SRR19201385 - Dinoderus porcellus
Basic Information
Run: SRR19201385
Assay Type: WGS
Bioproject: PRJNA836854
Biosample: SAMN28175366
Bytes: 12606553354
Center Name: JOHANNES GUTENBERG-UNIVERSITY MAINZ
Sequencing Information
Instrument: Sequel II
Library Layout: SINGLE
Library Selection: RANDOM
Platform: PACBIO_SMRT
Geographic Information
Country: Germany
Continent: Europe
Location Name: Germany: Berlin
Latitude/Longitude: -
Sample Information
Host: Dinoderus porcellus
Isolation: beetle abdomen
Biosample Model: Metagenome or environmental
Collection Date: 2014
Taxonomic Classification
Potential Symbionts
About Potential Symbionts
This table shows potential symbiont identified in the metagenome sample. Matches are scored based on:
- Relative abundance in the sample
- Species-level matches with known symbionts
- Host insect order matches with reference records
- Completeness and richness of functional records
Based on our current records database, this section aims to identify potential functional symbionts in this metagenome sample, with scoring based on:
- Relative abundance in sample
- Species-level matches with known symbionts
- Host insect order matches
- Functional record completeness
Note: Showing top 3 highest scoring records for each species/genus
Symbiont Name | Record | Host Species | Function | Abundance |
Score
Score Composition:
Higher scores indicate stronger symbiotic relationship potential |
---|---|---|---|---|---|
Escherichia coli
Species-level Match
Host Order Match
|
RISB0128 |
Tribolium castaneum
Order: Coleoptera
|
may produce 4,8-dimethyldecanal (DMD) production that is strongly associated with attraction to females and host pheromone communication
|
5.62% |
23.3
|
Acinetobacter sp. YH12068_T
Species-level Match
Host Order Match
|
RISB0730 |
Curculio chinensis
Order: Coleoptera
|
Acinetobacter sp. in C. chinensis enriched after treating with saponin, and when incubating bacteria with saponin for 72 h, saponin content significantly decreased from 4.054 to 1.867 mg/mL (by 16S rRNA metagenome sequencing and HPLC)
|
0.37% |
20.1
|
Burkholderia gladioli
Species-level Match
Host Order Match
|
RISB1172 |
Lagria villosa
Order: Coleoptera
|
process a cryptic gene cluster that codes for the biosynthesis of a novel antifungal polyketide with a glutarimide pharmacophore, which led to the discovery of the gladiofungins as previously-overlooked components of the antimicrobial armory of the beetle symbiont
|
0.03% |
20.0
|
Staphylococcus gallinarum
Species-level Match
Host Order Match
|
RISB0945 |
Callosobruchus maculatus
Order: Coleoptera
|
The strain encodes complete biosynthetic pathways for the production of B vitamins and amino acids, including tyrosine; A carbohydrate-active enzyme search revealed that the genome codes for a number of digestive enzymes, reflecting the nutritional ecology of C. maculatus
|
0.02% |
20.0
|
Serratia sp. 3ACOL1
Species-level Match
Host Order Match
|
RISB0308 |
Rhopalotria slossonae
Order: Coleoptera
|
suggesting the occurrence of an unprecedented desferrioxamine-like biosynthetic pathway,including desferrioxamine B, which may help tolerating diets rich in azoxyglycosides, BMAA, and other cycad toxins, including a possible role for bacterial siderophores
|
0.02% |
20.0
|
Pseudomonas sp. Seg1
Species-level Match
Host Order Match
|
RISB1622 |
Dendroctonus valens
Order: Coleoptera
|
volatiles from predominant bacteria regulate the consumption sequence of carbon sources d-pinitol and d-glucose in the fungal symbiont Leptographium procerum, and appear to alleviate the antagonistic effect from the fungus against RTB larvae
|
0.08% |
19.9
|
Pseudomonas sp. SC3(2021)
Species-level Match
Host Order Match
|
RISB1622 |
Dendroctonus valens
Order: Coleoptera
|
volatiles from predominant bacteria regulate the consumption sequence of carbon sources d-pinitol and d-glucose in the fungal symbiont Leptographium procerum, and appear to alleviate the antagonistic effect from the fungus against RTB larvae
|
0.05% |
19.9
|
Pseudomonas sp. B21-047
Species-level Match
Host Order Match
|
RISB1622 |
Dendroctonus valens
Order: Coleoptera
|
volatiles from predominant bacteria regulate the consumption sequence of carbon sources d-pinitol and d-glucose in the fungal symbiont Leptographium procerum, and appear to alleviate the antagonistic effect from the fungus against RTB larvae
|
0.04% |
19.9
|
Acinetobacter sp. NCu2D-2
Species-level Match
Host Order Match
|
RISB0730 |
Curculio chinensis
Order: Coleoptera
|
Acinetobacter sp. in C. chinensis enriched after treating with saponin, and when incubating bacteria with saponin for 72 h, saponin content significantly decreased from 4.054 to 1.867 mg/mL (by 16S rRNA metagenome sequencing and HPLC)
|
0.05% |
19.7
|
Acinetobacter sp. TTH0-4
Species-level Match
Host Order Match
|
RISB0730 |
Curculio chinensis
Order: Coleoptera
|
Acinetobacter sp. in C. chinensis enriched after treating with saponin, and when incubating bacteria with saponin for 72 h, saponin content significantly decreased from 4.054 to 1.867 mg/mL (by 16S rRNA metagenome sequencing and HPLC)
|
0.04% |
19.7
|
Bacillus subtilis
Species-level Match
Host Order Match
|
RISB0494 |
Sitophilus oryzae
Order: Coleoptera
|
bacteria can degrade malathion, pirimiphos-methyl, and deltamethrin and utilize these insecticides as the carbon source in vitro.
