microbiome
0.00%
15.3
Lactiplantibacillus plantarum
RISB0608
Drosophila melanogaster
Order: Diptera
None
0.06%
15.1
Wolbachia
RISB0766
Aedes fluviatilis
Order: Diptera
The presence of Wolbachia pipientis improves energy performance in A. fluviatilis cells; it affects the regulation of key energy sources such as lipids, proteins, and carbohydrates, making the distribution of actin more peripheral and with extensions that come into contact with neighboring cells.
0.04%
15.0
Pantoea sp. CCBC3-3-1
RISB1708
Phlebotomus papatasi
Order: Diptera
None
0.01%
15.0
Buchnera aphidicola
RISB0051
Episyrphus balteatus
Order: Diptera
None
0.01%
15.0
Acetobacter oryzifermentans
RISB1742
Drosophila melanogaster
Order: Diptera
None
0.01%
15.0
Pantoea sp. BRR-3P
RISB1708
Phlebotomus papatasi
Order: Diptera
None
0.00%
15.0
Erwinia aphidicola
RISB1705
Phlebotomus papatasi
Order: Diptera
None
0.00%
15.0
Pectobacterium carotovorum
RISB1772
Muscidae
Order: Diptera
None
0.00%
15.0
Bosea sp. PAMC 26642
RISB1702
Phlebotomus papatasi
Order: Diptera
None
0.00%
15.0
Brevundimonas sp. PAMC22021
RISB1703
Phlebotomus papatasi
Order: Diptera
None
0.00%
15.0
Lactobacillus
RISB1866
Drosophila melanogaster
Order: Diptera
The bacterial cells may thus be able to ameliorate the pH of the acidic region, by the release of weak bases.Additionally, the bacteria have a complex relationship with physiological processes which may affect ionic homeostasis in the gut, such as nutrition and immune function
0.00%
15.0
Wolbachia
RISB0779
Drosophila melanogaster
Order: Diptera
Wolbachia infection affects differential gene expression in Drosophila testis.Genes involved in carbohydrate metabolism, lysosomal degradation, proteolysis, lipid metabolism, and immune response were upregulated in the presence of Wolbachia
0.04%
14.8
Escherichia coli
RISB1339
Manduca sexta
Order: Lepidoptera
modulate immunity-related gene expression in the infected F0 larvae, and also in their offspring, triggered immune responses in the infected host associated with shifts in both DNA methylation and histone acetylation
5.41%
14.7
Wolbachia
RISB1408
Anastrepha fraterculus
Order: Diptera
Wolbachia is the only known reproductive symbiont present in these morphotypes. Wolbachia reduced the ability for embryonic development in crosses involving cured females and infected males within each morphotype (uni-directional CI).
0.04%
14.7
Methylobacter
RISB1440
Lutzomyia evansi
Order: Diptera
Methylobacterium can be important in several physiological and metabolic processes in Lu. evansi, which suggests that interactions could occur with Leishmania parasite
0.00%
13.3
Ochrobactrum
RISB0773
Delia antiqua
Order: Diptera
showed significant volatile inhibition activity against fungal entomopathogen Fusarium moniliforme, Botryosphaeria dothidea and both Fusarium oxysporum respectively
0.01%
13.3
Rhodococcus
RISB0775
Delia antiqua
Order: Diptera
showed significant contact inhibition activity against fungal entomopathogen Fusarium moniliforme, Botryosphaeria dothidea and both Fusarium oxysporum respectively
0.02%
13.3
Escherichia coli
RISB0128
Tribolium castaneum
Order: Coleoptera
may produce 4,8-dimethyldecanal (DMD) production that is strongly associated with attraction to females and host pheromone communication
5.41%
13.1
Sodalis
RISB2256
Glossina palpalis
Order: Diptera
flies harbouring this symbiont have three times greater probability of being infected by trypanosomes than flies without the symbiont.
0.00%
12.7
Exiguobacterium
RISB0007
Phormia regina
Order: Diptera
prompted oviposition by flies; The flies' oviposition decisions appear to be guided by bacteria-derived semiochemicals as the bacteria
0.00%
12.7
Shewanella
RISB1924
Anopheles gambiae
Order: Diptera
may be related with mediating adaptation to different ecological niches or in shaping specific adult behaviors including mating
0.05%
12.6
Lactobacillus
RISB0185
Drosophila melanogaster
Order: Diptera
enhancing the brain levels of tyrosine decarboxylase 2 (Tdc2), which is an enzyme that synthesizes octopamine (OA)
0.00%
12.3
Ochrobactrum
RISB1707
Phlebotomus papatasi
Order: Diptera
Ochrobactrum sp. is one of the transstadial bacteria, which is also known to be pathogenic to humans
0.01%
12.0
Gluconobacter
RISB0016
Aedes aegypti
Order: Diptera
Gluconobacter might increase the susceptibility of Ae. aegypti to CHIKV infection.
