SRR15912736 - Providencia stuartii

Basic Information

Run: SRR15912736

Assay Type: WGS

Bioproject: PRJNA763809

Biosample: SAMN21450743

Bytes: 5665793

Center Name: HUAZHONG AGRICULTURAL UNIVERSITY

Sequencing Information

Instrument: HiSeq X Ten

Library Layout: PAIRED

Library Selection: RANDOM

Platform: ILLUMINA

Geographic Information

Country: China

Continent: Asia

Location Name: China: Chenzhou

Latitude/Longitude: -

Sample Information

Host: Providencia stuartii

Isolation: -

Biosample Model: Microbe\, viral or environmental

Collection Date: Sep-24

Taxonomic Classification

Potential Symbionts

About Potential Symbionts

This table shows potential symbiont identified in the metagenome sample. Matches are scored based on:

Relative abundance in the sample
Species-level matches with known symbionts
Host insect order matches with reference records
Completeness and richness of functional records

Note: only the three highest scoring comparison records were retained for each symbiont species or genus in the sample

Based on our current records database, this section aims to identify potential functional symbionts in this metagenome sample, with scoring based on:

Relative abundance in sample
Species-level matches with known symbionts
Host insect order matches
Functional record completeness

Note: Showing top 3 highest scoring records for each species/genus

Symbiont Name	Record	Host Species	Function	Abundance	Score Score Composition: Symbiont Abundance Species match bonus Host match bonus Function richness Higher scores indicate stronger symbiotic relationship potential
Providencia	RISB1001	Anastrepha obliqua Order: Diptera	improve the sexual competitiveness of males	50.76%	51.6
Providencia	RISB1574	Bactrocera tau Order: Diptera	could attract male and female B. tau	50.76%	51.5
Providencia	RISB0984	Nasonia vitripennis Order: Hymenoptera	may highly associated with diapause	50.76%	51.5
Morganella morganii Species-level Match	RISB0772	Delia antiqua Order: Diptera	showed significant volatile inhibition activity against fungal entomopathogen Fusarium moniliforme, Botryosphaeria dothidea and both Fusarium oxysporum respectively	35.77%	44.1
Morganella morganii Species-level Match	RISB0008	Phormia regina Order: Diptera	deterred oviposition by female stable flies; The flies' oviposition decisions appear to be guided by bacteria-derived semiochemicals as the bacteria	35.77%	43.7
Morganella morganii Species-level Match	RISB1867	Costelytra zealandica Order: Coleoptera	Female beetles were previously shown to use phenol as their sex pheromone produced by symbiotic bacteria in the accessory or colleterial gland	35.77%	43.6
Lactococcus lactis Species-level Match	RISB0131	Ceratitis capitata Order: Diptera	The intestinal microbiota structure was significantly influenced by the probiotic treatment while still maintaining a stable core dominant community of Enterobacteriacea. The colony with these microbiome had the most improved potential functions in terms of gut microbes as well as the carbohydrates active enzymes most improved potential functions.	5.98%	16.0
Lactococcus lactis Species-level Match	RISB0967	Oulema melanopus Order: Coleoptera	contribute to the decomposition of complex carbohydrates, fatty acids, or polysaccharides in the insect gut. It might also contribute to the improvement of nutrient availability.	5.98%	14.5
Lactococcus lactis Species-level Match	RISB0113	Bactrocera dorsalis Order: Diptera	increase the resistance of B. dorsalis to β-cypermethrin by regulating cytochrome P450 (P450) enzymes and α-glutathione S-transferase (GST) activities	5.98%	14.0
Enterobacter mori Species-level Match	RISB1163	Bactrocera dorsalis Order: Diptera	Promote the growth of larvae	5.03%	10.6
Leuconostoc	RISB0812	Hypothenemus hampei Order: Coleoptera	might contribute to caffeine breakdown using the C-18 oxidation pathway	2.47%	3.9