|
2.11% |
19.7
|
Bacillus cereus
Species-level Match
Host Order Match
|
RISB1056 |
Oryctes rhinoceros
Order: Coleoptera
|
provide symbiotic digestive functions to Oryctes
|
3.53% |
19.5
|
Bacillus cereus
Species-level Match
Host Order Match
|
RISB1778 |
Lissorhoptrus oryzophilus
Order: Coleoptera
|
might be promising paratransgenesis candidates
|
3.53% |
19.5
|
Burkholderia gladioli
Species-level Match
Host Order Match
|
RISB1729 |
Lagria hirta
Order: Coleoptera
|
the symbionts inhibit the growth of antagonistic fungi on the eggs of the insect host, indicating that the Lagria-associated Burkholderia have evolved from plant pathogenic ancestors into insect defensive mutualists
|
0.03% |
19.3
|
Lactococcus lactis
Species-level Match
Host Order Match
|
RISB0967 |
Oulema melanopus
Order: Coleoptera
|
contribute to the decomposition of complex carbohydrates, fatty acids, or polysaccharides in the insect gut. It might also contribute to the improvement of nutrient availability.
|
0.47% |
19.0
|
Burkholderia gladioli
Species-level Match
Host Order Match
|
RISB1604 |
Lagria villosa
Order: Coleoptera
|
Bacteria produce icosalide, an unusual two-tailed lipocyclopeptide antibiotic,which is active against entomopathogenic bacteria, thus adding to the chemical armory protecting beetle offspring
|
0.03% |
18.9
|
Sphingobacterium sp. LZ7M1
Species-level Match
Host Order Match
|
RISB2227 |
Leptinotarsa decemlineata
Order: Coleoptera
|
Colorado potato beetle (Leptinotarsa decemlineata) larvae exploit bacteria in their oral secretions to suppress antiherbivore defenses in tomato (Solanum lycopersicum)
|
0.08% |
18.4
|
Sphingobacterium sp. UDSM-2020
Species-level Match
Host Order Match
|
RISB2227 |
Leptinotarsa decemlineata
Order: Coleoptera
|
Colorado potato beetle (Leptinotarsa decemlineata) larvae exploit bacteria in their oral secretions to suppress antiherbivore defenses in tomato (Solanum lycopersicum)
|
0.06% |
18.4
|
Sphingobacterium sp. DR205
Species-level Match
Host Order Match
|
RISB2227 |
Leptinotarsa decemlineata
Order: Coleoptera
|
Colorado potato beetle (Leptinotarsa decemlineata) larvae exploit bacteria in their oral secretions to suppress antiherbivore defenses in tomato (Solanum lycopersicum)
|
0.02% |
18.4
|
Citrobacter freundii
Species-level Match
Host Order Match
|
RISB0517 |
Leptinotarsa decemlineata
Order: Coleoptera
|
affect the cellular and humoral immunity of the insect, increasing its susceptibility to Bacillus thuringiensis var. tenebrionis (morrisoni) (Bt)
|
0.27% |
18.2
|
Klebsiella pneumoniae
Species-level Match
Host Order Match
|
RISB1153 |
Tenebrio molitor
Order: Coleoptera
|
degrading plastics
|
2.74% |
18.1
|
Morganella morganii
Species-level Match
Host Order Match
|
RISB1867 |
Costelytra zealandica
Order: Coleoptera
|
Female beetles were previously shown to use phenol as their sex pheromone produced by symbiotic bacteria in the accessory or colleterial gland
|
0.22% |
18.1
|
Citrobacter freundii
Species-level Match
Host Order Match
|
RISB0127 |
Tribolium castaneum
Order: Coleoptera
|
may produce 4,8-dimethyldecanal (DMD) production that is strongly associated with attraction to females and host pheromone communication
|
0.27% |
18.0
|
Enterococcus faecalis
Species-level Match
Host Order Match
|
RISB0497 |
Cryptolestes ferrugineus
Order: Coleoptera
|
bacteria can degrade malathion, pirimiphos-methyl, and deltamethrin and utilize these insecticides as the carbon source in vitro.
|
0.29% |
17.9
|
Proteus vulgaris
Species-level Match
Host Order Match
|
RISB0001 |
Leptinotarsa decemlineata
Order: Coleoptera
|
produces toxic hydrogen cyanide (HCN) and a mandelonitrile-producing cyanoglucoside, amygdalin, which protect the insect from predation
|
0.10% |
17.8
|
Enterococcus faecalis
Species-level Match
Host Order Match
|
RISB2042 |
Harpalus pensylvanicus
Order: Coleoptera
|
E. faecalis facilitate seed consumption by H. pensylvanicus, possibly by contributing digestive enzymes to their host
|
0.29% |
17.6
|
Streptomyces sp. T12
Species-level Match
Host Order Match
|
RISB0777 |
Copris tripartitus
Order: Coleoptera
|
contribute brood ball hygiene by inhibiting fungal parasites in the environment
|
0.82% |
17.4
|
Lactococcus lactis
Species-level Match
Host Order Match
|
RISB1430 |
Rhynchophorus ferrugineus
Order: Coleoptera
|
promote the development and body mass gain of RPW larvae by improving their nutrition metabolism
|
0.47% |
17.4
|
Staphylococcus gallinarum
Species-level Match
Host Order Match
|
RISB0946 |
Callosobruchus maculatus
Order: Coleoptera
|
The strain encodes complete biosynthetic pathways for the production of B vitamins and amino acids, including tyrosine
|
0.02% |
17.4
|
Serratia marcescens
Species-level Match
Host Order Match
|
RISB1295 |
Nicrophorus vespilloides
Order: Coleoptera
|
