SRR15276537 - Rhodnius prolixus

Basic Information

Run: SRR15276537

Assay Type: WGS

Bioproject: PRJNA744378

Biosample: SAMN20181675

Bytes: 924578390

Center Name: GOETHE UNIVERSITY FRANKFURT AM MAIN/GERMANY

Sequencing Information

Instrument: Illumina NovaSeq 6000

Library Layout: PAIRED

Library Selection: RANDOM

Platform: ILLUMINA

Geographic Information

Country: Brazil

Continent: South America

Location Name: Brazil: Belo Horizonte

Latitude/Longitude: 19.92097 S 43.95264 W

Sample Information

Host: Rhodnius prolixus

Isolation: -

Biosample Model: MIMS.me,MIGS/MIMS/MIMARKS.host-associated

Collection Date: 2019-02

Taxonomic Classification

Potential Symbionts

Based on our current records database, this section aims to identify potential functional symbionts in this metagenome sample, with scoring based on:

  • Relative abundance in sample
  • Species-level matches with known symbionts
  • Host insect order matches
  • Functional record completeness

Note: Showing top 3 highest scoring records for each species/genus

Symbiont Name Record Host Species Function Abundance
Score
Enterococcus faecalis
RISB0336
Riptortus pedestris
Order: Hemiptera
can be utilized as a novel probiotic which increase the survival rate of insects
78.70%
95.3
Enterococcus faecalis
RISB0497
Cryptolestes ferrugineus
Order: Coleoptera
bacteria can degrade malathion, pirimiphos-methyl, and deltamethrin and utilize these insecticides as the carbon source in vitro.
78.70%
86.3
Enterococcus faecalis
RISB1411
Bactrocera dorsalis
Order: Diptera
female Bactrocera dorsalis fed Enterococcus faecalis and Klebsiella oxytoca enriched diets lived longer but had lower fecundity
78.70%
86.2
Serratia marcescens
RISB0747
Rhodnius prolixus
Order: Hemiptera
Acinetobacter sp. in C. chinensis enriched after treating with saponin, and when incubating bacteria with saponin for 72 h, saponin content significantly decreased from 4.054 to 1.867 mg/mL (by 16S rRNA metagenome sequencing and HPLC)
0.02%
39.7
Serratia marcescens
RISB1369
Rhodnius prolixus
Order: Hemiptera
None
0.02%
35.0
Dickeya
RISB1086
Rhodnius prolixus
Order: Hemiptera
supply enzymatic biosynthesis of B-complex vitamins
0.04%
31.1
Serratia symbiotica
RISB0576
Acyrthosiphon pisum
Order: Hemiptera
process of regression from winged to wingless morph was inhibited by Serratia symbiotica. The existence of the symbiont did not affect the body mass and fecundity of adult aphids, but it increased the body weight of nymphs and temporally increased the quantity of a primary symbiont, Buchnera aphidicola
0.02%
20.0
Pantoea sp. CCBC3-3-1
RISB0118
Nezara viridula
Order: Hemiptera
plays an important role in interactions between insects and plants and could therefore be considered a valuable target for the development of sustainable pest control strategies;transmitted bacteria impacted plant chemical defenses and were able to degrade toxic plant metabolites, aiding the shield bug in its nutrition
0.01%
20.0
Buchnera aphidicola
RISB0236
Acyrthosiphon pisum
Order: Hemiptera
Buchnera the nutritional endosymbiont of A. pisum is located inside of bacteriocytes and requires aspartate from the aphid host, because it cannot make it de novo. Further Buchnera needs aspartate for the biosynthesis of the essential amino acids lysine and threonine, which the aphid and Buchnera require for survival
0.01%
20.0
Buchnera aphidicola
RISB2485
Macrosiphum euphorbiae
Order: Hemiptera
symbiont expression patterns differ between aphid clones with differing levels of virulence, and are influenced by the aphids' host plant. Potentially, symbionts may contribute to differential adaptation of aphids to host plant resistance
0.01%
19.8
Clostridium sp. OS1-26
RISB2301
Pyrrhocoris apterus
Order: Hemiptera
could play an important role for the insect by degrading complex dietary components, providing nutrient supplementation, or detoxifying noxious chemicals (e.g. cyclopropenoic fatty acids or gossypol) in the diet
0.01%
19.2
Buchnera aphidicola
RISB0685
Acyrthosiphon pisum
Order: Hemiptera
It supplies the host with vitamins and essential amino acids, such as arginine and methionine that aphids cannot synthesize or derive insufficiently from their diet, the phloem sap of plants
