SRR21195502 - Aedes albopictus

Basic Information

Run: SRR21195502

Assay Type: WGS

Bioproject: PRJNA873190

Biosample: SAMN30491037

Bytes: 25405195

Center Name: PEST CONTROL DEPARTMENT

Sequencing Information

Instrument: Illumina HiSeq 2500

Library Layout: PAIRED

Library Selection: PCR

Platform: ILLUMINA

Geographic Information

Country: China

Continent: Asia

Location Name: China:Beijing

Latitude/Longitude: 39.54 N 116.25 E

Sample Information

Host: Aedes albopictus

Isolation: Sequence of the internal microbiota in Aedes albopictus after exposure to cis-permethrin

Biosample Model: Metagenome or environmental

Collection Date: 2022-05-18

Taxonomic Classification

Potential Symbionts

About Potential Symbionts

This table shows potential symbiont identified in the metagenome sample. Matches are scored based on:

Relative abundance in the sample
Species-level matches with known symbionts
Host insect order matches with reference records
Completeness and richness of functional records

Note: only the three highest scoring comparison records were retained for each symbiont species or genus in the sample

Based on our current records database, this section aims to identify potential functional symbionts in this metagenome sample, with scoring based on:

Relative abundance in sample
Species-level matches with known symbionts
Host insect order matches
Functional record completeness

Note: Showing top 3 highest scoring records for each species/genus

Symbiont Name	Record	Host Species	Function	Abundance	Score Score Composition: Symbiont Abundance Species match bonus Host match bonus Function richness Higher scores indicate stronger symbiotic relationship potential
Escherichia coli Species-level Match Host Order Match	RISB1769	Calliphoridae Order: Diptera	None	40.92%	55.9
Escherichia coli Species-level Match	RISB1339	Manduca sexta Order: Lepidoptera	modulate immunity-related gene expression in the infected F0 larvae, and also in their offspring, triggered immune responses in the infected host associated with shifts in both DNA methylation and histone acetylation	40.92%	50.2
Escherichia coli Species-level Match	RISB0128	Tribolium castaneum Order: Coleoptera	may produce 4,8-dimethyldecanal (DMD) production that is strongly associated with attraction to females and host pheromone communication	40.92%	48.6
Wolbachia Host Order Match Host Species Match	RISB0957	Aedes albopictus Order: Diptera	antibiotics induced histopathological damage and reactive oxygen species production in the ovaries	7.40%	39.4
Wolbachia Host Order Match Host Species Match	RISB2323	Aedes albopictus Order: Diptera	induces cytoplasmic incompatibility and blocks dengue transmission in Aedes albopictus	7.40%	39.1
Wolbachia Host Order Match Host Species Match	RISB2617	Aedes albopictus Order: Diptera	induces cytoplasmic incompatibility	7.40%	38.1
Streptomyces sp. WAC00303 Species-level Match	RISB0943	Polybia plebeja Order: Hymenoptera	this bacterium produces antimicrobial compounds that are active against Hirsutella citriformis, a natural fungal enemy of its host, and the human pathogens Staphylococcus aureus and Candida albicans	0.27%	9.2
Streptomyces sp. WAC00303 Species-level Match	RISB2334	Sirex noctilio Order: Hymenoptera	degrading woody substrates and that such degradation may assist in nutrient acquisition by S. noctilio, thus contributing to its ability to be established in forested habitats worldwide	0.27%	9.0
Bacteroides	RISB0256	Leptocybe invasa Order: Hymenoptera	Differences in Male-Killing Rickettsia Bacteria between Lineages of the Invasive Gall-Causing Pest Leptocybe invasa	5.95%	8.3
Bacteroides	RISB0090	Hyphantria cunea Order: Lepidoptera	enhance the compatibility of invasive pests to new hosts and enable more rapid adaptation to new habitats.	5.95%	8.1
Bacteroides	RISB1183	Oryzaephilus surinamensis Order: Coleoptera	supplement precursors for the cuticle synthesis and thereby enhance desiccation resistance of its host	5.95%	8.0
Streptomyces sp. WAC00303 Species-level Match	RISB1134	mud dauber wasp Order: Hymenoptera	secondary metabolites derived from a Streptomyces sp. displayed significant inhibitory activity against hexokinase II	0.27%	7.6
Blautia	RISB0091	Hyphantria cunea Order: Lepidoptera	enhance the compatibility of invasive pests to new hosts and enable more rapid adaptation to new habitats.	0.60%	2.7
Mycobacterium	RISB1156	Nicrophorus concolor Order: Coleoptera	produces Antimicrobial compounds	0.26%	0.9