producing antibacterial compound Serrawettin W2, which has antibacterial and nematode-inhibiting effects
|
0.07% |
17.2
|
Morganella morganii
Species-level Match
Host Order Match
|
RISB1548 |
Costelytra zealandica
Order: Coleoptera
|
symbionts residing in the colleterial glands produce phenol 1 as the female sex pheromone
|
0.22% |
17.0
|
Morganella morganii
Species-level Match
Host Order Match
|
RISB1868 |
Costelytra zealandica
Order: Coleoptera
|
produces phenol as the sex pheromone of the host from tyrosine in the colleterial gland
|
0.22% |
17.0
|
Serratia marcescens
Species-level Match
Host Order Match
|
RISB0365 |
Pagiophloeus tsushimanus
Order: Coleoptera
|
terpenoid-degrading: the highest degradation rates of D-camphor, linalool, and eucalyptol
|
0.07% |
16.9
|
Paludibacter propionicigenes
Species-level Match
Host Order Match
|
RISB2055 |
Odontotaenius disjunctus
Order: Coleoptera
|
microbial fixation of nitrogen that is important for this beetle to subsist on woody biomass
|
0.01% |
16.9
|
Enterococcus faecalis
Species-level Match
Host Order Match
|
RISB0374 |
Tribolium castaneum
Order: Coleoptera
|
modulates host phosphine resistance by interfering with the redox system
|
0.29% |
16.7
|
Streptomyces sp. WAC00303
Species-level Match
Host Order Match
|
RISB0777 |
Copris tripartitus
Order: Coleoptera
|
contribute brood ball hygiene by inhibiting fungal parasites in the environment
|
0.04% |
16.6
|
Streptomyces sp. 3214.6
Species-level Match
Host Order Match
|
RISB0777 |
Copris tripartitus
Order: Coleoptera
|
contribute brood ball hygiene by inhibiting fungal parasites in the environment
|
0.02% |
16.6
|
Paenibacillus sp. IHBB 10380
Species-level Match
Host Order Match
|
RISB0813 |
Hypothenemus hampei
Order: Coleoptera
|
might contribute to caffeine breakdown using the C-9 oxidation pathway
|
0.16% |
16.6
|
Paenibacillus sp. FSL W7-1088
Species-level Match
Host Order Match
|
RISB0813 |
Hypothenemus hampei
Order: Coleoptera
|
might contribute to caffeine breakdown using the C-9 oxidation pathway
|
0.07% |
16.5
|
Erwinia sp. E602
Species-level Match
Host Order Match
|
RISB0808 |
Hypothenemus hampei
Order: Coleoptera
|
might contribute to caffeine breakdown using the C-12 oxidation pathway
|
0.04% |
16.5
|
Paenibacillus sp. FSL R5-0766
Species-level Match
Host Order Match
|
RISB0813 |
Hypothenemus hampei
Order: Coleoptera
|
might contribute to caffeine breakdown using the C-9 oxidation pathway
|
0.05% |
16.5
|
Stenotrophomonas maltophilia
Species-level Match
Host Order Match
|
RISB0139 |
Tenebrio molitor
Order: Coleoptera
|
correlated with polyvinyl chloride PVC degradation
|
0.03% |
16.0
|
Paludibacter propionicigenes
Species-level Match
Host Order Match
|
RISB2056 |
Odontotaenius disjunctus
Order: Coleoptera
|
plays an important role in nitrogen fixation
|
0.01% |
15.9
|
Lactococcus lactis
Species-level Match
Host Order Match
|
RISB1065 |
Oryctes rhinoceros
Order: Coleoptera
|
gut microbe
|
0.47% |
15.7
|
Staphylococcus hominis
Species-level Match
Host Order Match
|
RISB1071 |
Oryctes rhinoceros
Order: Coleoptera
|
gut microbe
|
0.15% |
15.4
|
Lysinibacillus fusiformis
Species-level Match
Host Order Match
|
RISB1066 |
Oryctes rhinoceros
Order: Coleoptera
|
gut microbe
|
0.04% |
15.3
|
Pantoea agglomerans
Species-level Match
Host Order Match
|
RISB1858 |
Lissorhoptrus oryzophilus
Order: Coleoptera
|
None
|
0.02% |
15.0
|
Escherichia coli
Species-level Match
|
RISB1339 |
Manduca sexta
Order: Lepidoptera
|
modulate immunity-related gene expression in the infected F0 larvae, and also in their offspring, triggered immune responses in the infected host associated with shifts in both DNA methylation and histone acetylation
|
5.62% |
14.9
|
Wolbachia
Host Order Match
|
RISB1452 |
Octodonta nipae
Order: Coleoptera
|
Wolbachia harbored dominantly in a female than the male adult, while, no significant differences were observed between male and female body parts and tissues
|
0.07% |
13.2
|
Klebsiella pneumoniae
Species-level Match
|
RISB2185 |
Scirpophaga incertulas
Order: Lepidoptera
|
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases that are secreted by gut microbiota to digest the structural and recalcitrant lignocellulosic residues in their foods.
|
2.74% |
12.7
|
Vibrio
Host Order Match
|
RISB1810 |
Monochamus galloprovincialis
Order: Coleoptera
|
Have the ability for degradation of cellulose, proteins and starch
|
1.31% |
12.6
|
Bacteroides
Host Order Match
|
RISB1183 |
Oryzaephilus surinamensis
Order: Coleoptera
|
supplement precursors for the cuticle synthesis and thereby enhance desiccation resistance of its host
|
0.52% |
12.6
|
Wolbachia
Host Order Match
|
RISB2107 |
Sitophilus zeamais
Order: Coleoptera
|
Wolbachia directly favored weevil fertility and exhibited only mild indirect effects, usually enhancing the SZPE effect
|
0.07% |
12.5
|
Wolbachia
Host Order Match
|
RISB1282 |
Ips sp.
