SRR24540847 - Musca domestica
Basic Information
Run: SRR24540847
Assay Type: WGS
Bioproject: PRJNA948024
Biosample: SAMN33900173
Bytes: 881235067
Center Name: USDA
Sequencing Information
Instrument: HiSeq X Ten
Library Layout: PAIRED
Library Selection: RANDOM
Platform: ILLUMINA
Quality Control Information
Filter Percentage: -
QC Average Length: -
Retained Reads: -
Geographic Information
Country: USA
Continent: North America
Location Name: USA:TEXAS
Latitude/Longitude: not collected
Sample Information
Host: Musca domestica
Isolation: Dairy Barns
Biosample Model: Metagenome or environmental
Collection Date: 2018-06
Taxonomic Classification
Potential Symbionts
About Potential Symbionts
This table shows potential symbiont identified in the metagenome sample. Matches are scored based on:
- Relative abundance in the sample
- Species-level matches with known symbionts
- Host insect order matches with reference records
- Completeness and richness of functional records
Based on our current records database, this section aims to identify potential functional symbionts in this metagenome sample, with scoring based on:
- Relative abundance in sample
- Species-level matches with known symbionts
- Host insect order matches
- Functional record completeness
Note: Showing top 3 highest scoring records for each species/genus
| Symbiont Name | Record | Host Species | Function | Abundance |
Score
Score Composition:
Higher scores indicate stronger symbiotic relationship potential |
|---|---|---|---|---|---|
|
Klebsiella oxytoca
Species-level Match
Host Order Match
Host Species Match
|
RISB1139 |
Musca domestica
Order: Diptera
|
It is associated to newly laid housefly eggs, where it is deposited by the female, and has a role in oviposition as well as protection against potential pathogens
|
0.09% |
38.3
|
|
Acinetobacter sp. ANC 7201
Species-level Match
Host Order Match
|
RISB2083 |
Aedes aegypti
Order: Diptera
|
axenic larvae cannot develop
|
8.59% |
24.2
|
|
Lactococcus lactis
Species-level Match
Host Order Match
|
RISB0131 |
Ceratitis capitata
Order: Diptera
|
The intestinal microbiota structure was significantly influenced by the probiotic treatment while still maintaining a stable core dominant community of Enterobacteriacea. The colony with these microbiome had the most improved potential functions in terms of gut microbes as well as the carbohydrates active enzymes most improved potential functions.
|
0.18% |
20.2
|
|
Klebsiella oxytoca
Species-level Match
Host Order Match
|
RISB0130 |
Ceratitis capitata
Order: Diptera
|
The intestinal microbiota structure was significantly influenced by the probiotic treatment while still maintaining a stable core dominant community of Enterobacteriacea. The colony with these microbiome had the most improved potential functions in terms of gut microbes as well as the carbohydrates active enzymes most improved potential functions.
|
0.09% |
20.1
|
|
Enterobacter sp. JUb54
Species-level Match
Host Order Match
|
RISB0893 |
Bactrocera dorsalis
Order: Diptera
|
be beneficial, with some quality control indices, such as adult size, pupal weight, survival rate under stress and nutritionally rich conditions, and mating competitiveness, being significantly increased, while slight nonsignificant increases in emergence rate and flight ability were observed
|
0.01% |
20.0
|
|
Listeria monocytogenes
Species-level Match
Host Order Match
|
RISB2308 |
Drosophila melanogaster
Order: Diptera
|
L. monocytogenes infection disrupts host energy metabolism by depleting energy stores (triglycerides and glycogen) and reducing metabolic pathway activity (beta-oxidation and glycolysis). The infection affects antioxidant defense by reducing uric acid levels and alters amino acid metabolism. These metabolic changes are accompanied by melanization, potentially linked to decreased tyrosine levels.