0.01%
18.8
Pantoea sp. CCBC3-3-1
RISB0119
Nezara viridula
Order: Hemiptera
plays an important role in interactions between insects and plants and could therefore be considered a valuable target for the development of sustainable pest control strategies.
0.01%
18.6
Burkholderia cepacia
RISB0709
Nilaparvata lugens
Order: Hemiptera
BsNLG8 significantly inhibited the growth of phytopathogenic fungi and also demonstrated the ability to produce siderophores, which explains its antagonistic mechanism.
0.01%
18.4
Pantoea sp. CCBC3-3-1
RISB1491
Nezara viridula
Order: Hemiptera
help stinkbugs to feed on soybean developing seeds in spite of its chemical defenses by degrading isoflavonoids and deactivate soybean protease inhibitors
0.01%
18.1
Burkholderia cepacia
RISB0089
Nilaparvata lugens
Order: Hemiptera
immune gene Defensin A contribute to the resistance against Nicotine-induced stress in host
0.01%
16.8
Pseudomonas sp. CIP-10
RISB0700
Nilaparvata lugens
Order: Hemiptera
Pseudomonas sp. composition and abundance correlated with BPH survivability
0.04%
16.5
Symbiopectobacterium
RISB1889
Pseudococcus longispinus
Order: Hemiptera
a nested symbiotic arrangement, where one bacterium lives inside another bacterium,occurred in building the mosaic metabolic pathways seen in mitochondria and plastids
2.44%
15.8
Escherichia coli
RISB0412
Melanaphis sacchari
Order: Hemiptera
None
0.15%
15.2
Salmonella enterica
RISB0413
Melanaphis sacchari
Order: Hemiptera
None
0.06%
15.1
Candidatus Erwinia haradaeae
RISB1632
Lachninae
Order: Hemiptera
None
0.03%
15.0
Agrobacterium tumefaciens
RISB0650
Melanaphis bambusae
Order: Hemiptera
None
0.02%
15.0
Microbacterium esteraromaticum
RISB0904
Myzus persicae
Order: Hemiptera
None
0.01%
15.0
Lactococcus
RISB2305
Pyrrhocoris apterus
Order: Hemiptera
could play an important role for the insect by degrading complex dietary components, providing nutrient supplementation, or detoxifying noxious chemicals (e.g. cyclopropenoic fatty acids or gossypol) in the diet
0.02%
14.2
Pectobacterium
RISB1889
Pseudococcus longispinus
Order: Hemiptera
a nested symbiotic arrangement, where one bacterium lives inside another bacterium,occurred in building the mosaic metabolic pathways seen in mitochondria and plastids
0.16%
13.5
Sphingomonas
RISB0420
Aphis gossypii
Order: Hemiptera
Sphingomonas could mediate A. gossypii resistance to imidacloprid by hydroxylation and nitroreduction
0.02%
12.0
Sphingomonas
RISB1307
Aphis gossypii
Order: Hemiptera
have been previously described in associations with phloem-feeding insects, in low abundances
0.02%
11.9
Lactococcus
RISB0337
Riptortus pedestris
Order: Hemiptera
can be utilized as a novel probiotic which increase the survival rate of insects
0.02%
11.6
Xenorhabdus
RISB2270
Acyrthosiphon pisum
Order: Hemiptera
have the gene PIN1 encoding the protease inhibitor protein against aphids
0.01%
11.5
Pectobacterium
RISB0798
Pseudoregma bambucicola
Order: Hemiptera
may help P. bambucicola feed on the stalks of bamboo
0.16%
11.2
Arthrobacter
RISB0580
Aleurodicus rugioperculatus
Order: Hemiptera
may indirectly affect whitefly oviposition
0.02%
10.9
Curtobacterium
RISB0900
Myzus persicae
Order: Hemiptera
None
0.14%
10.1
Listeria monocytogenes
RISB2308
Drosophila melanogaster
Order: Diptera
L. monocytogenes infection disrupts host energy metabolism by depleting energy stores (triglycerides and glycogen) and reducing metabolic pathway activity (beta-oxidation and glycolysis). The infection affects antioxidant defense by reducing uric acid levels and alters amino acid metabolism. These metabolic changes are accompanied by melanization, potentially linked to decreased tyrosine levels.
0.10%
10.1
Klebsiella pneumoniae
RISB2185
Scirpophaga incertulas
Order: Lepidoptera
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases that are secreted by gut microbiota to digest the structural and recalcitrant lignocellulosic residues in their foods.
0.08%
10.1
Micromonospora
RISB2033
Palomena viridissima
Order: Hemiptera
None
0.06%
10.1
Brevibacterium
RISB0897
Myzus persicae
Order: Hemiptera
None
0.05%
10.1
Bacillus cereus
RISB2161