0.00%
11.6
Sodalis
RISB2471
Glossina morsitans
Order: Diptera
retains a thiamine ABC transporter (tbpAthiPQ) believed to salvage thiamine
0.00%
11.5
Lactobacillus
RISB1714
Drosophila melanogaster
Order: Diptera
It has the potential to reduce IMI-induced susceptibility to infection.
0.00%
11.4
Sodalis
RISB2531
Glossina spp.
Order: Diptera
quorum sensing primes the oxidative stress response of endosymbiont
0.00%
11.3
Actinomyces
RISB1234
Hermetia illucens
Order: Diptera
provides the tools for degrading of a broad range of substrates
0.01%
11.3
Dysgonomonas
RISB1235
Hermetia illucens
Order: Diptera
provides the tools for degrading of a broad range of substrates
0.00%
11.3
Photorhabdus
RISB0532
Drosophila melanogaster
Order: Diptera
produces toxin complex (Tc) toxins as major virulence factors
0.01%
11.2
Komagataeibacter
RISB1883
Drosophila suzukii
Order: Diptera
produce volatile substances that attract female D. suzukii
0.01%
11.2
Gluconobacter
RISB1882
Drosophila suzukii
Order: Diptera
produce volatile substances that attract female D. suzukii
0.00%
11.2
Staphylococcus gallinarum
RISB0945
Callosobruchus maculatus
Order: Coleoptera
The strain encodes complete biosynthetic pathways for the production of B vitamins and amino acids, including tyrosine; A carbohydrate-active enzyme search revealed that the genome codes for a number of digestive enzymes, reflecting the nutritional ecology of C. maculatus
0.75%
10.8
Alcaligenes
RISB1871
Aedes aegypti
Order: Diptera
gut microbiome
0.17%
10.5
Achromobacter
RISB1869
Aedes aegypti
Order: Diptera
gut microbiome
0.01%
10.3
Sphingobium
RISB1880
Aedes aegypti
Order: Diptera
gut microbiome
0.00%
10.3
Peribacillus
RISB1877
Aedes aegypti
Order: Diptera
gut microbiome
0.00%
10.3
Paenibacillus polymyxa
RISB2195
Termitidae
Order: Blattodea
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases that are secreted by gut microbiota to digest the structural and recalcitrant lignocellulosic residues in their foods.
0.01%
10.0
Microbacterium oleivorans
RISB2194
Scirpophaga incertulas
Order: Lepidoptera
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases that are secreted by gut microbiota to digest the structural and recalcitrant lignocellulosic residues in their foods.
0.01%
10.0
Buchnera aphidicola
RISB0236
Acyrthosiphon pisum
Order: Hemiptera
Buchnera the nutritional endosymbiont of A. pisum is located inside of bacteriocytes and requires aspartate from the aphid host, because it cannot make it de novo. Further Buchnera needs aspartate for the biosynthesis of the essential amino acids lysine and threonine, which the aphid and Buchnera require for survival
0.01%
10.0
Gluconobacter
RISB0876
Drosophila suzukii
Order: Diptera
None
0.00%
10.0
Gilliamella apicola
RISB0102
Apis mellifera
Order: Hymenoptera
Gilliamella apicola carries the gene for the desaturase FADS2, which is able to metabolize polyunsaturated fatty acids from pollen and synthesize endocannabinoid, a lipogenic neuroactive substance, thereby modulating reward learning and memory in honeybees.