|
0.01% |
20.0
|
|
Enterobacter sp. C2
Species-level Match
Host Order Match
|
RISB0893 |
Bactrocera dorsalis
Order: Diptera
|
be beneficial, with some quality control indices, such as adult size, pupal weight, survival rate under stress and nutritionally rich conditions, and mating competitiveness, being significantly increased, while slight nonsignificant increases in emergence rate and flight ability were observed
|
0.00% |
20.0
|
|
Citrobacter freundii
Species-level Match
Host Order Match
|
RISB1221 |
Delia antiqua
Order: Diptera
|
six bacteria protect larvae from infection with the entomopathogen Beauveria bassiana through symbiotic bacterium-derived organic acids
|
1.99% |
19.7
|
|
Morganella morganii
Species-level Match
Host Order Match
|
RISB0772 |
Delia antiqua
Order: Diptera
|
showed significant volatile inhibition activity against fungal entomopathogen Fusarium moniliforme, Botryosphaeria dothidea and both Fusarium oxysporum respectively
|
1.19% |
19.5
|
|
Enterobacter sp. JUb54
Species-level Match
Host Order Match
|
RISB1338 |
Ceratitis capitata
Order: Diptera
|
Enterobacter sp. AA26 dry biomass can fully replace the brewer’s yeast as a protein source in medfly larval diet without any effect on the productivity and the biological quality of reared medfly of VIENNA 8 GSS
|
0.01% |
19.2
|
|
Morganella morganii
Species-level Match
Host Order Match
|
RISB0008 |
Phormia regina
Order: Diptera
|
deterred oviposition by female stable flies; The flies' oviposition decisions appear to be guided by bacteria-derived semiochemicals as the bacteria
|
1.19% |
19.2
|
|
Klebsiella michiganensis
Species-level Match
Host Order Match
|
RISB1052 |
Bactrocera dorsalis
Order: Diptera
|
K. michiganensis BD177 has the strain-specific ability to provide three essential amino acids (phenylalanine, tryptophan and methionine) and two vitamins B (folate and riboflavin) to B. dorsalis
|
0.24% |
19.1
|
|
Citrobacter sp. 172116965
Species-level Match
Host Order Match
|
RISB1503 |
Bactrocera dorsalis
Order: Diptera
|
Pesticide-degrading bacteria were frequently detected from pesticide-resistant insects. Susceptible insects became resistant after inoculation of the pesticide-degrading symbiont
|
0.55% |
19.1
|
|
Citrobacter sp. RHBSTW-00986
Species-level Match
Host Order Match
|
RISB1503 |
Bactrocera dorsalis
Order: Diptera
|
Pesticide-degrading bacteria were frequently detected from pesticide-resistant insects. Susceptible insects became resistant after inoculation of the pesticide-degrading symbiont
|
0.37% |
18.9
|
|
Serratia marcescens
Species-level Match
Host Order Match
|
RISB1291 |
Aedes aegypti
Order: Diptera
|
facilitates arboviral infection through a secreted protein named SmEnhancin, which digests membrane-bound mucins on the mosquito gut epithelia, thereby enhancing viral dissemination.
|
0.04% |
18.7
|
|
Acinetobacter sp. F9
Species-level Match
Host Order Match
|
RISB2083 |
Aedes aegypti
Order: Diptera
|
axenic larvae cannot develop
|
3.09% |
18.7
|
|
Psychrobacter sp. van23A
Species-level Match
Host Order Match
|
RISB1773 |
Calliphoridae
Order: Diptera
|
it shows physiological adaptation to survival in warmer temperatures and has been previously associated with food spoilage
|
1.14% |
18.6
|
|
Acinetobacter guillouiae
Species-level Match
Host Order Match
|
RISB0768 |
Delia antiqua
Order: Diptera
|
showed significant volatile inhibition activity against fungal entomopathogen Fusarium moniliforme, Botryosphaeria dothidea and both Fusarium oxysporum respectively
|
0.03% |
18.3
|
|
Arthrobacter sp. YC-RL1
Species-level Match
Host Order Match
|
RISB0769 |
Delia antiqua
Order: Diptera
|
showed significant volatile inhibition activity against fungal entomopathogen Fusarium moniliforme, Botryosphaeria dothidea and both Fusarium oxysporum respectively
|
0.01% |
18.3
|
|
Leucobacter aridicollis
Species-level Match
Host Order Match
|
RISB0771 |
Delia antiqua
Order: Diptera
|
showed significant contact inhibition activity against fungal entomopathogen Fusarium moniliforme, Botryosphaeria dothidea and both Fusarium oxysporum respectively
|
0.00% |
18.3
|
|
Lactococcus lactis
Species-level Match
Host Order Match
|
RISB0113 |
Bactrocera dorsalis
Order: Diptera
|
increase the resistance of B. dorsalis to β-cypermethrin by regulating cytochrome P450 (P450) enzymes and α-glutathione S-transferase (GST) activities
|
0.18% |
18.2
|
|
Enterococcus casseliflavus
Species-level Match