Order: Coleoptera
|
inducing cytoplasmic incompatibility, resulting in reproductive distortions and hence
|
0.07% |
11.8
|
Nostoc
Host Order Match
|
RISB0812 |
Hypothenemus hampei
Order: Coleoptera
|
might contribute to caffeine breakdown using the C-18 oxidation pathway
|
0.24% |
11.7
|
Bradyrhizobium
Host Order Match
|
RISB0135 |
Coccinella septempunctata
Order: Coleoptera
|
be commonly found in plant roots and they all have nitrogen fixation abilities
|
0.07% |
11.6
|
Leuconostoc
Host Order Match
|
RISB0812 |
Hypothenemus hampei
Order: Coleoptera
|
might contribute to caffeine breakdown using the C-18 oxidation pathway
|
0.09% |
11.5
|
Escherichia coli
Species-level Match
|
RISB2120 |
Galleria mellonella
Order: Lepidoptera
|
mediate trans-generational immune priming
|
5.62% |
11.4
|
Candidatus Mesenet
Host Order Match
|
RISB1785 |
Brontispa longissima
Order: Coleoptera
|
induced complete Cytoplasmic incompatibility (CI) (100% mortality)
|
0.01% |
11.3
|
Turicibacter
Host Order Match
|
RISB0451 |
Odontotaenius disjunctus
Order: Coleoptera
|
degrading ellulose and xylan
|
0.05% |
10.6
|
Aeromonas
Host Order Match
|
RISB1145 |
Tenebrio molitor
Order: Coleoptera
|
degrading plastics
|
0.21% |
10.6
|
Comamonas
Host Order Match
|
RISB1061 |
Oryctes rhinoceros
Order: Coleoptera
|
gut microbe
|
0.23% |
10.5
|
Listeria monocytogenes
Species-level Match
|
RISB2308 |
Drosophila melanogaster
Order: Diptera
|
L. monocytogenes infection disrupts host energy metabolism by depleting energy stores (triglycerides and glycogen) and reducing metabolic pathway activity (beta-oxidation and glycolysis). The infection affects antioxidant defense by reducing uric acid levels and alters amino acid metabolism. These metabolic changes are accompanied by melanization, potentially linked to decreased tyrosine levels.
|
0.44% |
10.4
|
Buchnera aphidicola
Species-level Match
|
RISB0236 |
Acyrthosiphon pisum
Order: Hemiptera
|
Buchnera the nutritional endosymbiont of A. pisum is located inside of bacteriocytes and requires aspartate from the aphid host, because it cannot make it de novo. Further Buchnera needs aspartate for the biosynthesis of the essential amino acids lysine and threonine, which the aphid and Buchnera require for survival
|
0.31% |
10.3
|
Kluyvera
Host Order Match
|
RISB1064 |
Oryctes rhinoceros
Order: Coleoptera
|
gut microbe
|
0.03% |
10.3
|
Buchnera aphidicola
Species-level Match
|
RISB2485 |
Macrosiphum euphorbiae
Order: Hemiptera
|
symbiont expression patterns differ between aphid clones with differing levels of virulence, and are influenced by the aphids' host plant. Potentially, symbionts may contribute to differential adaptation of aphids to host plant resistance
|
0.31% |
10.1
|
Francisella tularensis
Species-level Match
|
RISB1907 |
Bombyx mori
Order: Lepidoptera
|
After infection with F. tularensis, the induction of melanization and nodulation, which are immune responses to bacterial infection, were inhibited in silkworms. Pre-inoculation of silkworms with F. tularensis enhanced the expression of antimicrobial peptides and resistance to infection by pathogenic bacteria.
|
0.06% |
10.1
|
Gilliamella apicola
Species-level Match
|
RISB0102 |
Apis mellifera
Order: Hymenoptera
|
Gilliamella apicola carries the gene for the desaturase FADS2, which is able to metabolize polyunsaturated fatty acids from pollen and synthesize endocannabinoid, a lipogenic neuroactive substance, thereby modulating reward learning and memory in honeybees.
|
0.03% |
10.0
|
Micromonospora
Host Order Match
|
RISB2034 |
Harpalus sinicus
Order: Coleoptera
|
None
|
0.03% |
10.0
|
Dysgonomonas
Host Order Match
|
RISB1481 |
Brachinus elongatulus
Order: Coleoptera
|
None
|
0.03% |
10.0
|
Pantoea agglomerans
Species-level Match
|
RISB2197 |
Termitidae
Order: Blattodea
|
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases that are secreted by gut microbiota to digest the structural and recalcitrant lignocellulosic residues in their foods.
|
0.02% |
10.0
|
Candidatus Nasuia deltocephalinicola
Species-level Match
|
RISB2283 |
Nephotettix cincticeps
Order: Hemiptera
|
Oral administration of tetracycline to nymphal N. cincticeps resulted in retarded growth, high mortality rates, and failure in adult emergence, suggesting important biological roles of the symbionts for the host insect
|
0.01% |
9.4
|
Clostridium sp. C1
Species-level Match
|
RISB2301 |
Pyrrhocoris apterus
Order: Hemiptera
|
could play an important role for the insect by degrading complex dietary components, providing nutrient supplementation, or detoxifying noxious chemicals (e.g. cyclopropenoic fatty acids or gossypol) in the diet
|
0.07% |
9.3
|
Clostridium sp. OS1-26
Species-level Match
|
RISB2301 |
Pyrrhocoris apterus
Order: Hemiptera
|
could play an important role for the insect by degrading complex dietary components, providing nutrient supplementation, or detoxifying noxious chemicals (e.g. cyclopropenoic fatty acids or gossypol) in the diet
|
0.06% |
9.3
|
Clostridium sp. MB40-C1
Species-level Match
|
RISB2301 |
Pyrrhocoris apterus
Order: Hemiptera
|
could play an important role for the insect by degrading complex dietary components, providing nutrient supplementation, or detoxifying noxious chemicals (e.g. cyclopropenoic fatty acids or gossypol) in the diet
|
0.04% |
9.3
|
Mammaliicoccus sciuri
Species-level Match
|
RISB0075 |
Bombyx mori
Order: Lepidoptera
|
could produce a secreted chitinolytic lysozyme (termed Msp1) to damage fungal cell walls,completely inhibit the spore germination of fungal entomopathogens Metarhizium robertsii and Beauveria bassiana
|
0.13% |
9.1
|
Buchnera aphidicola
Species-level Match
|
RISB0685 |
Acyrthosiphon pisum
Order: Hemiptera
|
It supplies the host with vitamins and essential amino acids, such as arginine and methionine that aphids cannot synthesize or derive insufficiently from their diet, the phloem sap of plants
|
0.31% |
9.1
|
Stenotrophomonas maltophilia
Species-level Match
|
RISB1122 |
Bombyx mori
Order: Lepidoptera
|
facilitate host resistance against organophosphate insecticides, provides essential amino acids that increase host fitness and allow the larvae to better tolerate the toxic effects of the insecticide.