0.00%
10.0
Variovorax
RISB1712
Phlebotomus papatasi
Order: Diptera
None
0.00%
10.0
Propionibacterium
RISB0490
Ceratitis capitata
Order: Diptera
None
0.00%
10.0
Rahnella aquatilis
RISB1623
Dendroctonus valens
Order: Coleoptera
volatiles from predominant bacteria regulate the consumption sequence of carbon sources d-pinitol and d-glucose in the fungal symbiont Leptographium procerum, and appear to alleviate the antagonistic effect from the fungus against RTB larvae
0.00%
9.8
Buchnera aphidicola
RISB2485
Macrosiphum euphorbiae
Order: Hemiptera
symbiont expression patterns differ between aphid clones with differing levels of virulence, and are influenced by the aphids' host plant. Potentially, symbionts may contribute to differential adaptation of aphids to host plant resistance
0.01%
9.8
Mammaliicoccus sciuri
RISB0075
Bombyx mori
Order: Lepidoptera
could produce a secreted chitinolytic lysozyme (termed Msp1) to damage fungal cell walls,completely inhibit the spore germination of fungal entomopathogens Metarhizium robertsii and Beauveria bassiana
0.43%
9.4
Clostridium sp. SY8519
RISB2301
Pyrrhocoris apterus
Order: Hemiptera
could play an important role for the insect by degrading complex dietary components, providing nutrient supplementation, or detoxifying noxious chemicals (e.g. cyclopropenoic fatty acids or gossypol) in the diet
0.00%
9.2
Staphylococcus xylosus
RISB2497
Anticarsia gemmatalis
Order: Lepidoptera
allow the adaptation of this insect to plants rich in protease inhibitors, minimizing the potentially harmful consequences of protease inhibitors from some of this insect host plants, such as soybean
0.01%
9.0
Streptomyces sp. CA-278952
RISB0943
Polybia plebeja
Order: Hymenoptera
this bacterium produces antimicrobial compounds that are active against Hirsutella citriformis, a natural fungal enemy of its host, and the human pathogens Staphylococcus aureus and Candida albicans
0.03%
9.0
Streptomyces sp. VN1
RISB0943
Polybia plebeja
Order: Hymenoptera
this bacterium produces antimicrobial compounds that are active against Hirsutella citriformis, a natural fungal enemy of its host, and the human pathogens Staphylococcus aureus and Candida albicans
0.01%
9.0
Streptomyces sp. T12
RISB0943
Polybia plebeja
Order: Hymenoptera
this bacterium produces antimicrobial compounds that are active against Hirsutella citriformis, a natural fungal enemy of its host, and the human pathogens Staphylococcus aureus and Candida albicans
0.00%
9.0
Weissella cibaria
RISB1982
Blattella germanica
Order: Blattodea
gut microbiota contributes to production of VCAs that act as fecal aggregation agents and that cockroaches discriminate among the complex odors that emanate from a diverse microbial community
0.01%
8.8
Sphingobacterium sp. LZ7M1
RISB2227
Leptinotarsa decemlineata
Order: Coleoptera
Colorado potato beetle (Leptinotarsa decemlineata) larvae exploit bacteria in their oral secretions to suppress antiherbivore defenses in tomato (Solanum lycopersicum)
0.00%
8.3
Proteus vulgaris
RISB0001
Leptinotarsa decemlineata
Order: Coleoptera
produces toxic hydrogen cyanide (HCN) and a mandelonitrile-producing cyanoglucoside, amygdalin, which protect the insect from predation
0.38%
8.1
Blattabacterium cuenoti
RISB0133
Panesthiinae
Order: Blattodea
enables hosts to subsist on a nutrient-poor diet; endosymbiont genome erosions are associated with repeated host transitions to an underground life
0.00%
7.9
Weissella cibaria
RISB0641
Formica
Order: Hymenoptera
exhibited abilities in catabolizing sugars (sucrose, trehalose, melezitose and raffinose) known to be constituents of hemipteran honeydew
0.01%
7.8
Carnobacterium maltaromaticum
RISB1693
Plutella xylostella
Order: Lepidoptera
play an important role in the breakdown of plant cell walls, detoxification of plant phenolics, and synthesis of amino acids.
0.01%
7.5
Corynebacterium variabile
RISB0363
Pagiophloeus tsushimanus
Order: Coleoptera
terpenoid-degrading: the highest degradation rates of D-camphor, linalool, and eucalyptol
0.70%
7.5
Rahnella aquatilis
RISB1800
Dendroctonus valens
Order: Coleoptera
could alleviate or compromise the antagonistic effects of fungi O. minus and L. procerum on RTB larval growth
0.00%
7.2
Rahnella aquatilis
RISB0741
Dendroctonus ponderosae
Order: Coleoptera
R. aquatilis decreased (−)-α-pinene (38%) and (+)-α-pinene (46%) by 40% and 45% (by GC-MS), respectively
0.00%
7.1
Leclercia adecarboxylata
RISB1757
Spodoptera frugiperda
Order: Lepidoptera
degradation of lambda-cyhalothrin, deltamethrin, chlorpyrifos ethyl, lufenuron and spinosyn
0.06%
6.9
Snodgrassella alvi
RISB1423
Bombus spp.