Host Order Match
|
RISB0112 |
Bactrocera dorsalis
Order: Diptera
|
increase the resistance of B. dorsalis to β-cypermethrin by regulating cytochrome P450 (P450) enzymes and α-glutathione S-transferase (GST) activities
|
0.03% |
18.0
|
|
Morganella morganii
Species-level Match
Host Order Match
|
RISB0611 |
Bactrocera dorsalis
Order: Diptera
|
may hydrolysing nitrogenous waste and providing metabolizable nitrogen for B. dorsalis
|
1.19% |
17.9
|
|
Serratia marcescens
Species-level Match
Host Order Match
|
RISB0009 |
Phormia regina
Order: Diptera
|
prompted oviposition by flies; The flies' oviposition decisions appear to be guided by bacteria-derived semiochemicals as the bacteria
|
0.04% |
17.7
|
|
Sphingobacterium faecium
Species-level Match
Host Order Match
|
RISB1226 |
Delia antiqua
Order: Diptera
|
six bacteria protect larvae from infection with the entomopathogen Beauveria bassiana through symbiotic bacterium-derived organic acids
|
0.01% |
17.7
|
|
Serratia plymuthica
Species-level Match
Host Order Match
|
RISB1225 |
Delia antiqua
Order: Diptera
|
six bacteria protect larvae from infection with the entomopathogen Beauveria bassiana through symbiotic bacterium-derived organic acids
|
0.00% |
17.7
|
|
Stenotrophomonas maltophilia
Species-level Match
Host Order Match
|
RISB1227 |
Delia antiqua
Order: Diptera
|
six bacteria protect larvae from infection with the entomopathogen Beauveria bassiana through symbiotic bacterium-derived organic acids
|
0.00% |
17.7
|
|
Enterococcus faecalis
Species-level Match
Host Order Match
|
RISB1411 |
Bactrocera dorsalis
Order: Diptera
|
female Bactrocera dorsalis fed Enterococcus faecalis and Klebsiella oxytoca enriched diets lived longer but had lower fecundity
|
0.10% |
17.6
|
|
Psychrobacter sp. WB2
Species-level Match
Host Order Match
|
RISB1773 |
Calliphoridae
Order: Diptera
|
it shows physiological adaptation to survival in warmer temperatures and has been previously associated with food spoilage
|
0.12% |
17.6
|
|
Comamonas terrigena
Species-level Match
Host Order Match
|
RISB2021 |
Bactrocera dorsalis
Order: Diptera
|
This group in the immature stages may be helping the insects to cope with oxidative stress by supplementing available oxygen.
|
0.00% |
17.5
|
|
Psychrobacter sp. KFRI-CH2-11
Species-level Match
Host Order Match
|
RISB1773 |
Calliphoridae
Order: Diptera
|
it shows physiological adaptation to survival in warmer temperatures and has been previously associated with food spoilage
|
0.04% |
17.5
|
|
Ignatzschineria
Host Order Match
|
RISB0562 |
Chrysomya megacephala
Order: Diptera
|
Ignatzschineria indica is a Gram-negative bacterium commonly associated with maggot infestation and myiasis, a probable marker for myiasis diagnosis
|
4.37% |
17.3
|
|
Proteus sp. ZN5
Species-level Match
Host Order Match
|
RISB2315 |
Aedes aegypti
Order: Diptera
|
upregulates AMP gene expression, resulting in suppression of DENV infection in the mosquito gut epithelium
|
0.01% |
17.1
|
|
Proteus sp. NMG38-2
Species-level Match
Host Order Match
|
RISB2315 |
Aedes aegypti
Order: Diptera
|
upregulates AMP gene expression, resulting in suppression of DENV infection in the mosquito gut epithelium
|
0.00% |
17.1
|
|
Stenotrophomonas maltophilia
Species-level Match
Host Order Match
|
RISB1141 |
Hermetia illucens
Order: Diptera
|
enhance the insect growth performance when reared on an unbalanced nutritionally poor diet
|
0.00% |
16.8
|
|
Providencia rettgeri
Species-level Match
Host Order Match
|
RISB1001 |
Anastrepha obliqua
Order: Diptera
|
improve the sexual competitiveness of males
|
0.84% |
16.7
|
|
Pantoea dispersa
Species-level Match
Host Order Match
|
RISB1413 |
Bactrocera dorsalis
Order: Diptera
|
causing female Bactrocera dorsalis laid more eggs but had shorter lifespan
|
0.00% |
16.5
|
|
Providencia rettgeri
Species-level Match
Host Order Match
|
RISB1169 |
Bactrocera dorsalis
Order: Diptera
|
Promote the growth of larvae
|
0.84% |
16.4
|
|
Bacillus sp. Y1
Species-level Match
Host Order Match
|
RISB0791 |
Anopheles barbirostris
Order: Diptera
|
without this midgut flora showed delayed development to become adult
|
0.00% |
16.4
|
|
Sphingobacterium faecium
Species-level Match
Host Order Match
|
RISB1400 |
Delia antiqua
Order: Diptera
|
suppressed Beauveria bassiana conidia germination and hyphal growth
|
0.01% |
16.4
|
|
Stenotrophomonas maltophilia
Species-level Match
Host Order Match
|
RISB1401 |
Delia antiqua
Order: Diptera