Termitidae
Order: Blattodea
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases that are secreted by gut microbiota to digest the structural and recalcitrant lignocellulosic residues in their foods.
0.03%
10.0
Sphingomonas
RISB0167
Pseudoregma bambucicola
Order: Hemiptera
None
0.02%
10.0
Flavobacterium
RISB0659
Melanaphis bambusae
Order: Hemiptera
None
0.02%
10.0
Microbacterium oleivorans
RISB2194
Scirpophaga incertulas
Order: Lepidoptera
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases that are secreted by gut microbiota to digest the structural and recalcitrant lignocellulosic residues in their foods.
0.01%
10.0
Cellulosimicrobium sp. ES-005
RISB2182
Armadillidae
Order: Isopoda
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases that are secreted by gut microbiota to digest the structural and recalcitrant lignocellulosic residues in their foods.
0.01%
10.0
Wolbachia pipientis
RISB0766
Aedes fluviatilis
Order: Diptera
The presence of Wolbachia pipientis improves energy performance in A. fluviatilis cells; it affects the regulation of key energy sources such as lipids, proteins, and carbohydrates, making the distribution of actin more peripheral and with extensions that come into contact with neighboring cells.
0.01%
10.0
Staphylococcus
RISB0672
Melanaphis bambusae
Order: Hemiptera
None
0.01%
10.0
Methylorubrum
RISB0903
Myzus persicae
Order: Hemiptera
None
0.01%
10.0
Cupriavidus
RISB0694
Alydus tomentosus
Order: Hemiptera
None
0.01%
10.0
Chryseobacterium
RISB0652
Melanaphis bambusae
Order: Hemiptera
None
0.01%
10.0
Helicobacter
RISB0662
Melanaphis bambusae
Order: Hemiptera
None
0.00%
10.0
Pseudomonas sp. CIP-10
RISB1622
Dendroctonus valens
Order: Coleoptera
volatiles from predominant bacteria regulate the consumption sequence of carbon sources d-pinitol and d-glucose in the fungal symbiont Leptographium procerum, and appear to alleviate the antagonistic effect from the fungus against RTB larvae
0.04%
9.9
Bacillus thuringiensis
RISB0109
Tuta absoluta
Order: Lepidoptera
Individual exposure of B. thuringiensis isolates to P. absoluta revealed high susceptibility of the pest and could potentially be used to develop effective, safe and affordable microbial pesticides for the management of P. absoluta.
0.03%
9.7
Escherichia coli
RISB1339
Manduca sexta
Order: Lepidoptera
modulate immunity-related gene expression in the infected F0 larvae, and also in their offspring, triggered immune responses in the infected host associated with shifts in both DNA methylation and histone acetylation
0.15%
9.5
Streptomyces sp. WAC00303
RISB0943
Polybia plebeja
Order: Hymenoptera
this bacterium produces antimicrobial compounds that are active against Hirsutella citriformis, a natural fungal enemy of its host, and the human pathogens Staphylococcus aureus and Candida albicans
0.09%
9.1
Stenotrophomonas maltophilia
RISB1122
Bombyx mori
Order: Lepidoptera
facilitate host resistance against organophosphate insecticides, provides essential amino acids that increase host fitness and allow the larvae to better tolerate the toxic effects of the insecticide.
0.03%
9.0
Bacillus cereus
RISB2489
Anticarsia gemmatalis
Order: Lepidoptera
allow the adaptation of this insect to plants rich in protease inhibitors, minimizing the potentially harmful consequences of protease inhibitors from some of this insect host plants, such as soybean
0.03%
9.0
Streptomyces sp. T12
RISB0943
Polybia plebeja
Order: Hymenoptera
this bacterium produces antimicrobial compounds that are active against Hirsutella citriformis, a natural fungal enemy of its host, and the human pathogens Staphylococcus aureus and Candida albicans
0.03%
9.0
Streptomyces sp. N50
RISB0943
Polybia plebeja
Order: Hymenoptera
this bacterium produces antimicrobial compounds that are active against Hirsutella citriformis, a natural fungal enemy of its host, and the human pathogens Staphylococcus aureus and Candida albicans
0.02%
9.0
Klebsiella michiganensis
RISB1052
Bactrocera dorsalis
Order: Diptera
K. michiganensis BD177 has the strain-specific ability to provide three essential amino acids (phenylalanine, tryptophan and methionine) and two vitamins B (folate and riboflavin) to B. dorsalis
