SRR19201387 - Lyctus africanus

Basic Information

Run: SRR19201387

Assay Type: WGS

Bioproject: PRJNA836854

Biosample: SAMN28175361

Bytes: 3650826590

Center Name: JOHANNES GUTENBERG-UNIVERSITY MAINZ

Sequencing Information

Instrument: Illumina HiSeq 3000

Library Layout: PAIRED

Library Selection: RANDOM

Platform: ILLUMINA

Geographic Information

Country: Japan

Continent: Asia

Location Name: Japan: Tokyo

Latitude/Longitude: -

Sample Information

Host: Lyctus africanus

Isolation: beetle abdomen

Biosample Model: Metagenome or environmental

Collection Date: 2016-03-18

Taxonomic Classification

Potential Symbionts

Based on our current records database, this section aims to identify potential functional symbionts in this metagenome sample, with scoring based on:

  • Relative abundance in sample
  • Species-level matches with known symbionts
  • Host insect order matches
  • Functional record completeness

Note: Showing top 3 highest scoring records for each species/genus

Symbiont Name Record Host Species Function Abundance
Score
Escherichia coli
RISB0128
Tribolium castaneum
Order: Coleoptera
may produce 4,8-dimethyldecanal (DMD) production that is strongly associated with attraction to females and host pheromone communication
4.82%
22.5
Pseudomonas sp. NC02
RISB1622
Dendroctonus valens
Order: Coleoptera
volatiles from predominant bacteria regulate the consumption sequence of carbon sources d-pinitol and d-glucose in the fungal symbiont Leptographium procerum, and appear to alleviate the antagonistic effect from the fungus against RTB larvae
2.62%
22.4
Aeromonas
RISB1145
Tenebrio molitor
Order: Coleoptera
degrading plastics
11.85%
22.2
Pseudomonas sp. Colony2
RISB1622
Dendroctonus valens
Order: Coleoptera
volatiles from predominant bacteria regulate the consumption sequence of carbon sources d-pinitol and d-glucose in the fungal symbiont Leptographium procerum, and appear to alleviate the antagonistic effect from the fungus against RTB larvae
2.33%
22.2
Pseudomonas sp. NC02
RISB2224
Leptinotarsa decemlineata
Order: Coleoptera
Colorado potato beetle (Leptinotarsa decemlineata) larvae exploit bacteria in their oral secretions to suppress antiherbivore defenses in tomato (Solanum lycopersicum)
2.62%
21.0
Acinetobacter sp. TTH0-4
RISB0730
Curculio chinensis
Order: Coleoptera
Acinetobacter sp. in C. chinensis enriched after treating with saponin, and when incubating bacteria with saponin for 72 h, saponin content significantly decreased from 4.054 to 1.867 mg/mL (by 16S rRNA metagenome sequencing and HPLC)
0.13%
19.8
Lactococcus lactis
RISB0967
Oulema melanopus
Order: Coleoptera
contribute to the decomposition of complex carbohydrates, fatty acids, or polysaccharides in the insect gut. It might also contribute to the improvement of nutrient availability.
0.28%
18.8
Sphingobacterium sp. ML3W
RISB2227
Leptinotarsa decemlineata
Order: Coleoptera
Colorado potato beetle (Leptinotarsa decemlineata) larvae exploit bacteria in their oral secretions to suppress antiherbivore defenses in tomato (Solanum lycopersicum)
0.09%
18.4
Sphingobacterium sp. WM
RISB2227
Leptinotarsa decemlineata
Order: Coleoptera
Colorado potato beetle (Leptinotarsa decemlineata) larvae exploit bacteria in their oral secretions to suppress antiherbivore defenses in tomato (Solanum lycopersicum)
0.06%
18.4
Bacillus cereus
RISB1056
Oryctes rhinoceros
Order: Coleoptera
provide symbiotic digestive functions to Oryctes
2.32%
18.3
Bacillus cereus
RISB1778
Lissorhoptrus oryzophilus
Order: Coleoptera
might be promising paratransgenesis candidates
2.32%
18.2
Morganella morganii
RISB1867
Costelytra zealandica
Order: Coleoptera
Female beetles were previously shown to use phenol as their sex pheromone produced by symbiotic bacteria in the accessory or colleterial gland
0.06%
17.9
Enterococcus faecalis
RISB0497
Cryptolestes ferrugineus
Order: Coleoptera