|
suppressed Beauveria bassiana conidia germination and hyphal growth
|
0.00% |
16.3
|
|
Enterococcus faecalis
Species-level Match
Host Order Match
|
RISB0095 |
Bactrocera minax
Order: Diptera
|
egrade phenols in unripe citrus in B. minax larvae
|
0.10% |
16.1
|
|
Providencia sp. R33
Species-level Match
Host Order Match
|
RISB1574 |
Bactrocera tau
Order: Diptera
|
could attract male and female B. tau
|
0.34% |
16.1
|
|
Lactiplantibacillus plantarum
Species-level Match
Host Order Match
|
RISB0674 |
Drosophila melanogaster
Order: Diptera
|
could effectively inhibit fungal spore germinations
|
0.02% |
16.0
|
|
Escherichia coli
Species-level Match
Host Order Match
|
RISB1769 |
Calliphoridae
Order: Diptera
|
None
|
1.00% |
16.0
|
|
Raoultella sp. X13
Species-level Match
Host Order Match
|
RISB1575 |
Bactrocera tau
Order: Diptera
|
could attract male and female B. tau
|
0.06% |
15.8
|
|
Raoultella sp. HC6
Species-level Match
Host Order Match
|
RISB1575 |
Bactrocera tau
Order: Diptera
|
could attract male and female B. tau
|
0.05% |
15.8
|
|
Lactococcus lactis
Species-level Match
Host Order Match
|
RISB1167 |
Bactrocera dorsalis
Order: Diptera
|
Promote the growth of larvae
|
0.18% |
15.7
|
|
Cedecea lapagei
Species-level Match
Host Order Match
|
RISB1570 |
Bactrocera tau
Order: Diptera
|
could attract male and female B. tau
|
0.00% |
15.7
|
|
Bacillus thuringiensis
Species-level Match
Host Order Match
|
RISB0820 |
Simulium tani
Order: Diptera
|
show resistance to some antibiotics
|
0.00% |
15.7
|
|
Aeromonas sp. CU5
Species-level Match
Host Order Match
|
RISB2086 |
Aedes aegypti
Order: Diptera
|
axenic larvae cannot develop
|
0.00% |
15.6
|
|
Chryseobacterium sp. POL2
Species-level Match
Host Order Match
|
RISB2092 |
Aedes aegypti
Order: Diptera
|
axenic larvae cannot develop
|
0.00% |
15.6
|
|
Comamonas testosteroni
Species-level Match
Host Order Match
|
RISB1875 |
Aedes aegypti
Order: Diptera
|
gut microbiome
|
0.01% |
15.3
|
|
Bacillus cereus
Species-level Match
Host Order Match
|
RISB1872 |
Aedes aegypti
Order: Diptera
|
gut microbiome
|
0.00% |
15.3
|
|
Wolbachia
Host Order Match
|
RISB0766 |
Aedes fluviatilis
Order: Diptera
|
The presence of Wolbachia pipientis improves energy performance in A. fluviatilis cells; it affects the regulation of key energy sources such as lipids, proteins, and carbohydrates, making the distribution of actin more peripheral and with extensions that come into contact with neighboring cells.
|
0.05% |
15.1
|
|
Lactiplantibacillus plantarum
Species-level Match
Host Order Match
|
RISB0608 |
Drosophila melanogaster
Order: Diptera
|
None
|
0.02% |
15.0
|
|
Buchnera aphidicola
Species-level Match
Host Order Match
|
RISB0051 |
Episyrphus balteatus
Order: Diptera
|
None
|
0.00% |
15.0
|
|
Acetobacter
Host Order Match
|
RISB1865 |
Drosophila melanogaster
Order: Diptera
|
The bacterial cells may thus be able to ameliorate the pH of the acidic region, by the release of weak bases.Additionally, the bacteria have a complex relationship with physiological processes which may affect ionic homeostasis in the gut, such as nutrition and immune function
|
0.00% |
15.0
|
|
Candidatus Cardinium
Host Order Match
|
RISB1439 |
Lutzomyia evansi
Order: Diptera
|
‘Candidatus Cardinium’ is a recently described bacterium from the Bacteroidetes group involved in diverse reproduction alterations of its arthropod hosts (including cytoplasmic incompatibility, parthenogenesis, and feminization) similar to Wolbachia
|
0.00% |
15.0
|
|
Wolbachia
Host Order Match
|
RISB0779 |
Drosophila melanogaster
Order: Diptera
|
Wolbachia infection affects differential gene expression in Drosophila testis.Genes involved in carbohydrate metabolism, lysosomal degradation, proteolysis, lipid metabolism, and immune response were upregulated in the presence of Wolbachia
|
0.05% |
14.9
|
|
Wolbachia
Host Order Match
|
RISB1408 |
Anastrepha fraterculus
Order: Diptera
|
Wolbachia is the only known reproductive symbiont present in these morphotypes. Wolbachia reduced the ability for embryonic development in crosses involving cured females and infected males within each morphotype (uni-directional CI).
|
0.05% |
14.7
|
|
Acetobacter
Host Order Match
|
RISB0961 |
Drosophila melanogaster
Order: Diptera
|
The exist of Acetobacter had a balancing effect on food ingestion when carbohydrate levels were high in the warmer months, stabilizing fitness components of flies across the year.