|
0.03% |
9.0
|
Klebsiella pneumoniae
Species-level Match
|
RISB2459 |
Bombyx mori
Order: Lepidoptera
|
degradation of cellulose, xylan, pectin and starch
|
2.74% |
8.7
|
Lactobacillus sp. ESL0680
Species-level Match
|
RISB0292 |
Lymantria dispar asiatica
Order: Lepidoptera
|
Beauveria bassiana infection-based assays showed that the mortality of non-axenic L. dispar asiatica larvae was significantly higher than that of axenic larvae at 72 h.
|
0.03% |
8.4
|
Lactobacillus sp. PV034
Species-level Match
|
RISB0292 |
Lymantria dispar asiatica
Order: Lepidoptera
|
Beauveria bassiana infection-based assays showed that the mortality of non-axenic L. dispar asiatica larvae was significantly higher than that of axenic larvae at 72 h.
|
0.02% |
8.4
|
Candidatus Gullanella endobia
Species-level Match
|
RISB1885 |
Ferrisia virgata
Order: Hemiptera
|
a nested symbiotic arrangement, where one bacterium lives inside another bacterium,occurred in building the mosaic metabolic pathways seen in mitochondria and plastids
|
0.02% |
8.4
|
Spiroplasma sp. SV19
Species-level Match
|
RISB1353 |
Cephus cinctus
Order: Hymenoptera
|
The bacterium also encoded biosynthetic pathways for essential vitamins B2, B3, and B9. We identified putative Spiroplasma virulence genes: cardiolipin and chitinase.
|
0.01% |
8.3
|
Blattabacterium cuenoti
Species-level Match
|
RISB0133 |
Panesthiinae
Order: Blattodea
|
enables hosts to subsist on a nutrient-poor diet; endosymbiont genome erosions are associated with repeated host transitions to an underground life
|
0.24% |
8.2
|
Citrobacter freundii
Species-level Match
|
RISB1221 |
Delia antiqua
Order: Diptera
|
six bacteria protect larvae from infection with the entomopathogen Beauveria bassiana through symbiotic bacterium-derived organic acids
|
0.27% |
8.0
|
Spiroplasma poulsonii
Species-level Match
|
RISB1346 |
Drosophila melanogaster
Order: Diptera
|
S. poulsonii protects its host against parasitoid wasps and nematodes by the action of toxins from the family of Ribosome Inactivating Proteins
|
0.01% |
7.9
|
Stenotrophomonas maltophilia
Species-level Match
|
RISB1227 |
Delia antiqua
Order: Diptera
|
six bacteria protect larvae from infection with the entomopathogen Beauveria bassiana through symbiotic bacterium-derived organic acids
|
0.03% |
7.7
|
Spiroplasma poulsonii
Species-level Match
|
RISB2264 |
Drosophila melanogaster
Order: Diptera
|
Spiroplasma coopts the yolk transport and uptake machinery to colonize the germ line and ensure efficient vertical transmission
|
0.01% |
7.6
|
Carnobacterium maltaromaticum
Species-level Match
|
RISB1693 |
Plutella xylostella
Order: Lepidoptera
|
play an important role in the breakdown of plant cell walls, detoxification of plant phenolics, and synthesis of amino acids.
|
0.04% |
7.5
|
Candidatus Nasuia deltocephalinicola
Species-level Match
|
RISB2282 |
Nephotettix cincticeps
Order: Hemiptera
|
With the antibiotic, nymphal growth was remarkably retarded, and a number of nymphs either died or failed to attain adulthood
|
0.01% |
7.5
|
Psychrobacter sp. DAB_AL43B
Species-level Match
|
RISB1773 |
Calliphoridae
Order: Diptera
|
it shows physiological adaptation to survival in warmer temperatures and has been previously associated with food spoilage
|
0.03% |
7.5
|
Candidatus Tachikawaea gelatinosa
Species-level Match
|
RISB2112 |
Urostylis westwoodii
Order: Hemiptera
|
the symbiont localizes to a specialized midgut region and supplies essential amino acids deficient in the host's diet
|
0.02% |
7.4
|
Candidatus Nasuia deltocephalinicola
Species-level Match
|
RISB0262 |
Maiestas dorsalis
Order: Hemiptera
|
are responsible for synthesizing two essential amino acids (histidine and methionine) and riboflavin (vitamin B2)
|
0.01% |
7.3
|
Pantoea agglomerans
Species-level Match
|
RISB2579 |
Schistocerca gregaria
Order: Orthoptera
|
produces an antifungal and antibacterial molecule serving as antimicrobial defense against gut pathogens
|
0.02% |
7.1
|
Apilactobacillus kunkeei
Species-level Match
|
RISB0475 |
Apis mellifera
Order: Hymenoptera
|
A. kunkeei alleviated acetamiprid-induced symbiotic microbiota dysregulation and mortality in honeybees
|
0.02% |
7.1
|
Snodgrassella alvi
Species-level Match
|
RISB1423 |
Bombus spp.