bacteria can degrade malathion, pirimiphos-methyl, and deltamethrin and utilize these insecticides as the carbon source in vitro.
0.30%
17.9
Bacillus sp. JAS24-2
RISB1645
Osphranteria coerulescens
Order: Coleoptera
The isolate has cellulolytic activity and can hydrolyze CMC, avicel, cellulose and sawdust with broad temperature and pH stability
0.27%
17.9
Proteus vulgaris
RISB0001
Leptinotarsa decemlineata
Order: Coleoptera
produces toxic hydrogen cyanide (HCN) and a mandelonitrile-producing cyanoglucoside, amygdalin, which protect the insect from predation
0.13%
17.8
Klebsiella pneumoniae
RISB1153
Tenebrio molitor
Order: Coleoptera
degrading plastics
2.41%
17.8
Enterococcus faecalis
RISB2042
Harpalus pensylvanicus
Order: Coleoptera
E. faecalis facilitate seed consumption by H. pensylvanicus, possibly by contributing digestive enzymes to their host
0.30%
17.6
Wolbachia
RISB1452
Octodonta nipae
Order: Coleoptera
Wolbachia harbored dominantly in a female than the male adult, while, no significant differences were observed between male and female body parts and tissues
4.50%
17.6
Streptomyces sp. GS7
RISB0777
Copris tripartitus
Order: Coleoptera
contribute brood ball hygiene by inhibiting fungal parasites in the environment
0.85%
17.4
Acinetobacter sp. TTH0-4
RISB0706
Curculio chinensis
Order: Coleoptera
facilitate the degradation of tea saponin; genome contains 47 genes relating to triterpenoids degradation
0.13%
17.2
Lactococcus lactis
RISB1430
Rhynchophorus ferrugineus
Order: Coleoptera
promote the development and body mass gain of RPW larvae by improving their nutrition metabolism
0.28%
17.2
Streptomyces sp. T12
RISB0777
Copris tripartitus
Order: Coleoptera
contribute brood ball hygiene by inhibiting fungal parasites in the environment
0.42%
17.0
Wolbachia
RISB2107
Sitophilus zeamais
Order: Coleoptera
Wolbachia directly favored weevil fertility and exhibited only mild indirect effects, usually enhancing the SZPE effect
4.50%
16.9
Morganella morganii
RISB1548
Costelytra zealandica
Order: Coleoptera
symbionts residing in the colleterial glands produce phenol 1 as the female sex pheromone
0.06%
16.8
Morganella morganii
RISB1868
Costelytra zealandica
Order: Coleoptera
produces phenol as the sex pheromone of the host from tyrosine in the colleterial gland
0.06%
16.8
Enterococcus faecalis
RISB0374
Tribolium castaneum
Order: Coleoptera
modulates host phosphine resistance by interfering with the redox system
0.30%
16.7
Paenibacillus sp. FSL R7-0189
RISB0813
Hypothenemus hampei
Order: Coleoptera
might contribute to caffeine breakdown using the C-9 oxidation pathway
0.27%
16.7
Streptomyces sp. TLI_053
RISB0777
Copris tripartitus
Order: Coleoptera
contribute brood ball hygiene by inhibiting fungal parasites in the environment
0.05%
16.6
Paenibacillus sp. JNUCC-31
RISB0813
Hypothenemus hampei
Order: Coleoptera
might contribute to caffeine breakdown using the C-9 oxidation pathway
0.20%
16.6
Acinetobacter sp. TTH0-4
RISB0804
Hypothenemus hampei
Order: Coleoptera
might contribute to caffeine breakdown using the C-11 oxidation pathway
0.13%
16.6
Stenotrophomonas maltophilia
RISB0139
Tenebrio molitor
Order: Coleoptera
correlated with polyvinyl chloride PVC degradation
0.49%
16.5
Wolbachia
RISB1282
Ips sp.
Order: Coleoptera
inducing cytoplasmic incompatibility, resulting in reproductive distortions and hence
4.50%
16.2
Lactococcus lactis
RISB1065
Oryctes rhinoceros
Order: Coleoptera
gut microbe
0.28%
15.5
Lysinibacillus fusiformis
RISB1066
Oryctes rhinoceros
Order: Coleoptera
gut microbe
0.27%
15.5
Staphylococcus hominis
RISB1071
Oryctes rhinoceros
Order: Coleoptera
gut microbe
0.18%
15.4
Staphylococcus epidermidis
RISB1070
Oryctes rhinoceros
Order: Coleoptera
gut microbe
0.17%
15.4
Escherichia coli
RISB1339
Manduca sexta
Order: Lepidoptera