Order: Hymenoptera
The bumble bee microbiome slightly increases survivorship when the host is exposed to selenate
0.00%
6.9
Micrococcus sp. 2A
RISB2276
Ostrinia nubilalis
Order: Lepidoptera
extreme cellulolytic enzymes, at extreme (pH 12) conditions, exhibited cellulolytic properties
0.00%
6.9
Corynebacterium sp. SCR221107
RISB0531
Helicoverpa armigera
Order: Lepidoptera
Corynebacterium sp. 2-TD, mediates the toxicity of the 2-tridecanone to H. armigera
0.00%
6.7
Carnobacterium maltaromaticum
RISB1692
Plutella xylostella
Order: Lepidoptera
participate in the synthesis of host lacking amino acids histidine and threonine
0.01%
6.6
Frischella perrara
RISB2028
Diceroprocta semicincta
Order: Hemiptera
causes the formation of a scab-like structure on the gut epithelium of its host
0.00%
6.6
Xenorhabdus bovienii
RISB2270
Acyrthosiphon pisum
Order: Hemiptera
have the gene PIN1 encoding the protease inhibitor protein against aphids
0.00%
6.5
Erwinia sp. HDF1-3R
RISB0808
Hypothenemus hampei
Order: Coleoptera
might contribute to caffeine breakdown using the C-12 oxidation pathway
0.01%
6.4
Erwinia sp. E602
RISB0808
Hypothenemus hampei
Order: Coleoptera
might contribute to caffeine breakdown using the C-12 oxidation pathway
0.00%
6.4
Kosakonia sp. BYX6
RISB0810
Hypothenemus hampei
Order: Coleoptera
might contribute to caffeine breakdown using the C-16 oxidation pathway
0.00%
6.4
Glutamicibacter halophytocola
RISB0606
Phthorimaea operculella
Order: Lepidoptera
could degrade the major toxic α-solanine and α-chaconine in potatoes
0.00%
6.4
Leclercia adecarboxylata
RISB1758
Spodoptera frugiperda
Order: Lepidoptera
may influence the metabolization of pesticides in insects
0.06%
6.2
Aeromonas sp. FDAARGOS 1417
RISB2456
Bombyx mori
Order: Lepidoptera
able to utilize the CMcellulose and xylan
0.01%
5.8
Carnobacterium maltaromaticum
RISB1691
Plutella xylostella
Order: Lepidoptera
activity of cellulose and hemicellulose
0.01%
5.8
Methylobacterium sp. FF17
RISB2053
Atractomorpha sinensis
Order: Orthoptera
associated with cellulolytic enzymes
0.00%
5.7
Blattabacterium cuenoti
RISB0518
Cryptocercus punctulatus
Order: Blattodea
collaborative arginine biosynthesis
0.00%
5.7
Blattabacterium cuenoti
RISB0093
Blattella germanica
Order: Blattodea
obligate endosymbiont
0.00%
5.4
Arsenophonus nasoniae
RISB0428
Nasonia vitripennis
Order: Hymenoptera
male killing
0.00%
5.2
Diaphorobacter aerolatus
RISB1062
Oryctes rhinoceros
Order: Coleoptera
gut microbe
0.00%
5.2
Salmonella enterica
RISB0413
Melanaphis sacchari
Order: Hemiptera
None
0.20%
5.2
Bifidobacterium
RISB0174
Apis mellifera
Order: Hymenoptera
Bifidobacterium provides complementary demethylation service to promote Gilliamella growth on methylated homogalacturonan, an enriched polysaccharide of pectin. In exchange, Gilliamella shares digestive products with Bifidobacterium, through which a positive interaction is established
0.04%
5.0
Pseudocitrobacter corydidari
RISB0696
Corydidarum magnifica
Order: Blattodea
None
0.03%
5.0
Burkholderia
RISB1172
Lagria villosa
Order: Coleoptera
process a cryptic gene cluster that codes for the biosynthesis of a novel antifungal polyketide with a glutarimide pharmacophore, which led to the discovery of the gladiofungins as previously-overlooked components of the antimicrobial armory of the beetle symbiont
0.02%
5.0
Cedecea lapagei
RISB0504
Plutella xylostella
Order: Lepidoptera
None
0.01%
5.0
Agrobacterium tumefaciens
RISB0650
Melanaphis bambusae
Order: Hemiptera
None
0.01%
5.0
Trabulsiella
RISB2201
Termitidae
Order: Blattodea
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases that are secreted by gut microbiota to digest the structural and recalcitrant lignocellulosic residues in their foods.