Order: Hymenoptera
|
The bumble bee microbiome slightly increases survivorship when the host is exposed to selenate
|
0.02% |
6.9
|
Candidatus Ishikawella capsulata
Species-level Match
|
RISB2368 |
Megacopta punctatissima
Order: Hemiptera
|
Microbe compensates for nutritional deficiency of host diet by supplying essential amino acids
|
0.01% |
6.9
|
Leclercia adecarboxylata
Species-level Match
|
RISB1757 |
Spodoptera frugiperda
Order: Lepidoptera
|
degradation of lambda-cyhalothrin, deltamethrin, chlorpyrifos ethyl, lufenuron and spinosyn
|
0.05% |
6.9
|
Sphingomonas sp. HDW15A
Species-level Match
|
RISB0134 |
Spodoptera frugiperda
Order: Lepidoptera
|
provide a protective effect to against chlorantraniliprole stress to S. frugiperda
|
0.05% |
6.7
|
Blattabacterium sp. (Cryptocercus kyebangensis)
Species-level Match
|
RISB1534 |
Periplaneta fuliginosa
Order: Blattodea
|
involved in uric acid degradation, nitrogen assimilation and nutrient provisioning
|
0.01% |
6.7
|
Carnobacterium maltaromaticum
Species-level Match
|
RISB1692 |
Plutella xylostella
Order: Lepidoptera
|
participate in the synthesis of host lacking amino acids histidine and threonine
|
0.04% |
6.6
|
Frischella perrara
Species-level Match
|
RISB2028 |
Diceroprocta semicincta
Order: Hemiptera
|
causes the formation of a scab-like structure on the gut epithelium of its host
|
0.01% |
6.6
|
Xenorhabdus bovienii
Species-level Match
|
RISB2270 |
Acyrthosiphon pisum
Order: Hemiptera
|
have the gene PIN1 encoding the protease inhibitor protein against aphids
|
0.01% |
6.5
|
Providencia rettgeri
Species-level Match
|
RISB1001 |
Anastrepha obliqua
Order: Diptera
|
improve the sexual competitiveness of males
|
0.41% |
6.3
|
Salmonella enterica
Species-level Match
|
RISB0413 |
Melanaphis sacchari
Order: Hemiptera
|
None
|
1.23% |
6.2
|
Leclercia adecarboxylata
Species-level Match
|
RISB1758 |
Spodoptera frugiperda
Order: Lepidoptera
|
may influence the metabolization of pesticides in insects
|
0.05% |
6.2
|
Lactiplantibacillus plantarum
Species-level Match
|
RISB0674 |
Drosophila melanogaster
Order: Diptera
|
could effectively inhibit fungal spore germinations
|
0.09% |
6.1
|
Proteus vulgaris
Species-level Match
|
RISB2460 |
Bombyx mori
Order: Lepidoptera
|
degradation of cellulose, xylan, pectin and starch
|
0.10% |
6.1
|
Lysinibacillus fusiformis
Species-level Match
|
RISB1417 |
Psammotermes hypostoma
Order: Blattodea
|
isolates showed significant cellulolytic activity
|
0.04% |
6.0
|
Providencia rettgeri
Species-level Match
|
RISB1169 |
Bactrocera dorsalis
Order: Diptera
|
Promote the growth of larvae
|
0.41% |
6.0
|
Blattabacterium cuenoti
Species-level Match
|
RISB0518 |
Cryptocercus punctulatus
Order: Blattodea
|
collaborative arginine biosynthesis
|
0.24% |
5.9
|
Carnobacterium maltaromaticum
Species-level Match
|
RISB1691 |
Plutella xylostella
Order: Lepidoptera
|
activity of cellulose and hemicellulose
|
0.04% |
5.8
|
Candidatus Ishikawella capsulata
Species-level Match
|
RISB2543 |
Megacopta punctatissima
Order: Hemiptera
|
Enhance pest status of the insect host
|
0.01% |
5.8
|
Erwinia sp. E602
Species-level Match
|
RISB1986 |
Bombyx mori
Order: Lepidoptera
|
producing cellulase and amylase
|
0.04% |
5.7
|
Chryseobacterium sp. MEBOG06
Species-level Match
|
RISB2092 |
Aedes aegypti
Order: Diptera
|
axenic larvae cannot develop
|
0.04% |
5.6
|
Providencia alcalifaciens
Species-level Match
|
RISB1168 |
Bactrocera dorsalis
Order: Diptera
|
Promote the growth of larvae
|
0.03% |
5.6
|
Chryseobacterium sp. Y16C
Species-level Match
|
RISB2092 |
Aedes aegypti
Order: Diptera
|
axenic larvae cannot develop
|
0.03% |
5.6
|
Chryseobacterium sp. MA9
Species-level Match
|
RISB2092 |
Aedes aegypti
Order: Diptera
|
axenic larvae cannot develop
|
0.02% |
5.6
|
Enterobacter hormaechei
Species-level Match
|
RISB1331 |
Zeugodacus cucurbitae
Order: Diptera
|
None
|
0.30% |
5.3
|
Lactiplantibacillus plantarum
Species-level Match
|
RISB0608 |
Drosophila melanogaster
Order: Diptera
|
None
|
0.09% |
5.1
|
Agrobacterium tumefaciens
Species-level Match
|
RISB0650 |
Melanaphis bambusae
Order: Hemiptera
|
None
|
0.08% |
5.1
|
Candidatus Erwinia haradaeae
Species-level Match
|
RISB1632 |
Lachninae
Order: Hemiptera
|
None
|
0.06% |
5.1
|
Flavobacterium johnsoniae
Species-level Match
|
RISB0659 |
Melanaphis bambusae
Order: Hemiptera
|
None
|
0.06% |
5.1
|
Gilliamella apicola
Species-level Match
|
RISB1945 |
Apis cerana
Order: Hymenoptera
|
None
|
0.03% |
5.0
|
Snodgrassella alvi
Species-level Match
|
RISB1947 |
Apis cerana
Order: Hymenoptera
|
None
|
0.02% |
5.0
|
Zymomonas mobilis
Species-level Match
|
RISB1326 |
Vespa mandarinia
Order: Hymenoptera
|
None
|
0.02% |
5.0
|
Candidatus Karelsulcia muelleri
Species-level Match
|
RISB1591 |
Philaenus spumarius
Order: Hemiptera
|
None
|
0.02% |
5.0
|
Arsenophonus
|
RISB1047 |
Aphis gossypii
Order: Hemiptera
|
secondary symbiont reduction led to reduction of the total life span and intrinsic rate of natural increase as well as appearance of the deformed dead offspring. H. defensa and Arsenophonus contributed to the fitness of A. gossypii by enhancing its performance, but not through parasitoid resistance.