modulate immunity-related gene expression in the infected F0 larvae, and also in their offspring, triggered immune responses in the infected host associated with shifts in both DNA methylation and histone acetylation
4.82%
14.1
Spiroplasma
RISB0343
Harmonia axyridis
Order: Coleoptera
female ladybirds co-infected with Hesperomyces harmoniae and Spiroplasma had a significantly lower fecundity and hatchability compared to females with only one or no symbiont
0.33%
13.8
Raoultella
RISB2226
Leptinotarsa decemlineata
Order: Coleoptera
Colorado potato beetle (Leptinotarsa decemlineata) larvae exploit bacteria in their oral secretions to suppress antiherbivore defenses in tomato (Solanum lycopersicum)
0.08%
13.4
Bacteroides
RISB1183
Oryzaephilus surinamensis
Order: Coleoptera
supplement precursors for the cuticle synthesis and thereby enhance desiccation resistance of its host
0.77%
12.8
Spiroplasma
RISB1483
Brachinus elongatulus
Order: Coleoptera
may manipulate host reproduction (e.g., cause male-killing) or provide resistance to nematodes and/or parasitoid wasps
0.33%
12.7
Aeromonas
RISB2456
Bombyx mori
Order: Lepidoptera
able to utilize the CMcellulose and xylan
11.85%
12.7
Vibrio
RISB1810
Monochamus galloprovincialis
Order: Coleoptera
Have the ability for degradation of cellulose, proteins and starch
1.15%
12.5
Aeromonas
RISB2086
Aedes aegypti
Order: Diptera
axenic larvae cannot develop
11.85%
12.4
Klebsiella pneumoniae
RISB2185
Scirpophaga incertulas
Order: Lepidoptera
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases that are secreted by gut microbiota to digest the structural and recalcitrant lignocellulosic residues in their foods.
2.41%
12.4
Rickettsia
RISB1279
Ips sp.
Order: Coleoptera
inducing cytoplasmic incompatibility, resulting in reproductive distortions and hence
0.23%
11.9
Nostoc
RISB0812
Hypothenemus hampei
Order: Coleoptera
might contribute to caffeine breakdown using the C-18 oxidation pathway
0.50%
11.9
Rickettsia
RISB0970
Oulema melanopus
Order: Coleoptera
may be associated with insect reproduction and maturation of their sexual organs
0.23%
11.8
Corynebacterium
RISB0363
Pagiophloeus tsushimanus
Order: Coleoptera
terpenoid-degrading: the highest degradation rates of D-camphor, linalool, and eucalyptol
0.05%
11.8
Rickettsia
RISB1954
Sitona obsoletus
Order: Coleoptera
potential defensive properties against he parasitoid Microctonus aethiopoides
0.23%
11.8
Raoultella
RISB1007
Monochamus alternatus
Order: Coleoptera
may help M. alternatus degrade cellulose and pinene
0.08%
11.1
Spiroplasma
RISB0250
Tenebrio molitor
Order: Coleoptera
associated with PE biodegradation
0.33%
11.0
Buchnera aphidicola
RISB0236
Acyrthosiphon pisum
Order: Hemiptera
Buchnera the nutritional endosymbiont of A. pisum is located inside of bacteriocytes and requires aspartate from the aphid host, because it cannot make it de novo. Further Buchnera needs aspartate for the biosynthesis of the essential amino acids lysine and threonine, which the aphid and Buchnera require for survival
0.76%
10.8
Escherichia coli
RISB2120
Galleria mellonella
Order: Lepidoptera
mediate trans-generational immune priming
4.82%
10.6
Buchnera aphidicola
RISB2485
Macrosiphum euphorbiae
Order: Hemiptera
symbiont expression patterns differ between aphid clones with differing levels of virulence, and are influenced by the aphids' host plant. Potentially, symbionts may contribute to differential adaptation of aphids to host plant resistance
0.76%
10.5
Paenibacillus polymyxa
RISB2195
Termitidae
Order: Blattodea
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases that are secreted by gut microbiota to digest the structural and recalcitrant lignocellulosic residues in their foods.
0.12%
10.1
Listeria monocytogenes
RISB2308
Drosophila melanogaster
Order: Diptera