0.01%
5.0
Gilliamella apicola
RISB1945
Apis cerana
Order: Hymenoptera
None
0.00%
5.0
Snodgrassella alvi
RISB1947
Apis cerana
Order: Hymenoptera
None
0.00%
5.0
Arsenophonus nasoniae
RISB0366
Pachycrepoideus vindemmiae
Order: Hymenoptera
None
0.00%
5.0
Yersinia massiliensis
RISB0407
Anaphes nitens
Order: Hymenoptera
None
0.00%
5.0
Cupriavidus pauculus
RISB0694
Alydus tomentosus
Order: Hemiptera
None
0.00%
5.0
Candidatus Megaera polyxenophila
RISB0587
Multiple species
Order: None
None
0.00%
5.0
Zymomonas mobilis
RISB1326
Vespa mandarinia
Order: Hymenoptera
None
0.00%
5.0
Candidatus Regiella
RISB1370
Sitobion avenae
Order: Hemiptera
Regiella infection decreased the intrinsic rate of increase (rm) of aphids at 25 °C and 28 °C. However, at 31 °C, the effect of Regiella on the rm varied depending on the aphid genotype and density. Thus, the negative effects of this endosymbiont on its host were environmentally dependent.
0.00%
5.0
Rhodobacter
RISB0138
Coccinella septempunctata
Order: Coleoptera
Rhodanobacter genera can utilize various carbon sources, including cellobiose. In larvae of longhorned beetles that feed on plants rich in carbohydrates (cellulose and hemicellulose) and lignin, Rhodanobacter can help the larvae digest more carbon nutrients through carbon sequestration
0.00%
5.0
Cellulosimicrobium
RISB2182
Armadillidae
Order: Isopoda
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases that are secreted by gut microbiota to digest the structural and recalcitrant lignocellulosic residues in their foods.
0.00%
5.0
Deinococcus
RISB1649
Camponotus japonicus
Order: Hymenoptera
Four new aminoglycolipids, deinococcucins A–D, were discovered from a Deinococcus sp. strain isolated from the gut of queen carpenter ants, Camponotus japonicus, showed functional ability of inducing the quinone reductase production in host cells
0.00%
4.9
Treponema
RISB2377
termite
Order: Blattodea
when grown together, two termite-gut Treponema species influence each other's gene expression in a far more comprehensive and nuanced manner than might have been predicted based on the results of previous studies on the respective pure cultures
0.00%
4.9
Candidatus Regiella
RISB1819
Sitobion avenae
Order: Hemiptera
In R. insecticola-infected aphid lines, there were increases in plasticities for developmental times of first and second instar nymphs and for fecundity, showing novel functional roles of bacterial symbionts in plant-insect interactions.
0.00%
4.7
Burkholderia
RISB1729
Lagria hirta
Order: Coleoptera
the symbionts inhibit the growth of antagonistic fungi on the eggs of the insect host, indicating that the Lagria-associated Burkholderia have evolved from plant pathogenic ancestors into insect defensive mutualists
0.02%
4.3
Burkholderia
RISB0402
Riptortus pedestris
Order: Hemiptera
symbiont colonization induces the development of the midgut crypts via finely regulating the enterocyte cell cycles, enabling it to stably and abundantly colonize the generated spacious crypts of the bean bug host
0.02%
4.3
Candidatus Regiella
RISB1363
Sitobion avenae
Order: Hemiptera
R. insecticola-infected aphids were more predated by the ladybird Hippodamia variegata irrespective of host plants and did not improve defences against coccinellid predators or metabolic rates on any host plants
0.00%
4.2
Gordonibacter
RISB2303
Pyrrhocoris apterus
Order: Hemiptera
could play an important role for the insect by degrading complex dietary components, providing nutrient supplementation, or detoxifying noxious chemicals (e.g. cyclopropenoic fatty acids or gossypol) in the diet
0.00%
4.2
Gordonibacter
RISB2126
Dysdercus fasciatus
Order: Hemiptera
Elimination of symbionts by egg-surface sterilization resulted in significantly higher mortality and reduced growth rates, indicating that the microbial community plays an important role for host nutrition
0.00%
4.1
Sphingobium
RISB1837
Dendroctonus valens
Order: Coleoptera
It can trongly degrade naringenin, and pinitol, the main soluble carbohydrate of P. tabuliformis, is retained in L. procerum-infected phloem and facilitate naringenin biodegradation by the microbiotas.
