SRR15912735 - Providencia stuartii
Basic Information
Run: SRR15912735
Assay Type: WGS
Bioproject: PRJNA763809
Biosample: SAMN21450744
Bytes: 5260876
Center Name: HUAZHONG AGRICULTURAL UNIVERSITY
Sequencing Information
Instrument: HiSeq X Ten
Library Layout: PAIRED
Library Selection: RANDOM
Platform: ILLUMINA
Geographic Information
Country: China
Continent: Asia
Location Name: China: Chenzhou
Latitude/Longitude: -
Sample Information
Host: Providencia stuartii
Isolation: -
Biosample Model: Microbe\, viral or environmental
Collection Date: Sep-24
Taxonomic Classification
Potential Symbionts
About Potential Symbionts
This table shows potential symbiont identified in the metagenome sample. Matches are scored based on:
- Relative abundance in the sample
- Species-level matches with known symbionts
- Host insect order matches with reference records
- Completeness and richness of functional records
Based on our current records database, this section aims to identify potential functional symbionts in this metagenome sample, with scoring based on:
- Relative abundance in sample
- Species-level matches with known symbionts
- Host insect order matches
- Functional record completeness
Note: Showing top 3 highest scoring records for each species/genus
Symbiont Name | Record | Host Species | Function | Abundance |
Score
Score Composition:
Higher scores indicate stronger symbiotic relationship potential |
---|---|---|---|---|---|
Morganella morganii
Species-level Match
|
RISB0772 |
Delia antiqua
Order: Diptera
|
showed significant volatile inhibition activity against fungal entomopathogen Fusarium moniliforme, Botryosphaeria dothidea and both Fusarium oxysporum respectively
|
72.40% |
80.7
|
Morganella morganii
Species-level Match
|
RISB0008 |
Phormia regina
Order: Diptera
|
deterred oviposition by female stable flies; The flies' oviposition decisions appear to be guided by bacteria-derived semiochemicals as the bacteria
|
72.40% |
80.4
|
Morganella morganii
Species-level Match
|
RISB1867 |
Costelytra zealandica
Order: Coleoptera
|
Female beetles were previously shown to use phenol as their sex pheromone produced by symbiotic bacteria in the accessory or colleterial gland
|
72.40% |
80.2
|
Providencia
|
RISB1001 |
Anastrepha obliqua
Order: Diptera
|
improve the sexual competitiveness of males
|
27.60% |
28.5
|
Providencia
|
RISB1574 |
Bactrocera tau
Order: Diptera
|
could attract male and female B. tau
|
27.60% |
28.3
|
Providencia
|
RISB0984 |
Nasonia vitripennis
Order: Hymenoptera
|
may highly associated with diapause
|
27.60% |
28.3
|
Download Files
Taxonomic Analysis Files
Assembly & Gene Prediction
Raw Sequencing Files
Direct download from NCBI SRARaw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.