SRR21195516 - Aedes albopictus

Basic Information

Run: SRR21195516

Assay Type: WGS

Bioproject: PRJNA873190

Biosample: SAMN30491024

Bytes: 30624430

Center Name: PEST CONTROL DEPARTMENT

Sequencing Information

Instrument: Illumina HiSeq 2500

Library Layout: PAIRED

Library Selection: PCR

Platform: ILLUMINA

Geographic Information

Country: China

Continent: Asia

Location Name: China:Beijing

Latitude/Longitude: 39.54 N 116.25 E

Sample Information

Host: Aedes albopictus

Isolation: Sequence of the internal microbiota in Aedes albopictus after exposure to cis-permethrin

Biosample Model: Metagenome or environmental

Collection Date: 2022-05-18

Taxonomic Classification

Potential Symbionts

About Potential Symbionts

This table shows potential symbiont identified in the metagenome sample. Matches are scored based on:

Relative abundance in the sample
Species-level matches with known symbionts
Host insect order matches with reference records
Completeness and richness of functional records

Note: only the three highest scoring comparison records were retained for each symbiont species or genus in the sample

Based on our current records database, this section aims to identify potential functional symbionts in this metagenome sample, with scoring based on:

Relative abundance in sample
Species-level matches with known symbionts
Host insect order matches
Functional record completeness