|
0.00% |
13.6
|
|
Shewanella
Host Order Match
|
RISB1924 |
Anopheles gambiae
Order: Diptera
|
may be related with mediating adaptation to different ecological niches or in shaping specific adult behaviors including mating
|
0.14% |
12.7
|
|
Vagococcus
Host Order Match
|
RISB0042 |
Aldrichina grahami
Order: Diptera
|
None
|
2.65% |
12.7
|
|
Acetobacter
Host Order Match
|
RISB0184 |
Drosophila melanogaster
Order: Diptera
|
enhancing the brain levels of tyrosine decarboxylase 2 (Tdc2), which is an enzyme that synthesizes octopamine (OA)
|
0.00% |
12.3
|
|
Alcaligenes
Host Order Match
|
RISB1871 |
Aedes aegypti
Order: Diptera
|
gut microbiome
|
0.14% |
10.4
|
|
Escherichia coli
Species-level Match
|
RISB1339 |
Manduca sexta
Order: Lepidoptera
|
modulate immunity-related gene expression in the infected F0 larvae, and also in their offspring, triggered immune responses in the infected host associated with shifts in both DNA methylation and histone acetylation
|
1.00% |
10.3
|
|
Myroides
Host Order Match
|
RISB0626 |
Musca altica
Order: Diptera
|
None
|
0.18% |
10.2
|
|
Staphylococcus gallinarum
Species-level Match
|
RISB0945 |
Callosobruchus maculatus
Order: Coleoptera
|
The strain encodes complete biosynthetic pathways for the production of B vitamins and amino acids, including tyrosine; A carbohydrate-active enzyme search revealed that the genome codes for a number of digestive enzymes, reflecting the nutritional ecology of C. maculatus
|
0.01% |
10.0
|
|
Pectobacterium
Host Order Match
|
RISB1772 |
Muscidae
Order: Diptera
|
None
|
0.01% |
10.0
|
|
Pantoea agglomerans
Species-level Match
|
RISB2197 |
Termitidae
Order: Blattodea
|
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases that are secreted by gut microbiota to digest the structural and recalcitrant lignocellulosic residues in their foods.
|
0.00% |
10.0
|
|
Buchnera aphidicola
Species-level Match
|
RISB0236 |
Acyrthosiphon pisum
Order: Hemiptera
|
Buchnera the nutritional endosymbiont of A. pisum is located inside of bacteriocytes and requires aspartate from the aphid host, because it cannot make it de novo. Further Buchnera needs aspartate for the biosynthesis of the essential amino acids lysine and threonine, which the aphid and Buchnera require for survival
|
0.00% |
10.0
|
|
Pseudomonas fulva
Species-level Match
|
RISB0088 |
Bombyx mori
Order: Lepidoptera
|
Pseudomonas fulva ZJU1 can degrade and utilize the mulberry-derived secondary metabolite, 1-deoxynojirimycin (DNJ) as the sole energy source, and after inoculation into nonspecialists, P. fulva ZJU1 increased host resistance to DNJ and significantly promoted growth
|
0.00% |
10.0
|
|
Variovorax
Host Order Match
|
RISB1712 |
Phlebotomus papatasi
Order: Diptera
|
None
|
0.00% |
10.0
|
|
Pseudomonas sp. SGAir0191
Species-level Match
|
RISB1622 |
Dendroctonus valens
Order: Coleoptera
|
volatiles from predominant bacteria regulate the consumption sequence of carbon sources d-pinitol and d-glucose in the fungal symbiont Leptographium procerum, and appear to alleviate the antagonistic effect from the fungus against RTB larvae
|
0.01% |
9.8
|
|
Buchnera aphidicola
Species-level Match
|
RISB2485 |
Macrosiphum euphorbiae
Order: Hemiptera
|
symbiont expression patterns differ between aphid clones with differing levels of virulence, and are influenced by the aphids' host plant. Potentially, symbionts may contribute to differential adaptation of aphids to host plant resistance
|
0.00% |
9.8
|
|
Pseudomonas fulva
Species-level Match
|
RISB1510 |
Hypothenemus hampei
Order: Coleoptera
|
Antibiotic-treated larvae showed lower caffeine-degrading activity and increased mortality. These deficients were recovered by inoculation of the caffeine-degrading symbiont. A caffeine-degrading gene was detected from the symbiont
|
0.00% |
9.6
|
|
Clostridium sp. M62/1
Species-level Match
|
RISB2301 |
Pyrrhocoris apterus
Order: Hemiptera
|