0.00%
4.0
Novosphingobium
RISB1837
Dendroctonus valens
Order: Coleoptera
It can trongly degrade naringenin, and pinitol, the main soluble carbohydrate of P. tabuliformis, is retained in L. procerum-infected phloem and facilitate naringenin biodegradation by the microbiotas.
0.00%
4.0
Xanthomonas
RISB0498
Xylocopa appendiculata
Order: Hymenoptera
Xanthomonas strain from Japanese carpenter bee is effective PU-degradable bacterium and is able to use polyacryl-based PU as a nutritional source, as well as other types of PS-PU and PE-PU
0.00%
3.8
Photorhabdus
RISB2532
Manduca sexta
Order: Lepidoptera
produces a small-molecule antibiotic (E)-1,3-dihydroxy-2-(isopropyl)-5-(2-phenylethenyl)benzene (ST) that also acts as an inhibitor of phenoloxidase (PO) in the insect host Manduca sexta.
0.01%
3.8
Bifidobacterium
RISB0616
Spodoptera frugiperda
Order: Lepidoptera
Strain wkB204 grew in the presence of amygdalin as the sole carbon source, suggesting that this strain degrades amygdalin and is not susceptible to the potential byproducts
0.04%
3.5
Amycolatopsis
RISB0483
Trachymyrmex smithi
Order: Hymenoptera
inhibited the growth of Pseudonocardia symbionts under laboratory conditions. The novel analog nocamycin V from the strain was identified as the antibacterial compound
0.01%
3.4
Symbiopectobacterium
RISB1889
Pseudococcus longispinus
Order: Hemiptera
a nested symbiotic arrangement, where one bacterium lives inside another bacterium,occurred in building the mosaic metabolic pathways seen in mitochondria and plastids
0.00%
3.3
Amycolatopsis
RISB0199
Trachymyrmex
Order: Hymenoptera
produce antibiotic EC0-0501 that has strong activity against ant-associated Actinobacteria and may also play a role in bacterial competition in this niche
0.01%
3.1
Yokenella
RISB1492
Nezara viridula
Order: Hemiptera
help stinkbugs to feed on soybean developing seeds in spite of its chemical defenses by degrading isoflavonoids and deactivate soybean protease inhibitors
0.00%
3.1
Tsukamurella
RISB1531
Hoplothrips carpathicus
Order: Thysanoptera
This genus was identified as dominant in intensively feeding second-stage larvae and suggests a mechanism by which L2 larvae might process cellulose.
0.00%
3.0
Photorhabdus
RISB2573
Manduca sexta
Order: Lepidoptera
the bacteria are symbiotic with entomopathogenic nematodes but become pathogenic on release from the nematode into the insect blood system
0.01%
2.8
Bartonella
RISB1673
Apis mellifera
Order: Hymenoptera
a gut symbiont of insects and that the adaptation to blood-feeding insects facilitated colonization of the mammalian bloodstream
0.00%
2.6
Nocardia
RISB0947
Acromyrmex
Order: Hymenoptera
Pseudonocardia in the Acromyrmex leaf-cutter ants as a protective partner against the entomopathogenic fungus Metarhizium
0.01%
2.4
Pseudonocardia
RISB0947
Acromyrmex
Order: Hymenoptera
Pseudonocardia in the Acromyrmex leaf-cutter ants as a protective partner against the entomopathogenic fungus Metarhizium
0.00%
2.4
Bacteroides
RISB0256
Leptocybe invasa
Order: Hymenoptera
Differences in Male-Killing Rickettsia Bacteria between Lineages of the Invasive Gall-Causing Pest Leptocybe invasa
0.01%
2.3
Bacteroides
RISB0090
Hyphantria cunea
Order: Lepidoptera
enhance the compatibility of invasive pests to new hosts and enable more rapid adaptation to new habitats.
0.01%
2.1
Blautia
RISB0091
Hyphantria cunea
Order: Lepidoptera
enhance the compatibility of invasive pests to new hosts and enable more rapid adaptation to new habitats.
0.01%
2.1
Coprococcus
RISB0092
Hyphantria cunea
Order: Lepidoptera
enhance the compatibility of invasive pests to new hosts and enable more rapid adaptation to new habitats.