|
0.02% |
5.0
|
Candidatus Legionella polyplacis
Species-level Match
|
RISB1687 |
Polyplax serrata
Order: Phthiraptera
|
None
|
0.01% |
5.0
|
Rickettsia canadensis
Species-level Match
|
RISB1898 |
Bemisia tabaci
Order: Hemiptera
|
None
|
0.01% |
5.0
|
Treponema
|
RISB2377 |
termite
Order: Blattodea
|
when grown together, two termite-gut Treponema species influence each other's gene expression in a far more comprehensive and nuanced manner than might have been predicted based on the results of previous studies on the respective pure cultures
|
0.10% |
5.0
|
Arsenophonus
|
RISB1300 |
Aphis gossypii
Order: Hemiptera
|
Arsenophonus sp. can have different effects on its hosts, including obligate mutualism in blood-sucking insects, improving the performance of whiteflies, or through facultative mutualism by protecting psyllids against parasitoid attacks.
|
0.02% |
4.8
|
Apibacter
|
RISB0603 |
Apis cerana
Order: Hymenoptera
|
The acquisition of genes for the degradation of the toxic monosaccharides potentiates Apibacter with the ability to utilize the pollen hydrolysis products, at the same time enabling monosaccharide detoxification for the host
|
0.03% |
4.5
|
Arsenophonus
|
RISB1334 |
Ommatissus lybicus
Order: Hemiptera
|
the removal of Arsenophonus increased the developmental time of the immature stages and reduced the values of different life-history parameters including nymphal survival rate and adult longevity in the host
|
0.02% |
4.2
|
Weissella
|
RISB1982 |
Blattella germanica
Order: Blattodea
|
gut microbiota contributes to production of VCAs that act as fecal aggregation agents and that cockroaches discriminate among the complex odors that emanate from a diverse microbial community
|
0.06% |
3.9
|
Xanthomonas
|
RISB0498 |
Xylocopa appendiculata
Order: Hymenoptera
|
Xanthomonas strain from Japanese carpenter bee is effective PU-degradable bacterium and is able to use polyacryl-based PU as a nutritional source, as well as other types of PS-PU and PE-PU
|
0.03% |
3.8
|
Photorhabdus
|
RISB2532 |
Manduca sexta
Order: Lepidoptera
|
produces a small-molecule antibiotic (E)-1,3-dihydroxy-2-(isopropyl)-5-(2-phenylethenyl)benzene (ST) that also acts as an inhibitor of phenoloxidase (PO) in the insect host Manduca sexta.
|
0.02% |
3.8
|
Methylobacter
|
RISB1440 |
Lutzomyia evansi
Order: Diptera
|
Methylobacterium can be important in several physiological and metabolic processes in Lu. evansi, which suggests that interactions could occur with Leishmania parasite
|
0.01% |
3.4
|
Candidatus Blochmanniella
|
RISB2542 |
Camponotus
Order: Hymenoptera
|
Blochmannia provide essential amino acids to its host,Camponotus floridanus, and that it may also play a role in nitrogen recycling via its functional urease
|
0.02% |
3.2
|
Candidatus Blochmanniella
|
RISB1827 |
Camponotus floridanus
Order: Hymenoptera
|
a modulation of immune gene expression which may facilitate tolerance towards the endosymbionts and thus may contribute to their transovarial transmission
|
0.02% |
3.1
|
Streptococcus
|
RISB2625 |
Galleria mellonella
Order: Lepidoptera
|
suppress bacteria ingested with food by producing bacteriocin and by releasing a lysozyme like enzyme
|
0.99% |
3.0
|
Bacteroides
|
RISB0256 |
Leptocybe invasa
Order: Hymenoptera
|
Differences in Male-Killing Rickettsia Bacteria between Lineages of the Invasive Gall-Causing Pest Leptocybe invasa
|
0.52% |
2.8
|
Weissella
|
RISB0641 |
Formica
Order: Hymenoptera
|
exhibited abilities in catabolizing sugars (sucrose, trehalose, melezitose and raffinose) known to be constituents of hemipteran honeydew
|
0.06% |
2.8
|
Photorhabdus
|
RISB2573 |
Manduca sexta
Order: Lepidoptera
|
the bacteria are symbiotic with entomopathogenic nematodes but become pathogenic on release from the nematode into the insect blood system
|
0.02% |
2.8
|
Candidatus Blochmanniella
|
RISB2448 |
Camponotus floridanus
Order: Hymenoptera
|
nutritional contribution of the bacteria to host metabolism by production of essential amino acids and urease-mediated nitrogen recycling
|
0.02% |
2.8
|
Shewanella
|
RISB1924 |
Anopheles gambiae
Order: Diptera
|
may be related with mediating adaptation to different ecological niches or in shaping specific adult behaviors including mating
|
0.20% |
2.7
|
Comamonas
|
RISB2021 |
Bactrocera dorsalis
Order: Diptera
|
This group in the immature stages may be helping the insects to cope with oxidative stress by supplementing available oxygen.
|
0.23% |
2.7
|
Bacteroides
|
RISB0090 |
Hyphantria cunea
Order: Lepidoptera
|
enhance the compatibility of invasive pests to new hosts and enable more rapid adaptation to new habitats.
|
0.52% |
2.6
|
Streptococcus
|
RISB2624 |
Reticulitermes flavipes
Order: Blattodea
|
can be broken down into substances such as carbon dioxide, ammonia and acetic acid
|
0.99% |
2.6
|
Bartonella
|
RISB1673 |
Apis mellifera
Order: Hymenoptera
|
a gut symbiont of insects and that the adaptation to blood-feeding insects facilitated colonization of the mammalian bloodstream
|
0.06% |
2.6
|
Yersinia
|
RISB0492 |
Cimex hemipterus
Order: Hemiptera
|
the disruption of the abundant Yersinia possibly could be related to the enhanced susceptibility towards the insecticides
|
0.07% |
2.5
|
Liberibacter
|
RISB2310 |
Bactericerca cockerelli
Order: Hemiptera
|
manipulate plant signaling and defensive responses, suppress accumulation of defense transcripts like JA and SA
|
0.03% |
2.3
|
Streptococcus
|
RISB2604 |
Homona magnanima
Order: Lepidoptera
|
influence the growth of Bacillus thuringiensis in the larvae
|
0.99% |
2.2
|
Coprococcus
|
RISB0092 |
Hyphantria cunea
Order: Lepidoptera
|
enhance the compatibility of invasive pests to new hosts and enable more rapid adaptation to new habitats.