L. monocytogenes infection disrupts host energy metabolism by depleting energy stores (triglycerides and glycogen) and reducing metabolic pathway activity (beta-oxidation and glycolysis). The infection affects antioxidant defense by reducing uric acid levels and alters amino acid metabolism. These metabolic changes are accompanied by melanization, potentially linked to decreased tyrosine levels.
0.07%
10.1
Buchnera aphidicola
RISB0685
Acyrthosiphon pisum
Order: Hemiptera
It supplies the host with vitamins and essential amino acids, such as arginine and methionine that aphids cannot synthesize or derive insufficiently from their diet, the phloem sap of plants
0.76%
9.6
Stenotrophomonas maltophilia
RISB1122
Bombyx mori
Order: Lepidoptera
facilitate host resistance against organophosphate insecticides, provides essential amino acids that increase host fitness and allow the larvae to better tolerate the toxic effects of the insecticide.
0.49%
9.5
Clostridium sp. DL-VIII
RISB2301
Pyrrhocoris apterus
Order: Hemiptera
could play an important role for the insect by degrading complex dietary components, providing nutrient supplementation, or detoxifying noxious chemicals (e.g. cyclopropenoic fatty acids or gossypol) in the diet
0.23%
9.5
Blattabacterium cuenoti
RISB0133
Panesthiinae
Order: Blattodea
enables hosts to subsist on a nutrient-poor diet; endosymbiont genome erosions are associated with repeated host transitions to an underground life
1.43%
9.4
Clostridium sp. MB40-C1
RISB2301
Pyrrhocoris apterus
Order: Hemiptera
could play an important role for the insect by degrading complex dietary components, providing nutrient supplementation, or detoxifying noxious chemicals (e.g. cyclopropenoic fatty acids or gossypol) in the diet
0.10%
9.3
Clostridium sp. AWRP
RISB2301
Pyrrhocoris apterus
Order: Hemiptera
could play an important role for the insect by degrading complex dietary components, providing nutrient supplementation, or detoxifying noxious chemicals (e.g. cyclopropenoic fatty acids or gossypol) in the diet
0.09%
9.3
Mammaliicoccus sciuri
RISB0075
Bombyx mori
Order: Lepidoptera
could produce a secreted chitinolytic lysozyme (termed Msp1) to damage fungal cell walls,completely inhibit the spore germination of fungal entomopathogens Metarhizium robertsii and Beauveria bassiana
0.14%
9.1
Lactobacillus sp. wkB8
RISB0292
Lymantria dispar asiatica
Order: Lepidoptera
Beauveria bassiana infection-based assays showed that the mortality of non-axenic L. dispar asiatica larvae was significantly higher than that of axenic larvae at 72 h.
0.08%
8.4
Klebsiella pneumoniae
RISB2459
Bombyx mori
Order: Lepidoptera
degradation of cellulose, xylan, pectin and starch
2.41%
8.4
Stenotrophomonas maltophilia
RISB1227
Delia antiqua
Order: Diptera
six bacteria protect larvae from infection with the entomopathogen Beauveria bassiana through symbiotic bacterium-derived organic acids
0.49%
8.2
Blattabacterium cuenoti
RISB0518
Cryptocercus punctulatus
Order: Blattodea
collaborative arginine biosynthesis
1.43%
7.1
Blattabacterium cuenoti
RISB0093
Blattella germanica
Order: Blattodea
obligate endosymbiont
1.43%
6.9
Frischella perrara
RISB2028
Diceroprocta semicincta
Order: Hemiptera
causes the formation of a scab-like structure on the gut epithelium of its host
0.05%
6.6
Lysinibacillus fusiformis
RISB1417
Psammotermes hypostoma
Order: Blattodea
isolates showed significant cellulolytic activity
0.27%
6.3
Salmonella enterica
RISB0413
Melanaphis sacchari
Order: Hemiptera
None
1.17%
6.2
Staphylococcus sp. IVB6181
RISB0029
Sesamia inferens
Order: Lepidoptera
degrade Chlorpyrifos and Chlorantraniliprole in vitro
0.09%
6.2
Proteus vulgaris
RISB2460
Bombyx mori
Order: Lepidoptera
degradation of cellulose, xylan, pectin and starch
0.13%
6.1
Providencia rettgeri
RISB1001
Anastrepha obliqua
Order: Diptera
improve the sexual competitiveness of males
0.18%
6.0
Enterobacter hormaechei
RISB1331
Zeugodacus cucurbitae
Order: Diptera
None
0.84%
5.8
Providencia rettgeri
RISB1169
Bactrocera dorsalis
Order: Diptera
Promote the growth of larvae
0.18%
5.7