0.03%
8.9
Candidatus Sodalis pierantonius
RISB2035
Sitophilus oryzae
Order: Coleoptera
endosymbiont dynamics parallels numerous transcriptional changes in weevil developing adults and affects several biological processes, including metabolism and development
0.05%
8.5
Citrobacter amalonaticus
RISB0192
Hermetia illucens
Order: Diptera
can directly promote the expression of two gene families related to intestinal protein metabolism: Hitryp serine protease trypsin family and Himtp metallopeptidase family
0.01%
8.4
Pseudomonas sp. CIP-10
RISB2224
Leptinotarsa decemlineata
Order: Coleoptera
Colorado potato beetle (Leptinotarsa decemlineata) larvae exploit bacteria in their oral secretions to suppress antiherbivore defenses in tomato (Solanum lycopersicum)
0.04%
8.4
Lactobacillus sp. ESL0677
RISB0292
Lymantria dispar asiatica
Order: Lepidoptera
Beauveria bassiana infection-based assays showed that the mortality of non-axenic L. dispar asiatica larvae was significantly higher than that of axenic larvae at 72 h.
0.01%
8.4
Morganella morganii
RISB0772
Delia antiqua
Order: Diptera
showed significant volatile inhibition activity against fungal entomopathogen Fusarium moniliforme, Botryosphaeria dothidea and both Fusarium oxysporum respectively
0.01%
8.3
Morganella morganii
RISB0008
Phormia regina
Order: Diptera
deterred oviposition by female stable flies; The flies' oviposition decisions appear to be guided by bacteria-derived semiochemicals as the bacteria
0.01%
8.0
Citrobacter freundii
RISB0517
Leptinotarsa decemlineata
Order: Coleoptera
affect the cellular and humoral immunity of the insect, increasing its susceptibility to Bacillus thuringiensis var. tenebrionis (morrisoni) (Bt)
0.05%
8.0
Blattabacterium cuenoti
RISB0133
Panesthiinae
Order: Blattodea
enables hosts to subsist on a nutrient-poor diet; endosymbiont genome erosions are associated with repeated host transitions to an underground life
0.01%
8.0
Escherichia coli
RISB0128
Tribolium castaneum
Order: Coleoptera
may produce 4,8-dimethyldecanal (DMD) production that is strongly associated with attraction to females and host pheromone communication
0.15%
7.9
Morganella morganii
RISB1867
Costelytra zealandica
Order: Coleoptera
Female beetles were previously shown to use phenol as their sex pheromone produced by symbiotic bacteria in the accessory or colleterial gland
0.01%
7.9
Klebsiella michiganensis
RISB1131
Bactrocera dorsalis
Order: Diptera
promotes host resistance to low-temperature stress by stimulating its arginine and proline metabolism pathway in adult Bactrocera dorsalis
0.03%
7.8
Citrobacter freundii
RISB0127
Tribolium castaneum
Order: Coleoptera
may produce 4,8-dimethyldecanal (DMD) production that is strongly associated with attraction to females and host pheromone communication
0.05%
7.8
Sodalis glossinidius
RISB2256
Glossina palpalis
Order: Diptera
flies harbouring this symbiont have three times greater probability of being infected by trypanosomes than flies without the symbiont.
0.06%
7.7
Stenotrophomonas maltophilia
RISB1227
Delia antiqua
Order: Diptera
six bacteria protect larvae from infection with the entomopathogen Beauveria bassiana through symbiotic bacterium-derived organic acids
0.03%
7.7
Wolbachia pipientis
RISB1515
Drosophila melanogaster
Order: Diptera
increases the recombination rate observed across two genomic intervals and increases the efficacy of natural selection in hosts
0.01%
7.6
Enterobacter cloacae
RISB1699
Plutella xylostella
Order: Lepidoptera
play an important role in the breakdown of plant cell walls, detoxification of plant phenolics, and synthesis of amino acids.
0.05%
7.6
Enterobacter asburiae
RISB1700
Plutella xylostella
Order: Lepidoptera
play an important role in the breakdown of plant cell walls, detoxification of plant phenolics, and synthesis of amino acids.
0.00%
7.5
Enterobacter cloacae
RISB2217
Thermobia domestica
Order: Zygentoma
Mediated by two microbial symbiont, the firebat saggregates in response to the faeces of conspecifics
0.05%
7.1
Wolbachia pipientis
RISB1354
Drosophila melanogaster
Order: Diptera
Wolbachia influence octopamine metabolism in the Drosophila females, which is by the symbiont genotype