Note: Showing top 3 highest scoring records for each species/genus

Symbiont Name	Record	Host Species	Function	Abundance	Score Score Composition: Symbiont Abundance Species match bonus Host match bonus Function richness Higher scores indicate stronger symbiotic relationship potential
Wolbachia pipientis Species-level Match Host Order Match Host Species Match	RISB2617	Aedes albopictus Order: Diptera	induces cytoplasmic incompatibility	1.53%	37.2
Wolbachia pipientis Species-level Match Host Order Match Host Species Match	RISB1965	Aedes albopictus Order: Diptera	None	1.53%	36.5
Wolbachia pipientis Species-level Match Host Order Match	RISB0766	Aedes fluviatilis Order: Diptera	The presence of Wolbachia pipientis improves energy performance in A. fluviatilis cells; it affects the regulation of key energy sources such as lipids, proteins, and carbohydrates, making the distribution of actin more peripheral and with extensions that come into contact with neighboring cells.	1.53%	21.5
Escherichia coli Species-level Match Host Order Match	RISB1769	Calliphoridae Order: Diptera	None	4.43%	19.4
Brevundimonas sp. M20 Species-level Match Host Order Match	RISB1703	Phlebotomus papatasi Order: Diptera	None	1.85%	16.9
Brevundimonas sp. Bb-A Species-level Match Host Order Match	RISB1703	Phlebotomus papatasi Order: Diptera	None	0.48%	15.5
Asaia Host Order Match	RISB0854	Anopheles stephensi Order: Diptera	Two complete operons encoding cytochrome bo3-type ubiquinol terminal oxidases (cyoABCD-1 and cyoABCD-2) were found in most Asaia genomes, possibly offering alternative terminal oxidases and allowing the flexible transition of respiratory pathways. Genes involved in the production of 2,3-butandiol and inositol have been found in Asaia sp. W12, possibly contributing to biofilm formation and stress tolerance.	0.15%	15.2
Citrobacter Host Order Match	RISB1503	Bactrocera dorsalis Order: Diptera	Pesticide-degrading bacteria were frequently detected from pesticide-resistant insects. Susceptible insects became resistant after inoculation of the pesticide-degrading symbiont	0.31%	13.9
Escherichia coli Species-level Match	RISB1339	Manduca sexta Order: Lepidoptera	modulate immunity-related gene expression in the infected F0 larvae, and also in their offspring, triggered immune responses in the infected host associated with shifts in both DNA methylation and histone acetylation	4.43%	13.8
Citrobacter Host Order Match	RISB0192	Hermetia illucens Order: Diptera	can directly promote the expression of two gene families related to intestinal protein metabolism: Hitryp serine protease trypsin family and Himtp metallopeptidase family	0.31%	13.7
Asaia Host Order Match	RISB0014	Aedes aegypti Order: Diptera	The bacterium Asaia is considered a highly promising candidate for arboviral control in Aedes mosquitoes.Asaia could play a role in inhibiting CHIKV within Ae. aegypti.	0.15%	13.5
Asaia Host Order Match	RISB2533	Anopheles stephensi Order: Diptera	Asaia sp. strain effectively lodged in the female gut and salivary glands, sites that are crucial for Plasmodium sp. development and transmission	0.15%	13.1
Citrobacter Host Order Match	RISB1221	Delia antiqua Order: Diptera	six bacteria protect larvae from infection with the entomopathogen Beauveria bassiana through symbiotic bacterium-derived organic acids	0.31%	13.0
Escherichia coli Species-level Match	RISB0128	Tribolium castaneum Order: Coleoptera	may produce 4,8-dimethyldecanal (DMD) production that is strongly associated with attraction to females and host pheromone communication	4.43%	12.2
Microbacterium Host Order Match	RISB2095	Aedes aegypti Order: Diptera	axenic larvae cannot develop	0.28%	10.8
Streptomyces Host Order Match	RISB0962	Drosophila melanogaster Order: Diptera	None	0.16%	10.2
Methylovirgula	RISB0137	Coccinella septempunctata Order: Coleoptera	Methylovirgula is ubiquitous in soil and has been found in many soil samples as a major species producing carbon activity, scholars have found that the microorganism has the highest content in mixed peat swamp forest systems and has the effect of harnessing and reducing methane	1.84%	6.8
Methylobacterium sp. FF17 Species-level Match	RISB2053	Atractomorpha sinensis Order: Orthoptera	associated with cellulolytic enzymes	0.65%	6.4
Cupriavidus pauculus Species-level Match	RISB0694	Alydus tomentosus Order: Hemiptera	None	0.63%	5.6
Streptomyces	RISB0334	Philanthus triangulum Order: Hymenoptera	S. philanthi protect the offspring from opportunistic pathogens by producing antibiotics ,the beewolf protects S. philanthi from oxidative and nitrosative damage by producing protective enzymes and embalming the symbiont in a secretion containing long-chain hydrocarbons	0.16%	5.2
Microbacterium	RISB0084	Osmia cornifrons Order: Hymenoptera	In O. cornifrons larvae, Microbacterium could contribute to the balance and resiliency of the gut microbiome under stress conditions. In addition, Rhodococcus was found in O. cornifrons larvae and is known for its detoxification capabilities	0.28%	5.1
Formicincola oecophyllae Species-level Match	RISB0578	Oecophylla smaragdina Order: Hymenoptera	None	0.07%	5.1
Streptomyces	RISB2316	Philanthinus quattuordecimpunctatus Order: Hymenoptera	host cultivate the actinomycete in specialized antennal gland reservoirs. Then symbionts are transferred to the larval cocoon, where they provide protection against pathogenic fungi by producing at least nine different antibiotics.	0.16%	4.8
Sphingomonas	RISB0420	Aphis gossypii Order: Hemiptera	Sphingomonas could mediate A. gossypii resistance to imidacloprid by hydroxylation and nitroreduction	1.92%	3.9
Pseudonocardia	RISB0947	Acromyrmex Order: Hymenoptera	Pseudonocardia in the Acromyrmex leaf-cutter ants as a protective partner against the entomopathogenic fungus Metarhizium	1.51%	3.9
Sphingomonas	RISB1307	Aphis gossypii Order: Hemiptera	have been previously described in associations with phloem-feeding insects, in low abundances	1.92%	3.8
Pseudonocardia	RISB1218	Mycocepurus smithii Order: Hymenoptera	produce secondary metabolites with antibiotic activity that protects the fungus garden against pathogens	1.51%	3.6
Sphingomonas	RISB0134	Spodoptera frugiperda Order: Lepidoptera	provide a protective effect to against chlorantraniliprole stress to S. frugiperda	1.92%	3.6
Microbacterium	RISB2274	Ostrinia nubilalis Order: Lepidoptera	extreme cellulolytic enzymes, at extreme (pH 13) conditions, exhibited cellulolytic properties	0.28%	2.2
Nocardioides	RISB1914	Hyles euphorbiae Order: Lepidoptera	able to degrade alkaloids and/or latex	0.98%	1.7
Paraburkholderia	RISB0125	Physopelta gutta Order: Hemiptera	None	0.96%	1.0
Acidobacterium	RISB1136	Coptotermes Order: Blattodea	None	0.22%	0.2