Chryseobacterium sp. MYb264
RISB2092
Aedes aegypti
Order: Diptera
axenic larvae cannot develop
0.11%
5.7
Providencia alcalifaciens
RISB1168
Bactrocera dorsalis
Order: Diptera
Promote the growth of larvae
0.07%
5.6
Arsenophonus nasoniae
RISB0428
Nasonia vitripennis
Order: Hymenoptera
male killing
0.11%
5.4
Candidatus Karelsulcia muelleri
RISB1591
Philaenus spumarius
Order: Hemiptera
None
0.31%
5.3
Flavobacterium johnsoniae
RISB0659
Melanaphis bambusae
Order: Hemiptera
None
0.15%
5.2
Candidatus Erwinia haradaeae
RISB1632
Lachninae
Order: Hemiptera
None
0.13%
5.1
Arsenophonus nasoniae
RISB0366
Pachycrepoideus vindemmiae
Order: Hymenoptera
None
0.11%
5.1
Gilliamella
RISB0102
Apis mellifera
Order: Hymenoptera
Gilliamella apicola carries the gene for the desaturase FADS2, which is able to metabolize polyunsaturated fatty acids from pollen and synthesize endocannabinoid, a lipogenic neuroactive substance, thereby modulating reward learning and memory in honeybees.
0.06%
5.1
Treponema
RISB2377
termite
Order: Blattodea
when grown together, two termite-gut Treponema species influence each other's gene expression in a far more comprehensive and nuanced manner than might have been predicted based on the results of previous studies on the respective pure cultures
0.12%
5.0
Apibacter
RISB0603
Apis cerana
Order: Hymenoptera
The acquisition of genes for the degradation of the toxic monosaccharides potentiates Apibacter with the ability to utilize the pollen hydrolysis products, at the same time enabling monosaccharide detoxification for the host
0.04%
4.5
Xanthomonas
RISB0498
Xylocopa appendiculata
Order: Hymenoptera
Xanthomonas strain from Japanese carpenter bee is effective PU-degradable bacterium and is able to use polyacryl-based PU as a nutritional source, as well as other types of PS-PU and PE-PU
0.62%
4.4
Weissella
RISB1982
Blattella germanica
Order: Blattodea
gut microbiota contributes to production of VCAs that act as fecal aggregation agents and that cockroaches discriminate among the complex odors that emanate from a diverse microbial community
0.08%
3.9
Photorhabdus
RISB2532
Manduca sexta
Order: Lepidoptera
produces a small-molecule antibiotic (E)-1,3-dihydroxy-2-(isopropyl)-5-(2-phenylethenyl)benzene (ST) that also acts as an inhibitor of phenoloxidase (PO) in the insect host Manduca sexta.
0.07%
3.8
Candidatus Blochmanniella
RISB2542
Camponotus
Order: Hymenoptera
Blochmannia provide essential amino acids to its host,Camponotus floridanus, and that it may also play a role in nitrogen recycling via its functional urease
0.06%
3.2
Candidatus Blochmanniella
RISB1827
Camponotus floridanus
Order: Hymenoptera
a modulation of immune gene expression which may facilitate tolerance towards the endosymbionts and thus may contribute to their transovarial transmission
0.06%
3.1
Bacteroides
RISB0256
Leptocybe invasa
Order: Hymenoptera
Differences in Male-Killing Rickettsia Bacteria between Lineages of the Invasive Gall-Causing Pest Leptocybe invasa
0.77%
3.1
Bacteroides
RISB0090
Hyphantria cunea
Order: Lepidoptera
enhance the compatibility of invasive pests to new hosts and enable more rapid adaptation to new habitats.
0.77%
2.9
Photorhabdus
RISB2573
Manduca sexta
Order: Lepidoptera
the bacteria are symbiotic with entomopathogenic nematodes but become pathogenic on release from the nematode into the insect blood system
0.07%
2.8
Weissella
RISB0641
Formica
Order: Hymenoptera
exhibited abilities in catabolizing sugars (sucrose, trehalose, melezitose and raffinose) known to be constituents of hemipteran honeydew
0.08%
2.8
Candidatus Blochmanniella
RISB2448
Camponotus floridanus
Order: Hymenoptera
nutritional contribution of the bacteria to host metabolism by production of essential amino acids and urease-mediated nitrogen recycling
0.06%
2.8
Streptococcus
RISB2625
Galleria mellonella
Order: Lepidoptera