could play an important role for the insect by degrading complex dietary components, providing nutrient supplementation, or detoxifying noxious chemicals (e.g. cyclopropenoic fatty acids or gossypol) in the diet
|
0.00% |
9.2
|
|
Pantoea ananatis
Species-level Match
|
RISB1671 |
Spodoptera frugiperda
Order: Lepidoptera
|
modulate plant defense, downregulated the activity of the plant defensive proteins polyphenol oxidase and trypsin proteinase inhibitors (trypsin PI) but upregulated peroxidase (POX) activity in tomatoresponses
|
0.00% |
9.2
|
|
Mammaliicoccus sciuri
Species-level Match
|
RISB0075 |
Bombyx mori
Order: Lepidoptera
|
could produce a secreted chitinolytic lysozyme (termed Msp1) to damage fungal cell walls,completely inhibit the spore germination of fungal entomopathogens Metarhizium robertsii and Beauveria bassiana
|
0.02% |
9.0
|
|
Staphylococcus xylosus
Species-level Match
|
RISB2497 |
Anticarsia gemmatalis
Order: Lepidoptera
|
allow the adaptation of this insect to plants rich in protease inhibitors, minimizing the potentially harmful consequences of protease inhibitors from some of this insect host plants, such as soybean
|
0.00% |
9.0
|
|
Streptomyces sp. NBC_01324
Species-level Match
|
RISB0943 |
Polybia plebeja
Order: Hymenoptera
|
this bacterium produces antimicrobial compounds that are active against Hirsutella citriformis, a natural fungal enemy of its host, and the human pathogens Staphylococcus aureus and Candida albicans
|
0.01% |
9.0
|
|
Streptomyces sp. SJL17-4
Species-level Match
|
RISB0943 |
Polybia plebeja
Order: Hymenoptera
|
this bacterium produces antimicrobial compounds that are active against Hirsutella citriformis, a natural fungal enemy of its host, and the human pathogens Staphylococcus aureus and Candida albicans
|
0.00% |
9.0
|
|
Weissella cibaria
Species-level Match
|
RISB1982 |
Blattella germanica
Order: Blattodea
|
gut microbiota contributes to production of VCAs that act as fecal aggregation agents and that cockroaches discriminate among the complex odors that emanate from a diverse microbial community
|
0.00% |
8.8
|
|
Escherichia coli
Species-level Match
|
RISB0128 |
Tribolium castaneum
Order: Coleoptera
|
may produce 4,8-dimethyldecanal (DMD) production that is strongly associated with attraction to females and host pheromone communication
|
1.00% |
8.7
|
|
Streptomyces sp. NBC_01324
Species-level Match
|
RISB2334 |
Sirex noctilio
Order: Hymenoptera
|
degrading woody substrates and that such degradation may assist in nutrient acquisition by S. noctilio, thus contributing to its ability to be established in forested habitats worldwide
|
0.01% |
8.7
|
|
Raoultella sp. X13
Species-level Match
|
RISB2226 |
Leptinotarsa decemlineata
Order: Coleoptera
|
Colorado potato beetle (Leptinotarsa decemlineata) larvae exploit bacteria in their oral secretions to suppress antiherbivore defenses in tomato (Solanum lycopersicum)
|
0.06% |
8.4
|
|
Sphingobacterium sp. PCS056
Species-level Match
|
RISB2227 |
Leptinotarsa decemlineata
Order: Coleoptera
|
Colorado potato beetle (Leptinotarsa decemlineata) larvae exploit bacteria in their oral secretions to suppress antiherbivore defenses in tomato (Solanum lycopersicum)
|
0.00% |
8.3
|
|
Proteus vulgaris
Species-level Match
|
RISB0001 |
Leptinotarsa decemlineata
Order: Coleoptera
|
produces toxic hydrogen cyanide (HCN) and a mandelonitrile-producing cyanoglucoside, amygdalin, which protect the insect from predation
|
0.18% |
7.9
|
|
Weissella cibaria
Species-level Match
|
RISB0641 |
Formica
Order: Hymenoptera
|
exhibited abilities in catabolizing sugars (sucrose, trehalose, melezitose and raffinose) known to be constituents of hemipteran honeydew
|
0.00% |
7.7
|
|
Carnobacterium maltaromaticum
Species-level Match
|
RISB1693 |
Plutella xylostella
Order: Lepidoptera
|
play an important role in the breakdown of plant cell walls, detoxification of plant phenolics, and synthesis of amino acids.