|
0.01% |
2.1
|
Xanthomonas
|
RISB0217 |
Xylocopa appendiculata
Order: Hymenoptera
|
strains biodegraded polyethylene terephthalate PET powder, broke it into its degradation products
|
0.03% |
2.0
|
Liberibacter
|
RISB2524 |
Bactericera cockerelli
Order: Hemiptera
|
Reduced expression of plant defensive gene in tomato probably for psyllid success
|
0.03% |
1.7
|
Dysgonomonas
|
RISB1235 |
Hermetia illucens
Order: Diptera
|
provides the tools for degrading of a broad range of substrates
|
0.03% |
1.3
|
Photorhabdus
|
RISB0532 |
Drosophila melanogaster
Order: Diptera
|
produces toxin complex (Tc) toxins as major virulence factors
|
0.02% |
1.2
|
Paraclostridium
|
RISB0028 |
Sesamia inferens
Order: Lepidoptera
|
degrade Chlorpyrifos and Chlorantraniliprole in vitro
|
0.15% |
1.2
|
Dickeya
|
RISB1086 |
Rhodnius prolixus
Order: Hemiptera
|
supply enzymatic biosynthesis of B-complex vitamins
|
0.02% |
1.0
|
Aeromonas
|
RISB2456 |
Bombyx mori
Order: Lepidoptera
|
able to utilize the CMcellulose and xylan
|
0.21% |
1.0
|
Liberibacter
|
RISB2333 |
Cacopsylla pyri
Order: Hemiptera
|
behaves as an endophyte rather than a pathogen
|
0.03% |
1.0
|
Priestia
|
RISB0839 |
Helicoverpa armigera
Order: Lepidoptera
|
producing amylase
|
0.48% |
0.8
|
Nocardioides
|
RISB1914 |
Hyles euphorbiae
Order: Lepidoptera
|
able to degrade alkaloids and/or latex
|
0.03% |
0.8
|
Gordonia
|
RISB1912 |
Hyles euphorbiae
Order: Lepidoptera
|
able to degrade alkaloids and/or latex
|
0.02% |
0.8
|
Aeromonas
|
RISB2086 |
Aedes aegypti
Order: Diptera
|
axenic larvae cannot develop
|
0.21% |
0.8
|
Methylobacter
|
RISB2053 |
Atractomorpha sinensis
Order: Orthoptera
|
associated with cellulolytic enzymes
|
0.01% |
0.7
|
Metabacillus
|
RISB0902 |
Myzus persicae
Order: Hemiptera
|
None
|
0.68% |
0.7
|
Peribacillus
|
RISB1877 |
Aedes aegypti
Order: Diptera
|
gut microbiome
|
0.33% |
0.6
|
Comamonas
|
RISB1875 |
Aedes aegypti
Order: Diptera
|
gut microbiome
|
0.23% |
0.5
|
Achromobacter
|
RISB1869 |
Aedes aegypti
Order: Diptera
|
gut microbiome
|
0.09% |
0.4
|
Methylobacter
|
RISB2340 |
Saturniidae
Order: Lepidoptera
|
Nitrogen fixation
|
0.01% |
0.4
|
Helicobacter
|
RISB0662 |
Melanaphis bambusae
Order: Hemiptera
|
None
|
0.26% |
0.3
|
Vagococcus
|
RISB0042 |
Aldrichina grahami
Order: Diptera
|
None
|
0.23% |
0.2
|
Myroides
|
RISB0626 |
Musca altica
Order: Diptera
|
None
|
0.19% |
0.2
|
Paraburkholderia
|
RISB0125 |
Physopelta gutta
Order: Hemiptera
|
None
|
0.13% |
0.1
|
Treponema
|
RISB0169 |
Reticulitermes flaviceps
Order: Blattodea
|
None
|
0.10% |
0.1
|
Achromobacter
|
RISB0383 |
Aphis gossypii
Order: Hemiptera
|
None
|
0.09% |
0.1
|
Yersinia
|
RISB0407 |
Anaphes nitens
Order: Hymenoptera
|
None
|
0.07% |
0.1
|
Weissella
|
RISB1566 |
Liometopum apiculatum
Order: Hymenoptera
|
None
|
0.06% |
0.1
|
Neisseria
|
RISB0512 |
Plutella xylostella
Order: Lepidoptera
|
None
|
0.05% |
0.1
|
Candidatus Profftia
|
RISB1664 |
Adelgidae
Order: Hemiptera
|
None
|
0.04% |
0.0
|
Micromonospora
|
RISB2033 |
Palomena viridissima
Order: Hemiptera
|
None
|
0.03% |
0.0
|
Apibacter
|
RISB0604 |
Apis cerana
Order: Hymenoptera
|
None
|
0.03% |
0.0
|
Candidatus Arthromitus
|
RISB2613 |
Multiple species
Order: None
|
None
|
0.02% |
0.0
|
Cupriavidus
|
RISB0694 |
Alydus tomentosus
Order: Hemiptera
|
None
|
0.02% |
0.0
|
Sediminibacterium
|
RISB0244 |
Spodoptera frugiperda
Order: Lepidoptera
|
None
|
0.02% |
0.0
|
Candidatus Phytoplasma
|
RISB1620 |
Cacopsylla pyricola
Order: Hemiptera
|
None
|
0.01% |
0.0
|
Download Files
Taxonomic Analysis Files
Assembly & Gene Prediction
Raw Sequencing Files
Direct download from NCBI SRARaw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.