suppress bacteria ingested with food by producing bacteriocin and by releasing a lysozyme like enzyme
0.68%
2.7
Xanthomonas
RISB0217
Xylocopa appendiculata
Order: Hymenoptera
strains biodegraded polyethylene terephthalate PET powder, broke it into its degradation products
0.62%
2.6
Streptococcus
RISB2624
Reticulitermes flavipes
Order: Blattodea
can be broken down into substances such as carbon dioxide, ammonia and acetic acid
0.68%
2.3
Liberibacter
RISB2310
Bactericerca cockerelli
Order: Hemiptera
manipulate plant signaling and defensive responses, suppress accumulation of defense transcripts like JA and SA
0.05%
2.3
Streptococcus
RISB2604
Homona magnanima
Order: Lepidoptera
influence the growth of Bacillus thuringiensis in the larvae
0.68%
1.9
Corynebacterium
RISB0531
Helicoverpa armigera
Order: Lepidoptera
Corynebacterium sp. 2-TD, mediates the toxicity of the 2-tridecanone to H. armigera
0.05%
1.7
Liberibacter
RISB2524
Bactericera cockerelli
Order: Hemiptera
Reduced expression of plant defensive gene in tomato probably for psyllid success
0.05%
1.7
Raoultella
RISB1672
Spodoptera frugiperda
Order: Lepidoptera
downregulated POX but upregulated trypsin PI in this plant species
0.08%
1.4
Paraclostridium
RISB0028
Sesamia inferens
Order: Lepidoptera
degrade Chlorpyrifos and Chlorantraniliprole in vitro
0.29%
1.4
Photorhabdus
RISB0532
Drosophila melanogaster
Order: Diptera
produces toxin complex (Tc) toxins as major virulence factors
0.07%
1.3
Peribacillus
RISB1877
Aedes aegypti
Order: Diptera
gut microbiome
0.86%
1.1
Dickeya
RISB1086
Rhodnius prolixus
Order: Hemiptera
supply enzymatic biosynthesis of B-complex vitamins
0.06%
1.1
Liberibacter
RISB2333
Cacopsylla pyri
Order: Hemiptera
behaves as an endophyte rather than a pathogen
0.05%
1.0
Priestia
RISB0839
Helicoverpa armigera
Order: Lepidoptera
producing amylase
0.57%
0.9
Corynebacterium
RISB2360
Bombyx mori
Order: Lepidoptera
producing lipase in a gut environment
0.05%
0.8
Alcaligenes
RISB1871
Aedes aegypti
Order: Diptera
gut microbiome
0.13%
0.4
Gilliamella
RISB0620
Spodoptera frugiperda
Order: Lepidoptera
degrade amygdalin
0.06%
0.4
Myroides
RISB0626
Musca altica
Order: Diptera
None
0.36%
0.4
Helicobacter
RISB0662
Melanaphis bambusae
Order: Hemiptera
None
0.26%
0.3
Sediminibacterium
RISB0244
Spodoptera frugiperda
Order: Lepidoptera
None
0.23%
0.2
Cupriavidus
RISB0694
Alydus tomentosus
Order: Hemiptera
None
0.22%
0.2
Vagococcus
RISB0042
Aldrichina grahami
Order: Diptera
None
0.13%
0.1
Treponema
RISB0169
Reticulitermes flaviceps
Order: Blattodea
None
0.12%
0.1
Legionella
RISB1687
Polyplax serrata
Order: Phthiraptera
None
0.09%
0.1
Weissella
RISB1566
Liometopum apiculatum
Order: Hymenoptera
None
0.08%
0.1
Candidatus Profftia
RISB1664
Adelgidae
Order: Hemiptera
None
0.08%
0.1
Gilliamella
RISB1945
Apis cerana
Order: Hymenoptera
None
0.06%
0.1
Apibacter
RISB0604
Apis cerana
Order: Hymenoptera
None
0.04%
0.0

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Taxonomic Analysis Files

Kraken Report

Detailed taxonomic classification

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Krona HTML

Interactive taxonomic visualization

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Bracken Results

Species abundance estimation

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Assembly & Gene Prediction

Assembled Contigs

MEGAHIT assembly results

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Predicted Genes

Gene sequences (FASTA)

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Gene Annotation

GFF format annotation

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Genome Binning

MetaBAT2 Bins

Compressed genome bins

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Bin Information

Quality metrics and statistics

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR19201387
3.4 GB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

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