0.00%
2.1
Nocardia
RISB1218
Mycocepurus smithii
Order: Hymenoptera
produce secondary metabolites with antibiotic activity that protects the fungus garden against pathogens
0.01%
2.1
Pseudonocardia
RISB1218
Mycocepurus smithii
Order: Hymenoptera
produce secondary metabolites with antibiotic activity that protects the fungus garden against pathogens
0.00%
2.1
Streptococcus
RISB2625
Galleria mellonella
Order: Lepidoptera
suppress bacteria ingested with food by producing bacteriocin and by releasing a lysozyme like enzyme
0.05%
2.1
Bacteroides
RISB1183
Oryzaephilus surinamensis
Order: Coleoptera
supplement precursors for the cuticle synthesis and thereby enhance desiccation resistance of its host
0.01%
2.1
Kluyvera
RISB1064
Oryctes rhinoceros
Order: Coleoptera
gut microbe
1.82%
2.0
Delftia
RISB0083
Osmia cornifrons
Order: Hymenoptera
be known to exhibit antibiotic activity, suggesting their potential protective role against pathogens
0.01%
2.0
Sphingomonas
RISB0420
Aphis gossypii
Order: Hemiptera
Sphingomonas could mediate A. gossypii resistance to imidacloprid by hydroxylation and nitroreduction
0.00%
2.0
Rhodococcus
RISB0430
Rhodnius prolixus
Order: Hemiptera
Rhodnius prolixus harbouring R. rhodnii developed faster, had higher survival, and laid more eggs
0.02%
2.0
Xanthomonas
RISB0217
Xylocopa appendiculata
Order: Hymenoptera
strains biodegraded polyethylene terephthalate PET powder, broke it into its degradation products
0.00%
1.9
Sphingomonas
RISB1307
Aphis gossypii
Order: Hemiptera
have been previously described in associations with phloem-feeding insects, in low abundances
0.00%
1.9
Streptococcus
RISB2624
Reticulitermes flavipes
Order: Blattodea
can be broken down into substances such as carbon dioxide, ammonia and acetic acid
0.05%
1.7
Sphingomonas
RISB0134
Spodoptera frugiperda
Order: Lepidoptera
provide a protective effect to against chlorantraniliprole stress to S. frugiperda
0.00%
1.6
Rhizobium
RISB0135
Coccinella septempunctata
Order: Coleoptera
be commonly found in plant roots and they all have nitrogen fixation abilities
0.02%
1.6
Bradyrhizobium
RISB0135
Coccinella septempunctata
Order: Coleoptera
be commonly found in plant roots and they all have nitrogen fixation abilities
0.02%
1.6
Vibrio
RISB1810
Monochamus galloprovincialis
Order: Coleoptera
Have the ability for degradation of cellulose, proteins and starch
0.16%
1.5
Leuconostoc
RISB0812
Hypothenemus hampei
Order: Coleoptera
might contribute to caffeine breakdown using the C-18 oxidation pathway
0.02%
1.4
Delftia
RISB0806
Hypothenemus hampei
Order: Coleoptera
might contribute to caffeine breakdown using the C-19 oxidation pathway
0.01%
1.4
Nostoc
RISB0812
Hypothenemus hampei
Order: Coleoptera
might contribute to caffeine breakdown using the C-18 oxidation pathway
0.00%
1.4
Halomonas
RISB1808
Monochamus galloprovincialis
Order: Coleoptera
Have the ability for degradation of cellulose, proteins and starch
0.02%
1.3
Variovorax
RISB2153
Osmia bicornis
Order: Hymenoptera
may be essential to support Osmia larvae in their nutrient uptake
0.00%
1.3
Massilia
RISB2151
Osmia bicornis
Order: Hymenoptera
may be essential to support Osmia larvae in their nutrient uptake
0.00%
1.3
Streptococcus
RISB2604
Homona magnanima
Order: Lepidoptera
influence the growth of Bacillus thuringiensis in the larvae
0.05%
1.3
Delftia
RISB1754
Spodoptera frugiperda
Order: Lepidoptera
may influence the metabolization of pesticides in insects
0.01%
1.2
Paraclostridium
RISB0028
Sesamia inferens
Order: Lepidoptera
