SRR23272044 - Eurosta solidaginis
Basic Information
Run: SRR23272044
Assay Type: WGS
Bioproject: PRJNA929258
Biosample: SAMN32954224
Bytes: 9786017045
Center Name: SAN FRANCISCO STATE UNIVERSITY
Sequencing Information
Instrument: Sequel II
Library Layout: SINGLE
Library Selection: RANDOM
Platform: PACBIO_SMRT
Quality Control Information
Filter Percentage: -
QC Average Length: -
Retained Reads: -
Geographic Information
Country: USA
Continent: North America
Location Name: USA: Cowling Arboretum\, Carelton College\, Northfield\, MN
Latitude/Longitude: -
Sample Information
Host: Eurosta solidaginis
Isolation: galls on Solidago altissima
Biosample Model: Model organism or animal
Collection Date: Nov-24
Taxonomic Classification
Taxonomic visualization Not Available
The interactive Krona chart for this metagenome is currently being processed or unavailable for metagenome quality reason. Please check back later or download the raw files below.
Potential Symbionts
About Potential Symbionts
This table shows potential symbiont identified in the metagenome sample. Matches are scored based on:
- Relative abundance in the sample
- Species-level matches with known symbionts
- Host insect order matches with reference records
- Completeness and richness of functional records
Based on our current records database, this section aims to identify potential functional symbionts in this metagenome sample, with scoring based on:
- Relative abundance in sample
- Species-level matches with known symbionts
- Host insect order matches
- Functional record completeness
Note: Showing top 3 highest scoring records for each species/genus
| Symbiont Name | Record | Host Species | Function | Abundance |
Score
Score Composition:
Higher scores indicate stronger symbiotic relationship potential |
|---|
Download Files
Taxonomic Analysis Files
Assembly & Gene Prediction
Raw Sequencing Files
Direct download from NCBI SRARaw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.