|
0.04% |
7.5
|
|
Staphylococcus gallinarum
Species-level Match
|
RISB0946 |
Callosobruchus maculatus
Order: Coleoptera
|
The strain encodes complete biosynthetic pathways for the production of B vitamins and amino acids, including tyrosine
|
0.01% |
7.4
|
|
Leclercia adecarboxylata
Species-level Match
|
RISB1757 |
Spodoptera frugiperda
Order: Lepidoptera
|
degradation of lambda-cyhalothrin, deltamethrin, chlorpyrifos ethyl, lufenuron and spinosyn
|
0.24% |
7.1
|
|
Corynebacterium variabile
Species-level Match
|
RISB0363 |
Pagiophloeus tsushimanus
Order: Coleoptera
|
terpenoid-degrading: the highest degradation rates of D-camphor, linalool, and eucalyptol
|
0.05% |
6.8
|
|
Carnobacterium maltaromaticum
Species-level Match
|
RISB1692 |
Plutella xylostella
Order: Lepidoptera
|
participate in the synthesis of host lacking amino acids histidine and threonine
|
0.04% |
6.6
|
|
Kosakonia sp. CCTCC M2018092
Species-level Match
|
RISB0810 |
Hypothenemus hampei
Order: Coleoptera
|
might contribute to caffeine breakdown using the C-16 oxidation pathway
|
0.07% |
6.5
|
|
Kosakonia sp. SMBL-WEM22
Species-level Match
|
RISB0810 |
Hypothenemus hampei
Order: Coleoptera
|
might contribute to caffeine breakdown using the C-16 oxidation pathway
|
0.01% |
6.4
|
|
Kosakonia sp. BYX6
Species-level Match
|
RISB0810 |
Hypothenemus hampei
Order: Coleoptera
|
might contribute to caffeine breakdown using the C-16 oxidation pathway
|
0.00% |
6.4
|
|
Leclercia adecarboxylata
Species-level Match
|
RISB1758 |
Spodoptera frugiperda
Order: Lepidoptera
|
may influence the metabolization of pesticides in insects
|
0.24% |
6.4
|
|
Glutamicibacter halophytocola
Species-level Match
|
RISB0606 |
Phthorimaea operculella
Order: Lepidoptera
|
could degrade the major toxic α-solanine and α-chaconine in potatoes
|
0.00% |
6.4
|
|
Aeromonas sp. CU5
Species-level Match
|
RISB2456 |
Bombyx mori
Order: Lepidoptera
|
able to utilize the CMcellulose and xylan
|
0.00% |
5.8
|
|
Carnobacterium maltaromaticum
Species-level Match
|
RISB1691 |
Plutella xylostella
Order: Lepidoptera
|
activity of cellulose and hemicellulose
|
0.04% |
5.8
|
|
Aeromonas sp. CU5
Species-level Match
|
RISB1145 |
Tenebrio molitor
Order: Coleoptera
|
degrading plastics
|
0.00% |
5.4
|
|
Pseudocitrobacter corydidari
Species-level Match
|
RISB0696 |
Corydidarum magnifica
Order: Blattodea
|
None
|
0.15% |
5.2
|
|
Salmonella enterica
Species-level Match
|
RISB0413 |
Melanaphis sacchari
Order: Hemiptera
|
None
|
0.15% |
5.2
|
|
Yersinia massiliensis
Species-level Match
|
RISB0407 |
Anaphes nitens
Order: Hymenoptera
|
None
|
0.09% |
5.1
|
|
Cedecea lapagei
Species-level Match
|
RISB0504 |
Plutella xylostella
Order: Lepidoptera
|
None
|
0.00% |
5.0
|
|
Candidatus Cardinium
|
RISB0223 |
Bemisia tabaci
Order: Hemiptera
|
Cardinium could inhibit the defense response of the host plant and decrease the detoxification metabolism ability of the host whitefly, decrease the expression of detoxification metabolism genes, especially the uridine 5'-diphospho-glucuronyltransferase and P450 genes,
|
0.00% |
5.0
|
|
Candidatus Erwinia haradaeae
Species-level Match
|
RISB1632 |
Lachninae
Order: Hemiptera
|
None
|
0.00% |
5.0
|
|
Trabulsiella
|
RISB2201 |
Termitidae
Order: Blattodea
|
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases that are secreted by gut microbiota to digest the structural and recalcitrant lignocellulosic residues in their foods.
|
0.00% |
5.0
|
|
Bifidobacterium
|
RISB0174 |
Apis mellifera
Order: Hymenoptera
|
Bifidobacterium provides complementary demethylation service to promote Gilliamella growth on methylated homogalacturonan, an enriched polysaccharide of pectin. In exchange, Gilliamella shares digestive products with Bifidobacterium, through which a positive interaction is established
|
0.00% |
5.0
|
|
Treponema
|
RISB2377 |
termite
Order: Blattodea
|
when grown together, two termite-gut Treponema species influence each other's gene expression in a far more comprehensive and nuanced manner than might have been predicted based on the results of previous studies on the respective pure cultures
|
0.00% |
4.9
|
|
Bifidobacterium
|
RISB0616 |
Spodoptera frugiperda
Order: Lepidoptera
|
Strain wkB204 grew in the presence of amygdalin as the sole carbon source, suggesting that this strain degrades amygdalin and is not susceptible to the potential byproducts
|
0.00% |
3.4
|
|
Pectobacterium
|
RISB1889 |
Pseudococcus longispinus
Order: Hemiptera
|
a nested symbiotic arrangement, where one bacterium lives inside another bacterium,occurred in building the mosaic metabolic pathways seen in mitochondria and plastids
|
0.01% |
3.4
|
|
Symbiopectobacterium
|
RISB1889 |
Pseudococcus longispinus
Order: Hemiptera
|
a nested symbiotic arrangement, where one bacterium lives inside another bacterium,occurred in building the mosaic metabolic pathways seen in mitochondria and plastids
|
0.00% |
3.3
|
|
Vibrio
|
RISB1810 |
Monochamus galloprovincialis
Order: Coleoptera
|
Have the ability for degradation of cellulose, proteins and starch
|
1.77% |
3.1
|
|
Yokenella
|
RISB1492 |
Nezara viridula
Order: Hemiptera
|
help stinkbugs to feed on soybean developing seeds in spite of its chemical defenses by degrading isoflavonoids and deactivate soybean protease inhibitors
|
0.00% |
3.1
|
|
Kluyvera
|
RISB1064 |
Oryctes rhinoceros
Order: Coleoptera
|
gut microbe
|
2.09% |
2.3
|
|
Bacteroides
|
RISB0256 |
Leptocybe invasa
Order: Hymenoptera
|
Differences in Male-Killing Rickettsia Bacteria between Lineages of the Invasive Gall-Causing Pest Leptocybe invasa
|
0.01% |
2.3
|
|
Candidatus Cardinium
|
RISB2290 |
Sogatella furcifera
Order: Hemiptera
|
dual infection with Cardinium and Wolbachia induced strong cytoplasmic incompatibility (CI) in a single host
|
0.00% |
2.2
|
|
Bacteroides
|
RISB0090 |
Hyphantria cunea
Order: Lepidoptera
|
enhance the compatibility of invasive pests to new hosts and enable more rapid adaptation to new habitats.