degrade Chlorpyrifos and Chlorantraniliprole in vitro
0.00%
1.1
Rhodococcus
RISB1087
Rhodnius prolixus
Order: Hemiptera
supply enzymatic biosynthesis of B-complex vitamins
0.02%
1.0
Cronobacter
RISB0247
Tenebrio molitor
Order: Coleoptera
may be indirectly involved in the digestion of PE
0.06%
1.0
Dickeya
RISB1086
Rhodnius prolixus
Order: Hemiptera
supply enzymatic biosynthesis of B-complex vitamins
0.02%
1.0
Lysinibacillus
RISB1416
Psammotermes hypostoma
Order: Blattodea
isolates showed significant cellulolytic activity
0.00%
1.0
Brevibacterium
RISB0464
Acrida cinerea
Order: Orthoptera
correlated with the hemicellulose digestibility
0.02%
1.0
Clavibacter
RISB0465
Trilophidia annulata
Order: Orthoptera
correlated with the hemicellulose digestibility
0.00%
0.9
Exiguobacterium
RISB0582
Aleurodicus rugioperculatus
Order: Hemiptera
may indirectly affect whitefly oviposition
0.00%
0.8
Nocardioides
RISB1914
Hyles euphorbiae
Order: Lepidoptera
able to degrade alkaloids and/or latex
0.05%
0.8
Brevibacterium
RISB2359
Bombyx mori
Order: Lepidoptera
producing lipase in a gut environment
0.02%
0.8
Gordonia
RISB1912
Hyles euphorbiae
Order: Lepidoptera
able to degrade alkaloids and/or latex
0.01%
0.8
Methylobacter
RISB2053
Atractomorpha sinensis
Order: Orthoptera
associated with cellulolytic enzymes
0.00%
0.7
Trabulsiella
RISB1685
Melolontha hippocastani
Order: Coleoptera
Involved in cellulose degradation
0.01%
0.7
Mycobacterium
RISB1156
Nicrophorus concolor
Order: Coleoptera
produces Antimicrobial compounds
0.01%
0.7
Turicibacter
RISB0451
Odontotaenius disjunctus
Order: Coleoptera
degrading  ellulose and xylan
0.01%
0.6
Exiguobacterium
RISB1152
Tenebrio molitor
Order: Coleoptera
degrading plastics
0.00%
0.4
Priestia
RISB0839
Helicoverpa armigera
Order: Lepidoptera
producing amylase
0.01%
0.4
Methylobacter
RISB2340
Saturniidae
Order: Lepidoptera
Nitrogen fixation
0.00%
0.3
Lysinibacillus
RISB1066
Oryctes rhinoceros
Order: Coleoptera
gut microbe
0.00%
0.2
Bifidobacterium
RISB1944
Apis cerana
Order: Hymenoptera
None
0.04%
0.0
Halomonas
RISB1374
Bemisia tabaci
Order: Hemiptera
None
0.02%
0.0
Brevibacterium
RISB0897
Myzus persicae
Order: Hemiptera
None
0.02%
0.0
Flavobacterium
RISB0659
Melanaphis bambusae
Order: Hemiptera
None
0.02%
0.0
Achromobacter
RISB0383
Aphis gossypii
Order: Hemiptera
None
0.01%
0.0
Legionella
RISB1687
Polyplax serrata
Order: Phthiraptera
None
0.01%
0.0
Dysgonomonas
RISB1481
Brachinus elongatulus
Order: Coleoptera
None
0.00%
0.0
Treponema
RISB0169
Reticulitermes flaviceps
Order: Blattodea
None
0.00%
0.0
Gordonibacter
RISB1960
Pyrrhocoridae
Order: Hemiptera
None
0.00%
0.0
Candidatus Profftia
RISB1664
Adelgidae
Order: Hemiptera
None
0.00%
0.0
Gibbsiella
RISB1320
Vespa mandarinia
Order: Hymenoptera
None
0.00%
0.0
Lonsdalea
RISB1321
Vespa mandarinia
Order: Hymenoptera
None
0.00%
0.0
Paraburkholderia
RISB0125
Physopelta gutta
Order: Hemiptera
None
0.00%
0.0
Neisseria
RISB0512
Plutella xylostella
Order: Lepidoptera
None
0.00%
0.0
Methylorubrum
RISB0903
Myzus persicae
Order: Hemiptera
None
0.00%
0.0
Kaistia
RISB0829
Spodoptera frugiperda
Order: Lepidoptera
None
0.00%
0.0
Tistrella
RISB0270
Recilia dorsalis
Order: Hemiptera
None
0.00%
0.0
Geobacillus
RISB1251
Potamobates horvathi
Order: Hemiptera
None
0.00%
0.0
Selenomonas
RISB1305
Aphis gossypii
Order: Hemiptera
None
0.00%
0.0
Micromonospora
RISB2033
Palomena viridissima
Order: Hemiptera
None
0.00%
0.0
Helicobacter
RISB0662
Melanaphis bambusae
Order: Hemiptera
None
0.00%
0.0

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