|
0.01% |
2.1
|
|
Blautia
|
RISB0091 |
Hyphantria cunea
Order: Lepidoptera
|
enhance the compatibility of invasive pests to new hosts and enable more rapid adaptation to new habitats.
|
0.00% |
2.1
|
|
Bacteroides
|
RISB1183 |
Oryzaephilus surinamensis
Order: Coleoptera
|
supplement precursors for the cuticle synthesis and thereby enhance desiccation resistance of its host
|
0.01% |
2.1
|
|
Streptococcus
|
RISB2625 |
Galleria mellonella
Order: Lepidoptera
|
suppress bacteria ingested with food by producing bacteriocin and by releasing a lysozyme like enzyme
|
0.01% |
2.0
|
|
Streptococcus
|
RISB2624 |
Reticulitermes flavipes
Order: Blattodea
|
can be broken down into substances such as carbon dioxide, ammonia and acetic acid
|
0.01% |
1.7
|
|
Leuconostoc
|
RISB0812 |
Hypothenemus hampei
Order: Coleoptera
|
might contribute to caffeine breakdown using the C-18 oxidation pathway
|
0.02% |
1.4
|
|
Variovorax
|
RISB2153 |
Osmia bicornis
Order: Hymenoptera
|
may be essential to support Osmia larvae in their nutrient uptake
|
0.00% |
1.3
|
|
Streptococcus
|
RISB2604 |
Homona magnanima
Order: Lepidoptera
|
influence the growth of Bacillus thuringiensis in the larvae
|
0.01% |
1.2
|
|
Pectobacterium
|
RISB0798 |
Pseudoregma bambucicola
Order: Hemiptera
|
may help P. bambucicola feed on the stalks of bamboo
|
0.01% |
1.1
|
|
Dickeya
|
RISB1086 |
Rhodnius prolixus
Order: Hemiptera
|
supply enzymatic biosynthesis of B-complex vitamins
|
0.00% |
1.0
|
|
Cronobacter
|
RISB0247 |
Tenebrio molitor
Order: Coleoptera
|
may be indirectly involved in the digestion of PE
|
0.03% |
1.0
|
|
Brevibacterium
|
RISB0464 |
Acrida cinerea
Order: Orthoptera
|
correlated with the hemicellulose digestibility
|
0.00% |
0.9
|
|
Brevibacterium
|
RISB2359 |
Bombyx mori
Order: Lepidoptera
|
producing lipase in a gut environment
|
0.00% |
0.8
|
|
Trabulsiella
|
RISB1685 |
Melolontha hippocastani
Order: Coleoptera
|
Involved in cellulose degradation
|
0.00% |
0.7
|
|
Flavobacterium
|
RISB0659 |
Melanaphis bambusae
Order: Hemiptera
|
None
|
0.01% |
0.0
|
|
Bifidobacterium
|
RISB1944 |
Apis cerana
Order: Hymenoptera
|
None
|
0.00% |
0.0
|
|
Treponema
|
RISB0169 |
Reticulitermes flaviceps
Order: Blattodea
|
None
|
0.00% |
0.0
|
|
Brevibacterium
|
RISB0897 |
Myzus persicae
Order: Hemiptera
|
None
|
0.00% |
0.0
|
|
Neisseria
|
RISB0512 |
Plutella xylostella
Order: Lepidoptera
|
None
|
0.00% |
0.0
|
Download Files
Taxonomic Analysis Files
Assembly & Gene Prediction
Raw Sequencing Files
Direct download from NCBI SRARaw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.