0.01%
7.1
Candidatus Sodalis pierantonius
RISB0972
Sitophilus oryzae
Order: Coleoptera
produce vitamins and essential amino acids required for insect development and cuticle biosynthesis
0.05%
7.0
Micrococcus sp. 2A
RISB2276
Ostrinia nubilalis
Order: Lepidoptera
extreme cellulolytic enzymes, at extreme (pH 12) conditions, exhibited cellulolytic properties
0.01%
6.9
Stenotrophomonas maltophilia
RISB1141
Hermetia illucens
Order: Diptera
enhance the insect growth performance when reared on an unbalanced nutritionally poor diet
0.03%
6.8
Corynebacterium variabile
RISB0363
Pagiophloeus tsushimanus
Order: Coleoptera
terpenoid-degrading: the highest degradation rates of D-camphor, linalool, and eucalyptol
0.02%
6.8
Kosakonia sp. SMBL-WEM22
RISB0810
Hypothenemus hampei
Order: Coleoptera
might contribute to caffeine breakdown using the C-16 oxidation pathway
0.01%
6.4
Microbacterium hominis
RISB1997
Diatraea saccharalis
Order: Lepidoptera
possess cellulose degrading activity
0.04%
5.8
Blattabacterium cuenoti
RISB0518
Cryptocercus punctulatus
Order: Blattodea
collaborative arginine biosynthesis
0.01%
5.7
Rhodococcus ruber
RISB1157
Tenebrio molitor
Order: Coleoptera
degrading plastics
0.19%
5.6
Blattabacterium cuenoti
RISB0093
Blattella germanica
Order: Blattodea
obligate endosymbiont
0.01%
5.4
Arsenophonus nasoniae
RISB0428
Nasonia vitripennis
Order: Hymenoptera
male killing
0.02%
5.3
Lactococcus
RISB0131
Ceratitis capitata
Order: Diptera
The intestinal microbiota structure was significantly influenced by the probiotic treatment while still maintaining a stable core dominant community of Enterobacteriacea. The  colony with these microbiome had the most improved potential functions in terms of gut microbes as well as the carbohydrates active enzymes most improved potential functions.
0.02%
5.0
Arsenophonus nasoniae
RISB0366
Pachycrepoideus vindemmiae
Order: Hymenoptera
None
0.02%
5.0
Burkholderia cepacia
RISB2389
Apis mellifera
Order: Hymenoptera
None
0.01%
5.0
Staphylococcus
RISB0945
Callosobruchus maculatus
Order: Coleoptera
The strain encodes complete biosynthetic pathways for the production of B vitamins and amino acids, including tyrosine; A carbohydrate-active enzyme search revealed that the genome codes for a number of digestive enzymes, reflecting the nutritional ecology of C. maculatus
0.01%
5.0
Lactobacillus apis
RISB1556
Apis florea
Order: Hymenoptera
None
0.01%
5.0
Staphylococcus
RISB2497
Anticarsia gemmatalis
Order: Lepidoptera
allow the adaptation of this insect to plants rich in protease inhibitors, minimizing the potentially harmful consequences of protease inhibitors from some of this insect host plants, such as soybean
0.01%
4.0
Nocardia
RISB0947
Acromyrmex
Order: Hymenoptera
Pseudonocardia in the Acromyrmex leaf-cutter ants as a protective partner against the entomopathogenic fungus Metarhizium
1.39%
3.8
Xanthomonas
RISB0498
Xylocopa appendiculata
Order: Hymenoptera
Xanthomonas strain from Japanese carpenter bee is effective PU-degradable bacterium and is able to use polyacryl-based PU as a nutritional source, as well as other types of PS-PU and PE-PU
0.01%
3.8
Amycolatopsis
RISB0483
Trachymyrmex smithi
Order: Hymenoptera
inhibited the growth of Pseudonocardia symbionts under laboratory conditions. The novel analog nocamycin V from the strain was identified as the antibacterial compound
0.21%
3.6
Nocardia
RISB1218
Mycocepurus smithii
Order: Hymenoptera
produce secondary metabolites with antibiotic activity that protects the fungus garden against pathogens
1.39%
3.5
Arthrobacter
RISB0769
Delia antiqua
Order: Diptera
showed significant volatile inhibition activity against fungal entomopathogen Fusarium moniliforme, Botryosphaeria dothidea and both Fusarium oxysporum respectively
0.02%
3.3
Amycolatopsis
RISB0199
Trachymyrmex
Order: Hymenoptera
produce antibiotic EC0-0501 that has strong activity against ant-associated Actinobacteria and may also play a role in bacterial competition in this niche
0.21%
3.3
Leucobacter
RISB0771
Delia antiqua
Order: Diptera
showed significant contact inhibition activity against fungal entomopathogen Fusarium moniliforme, Botryosphaeria dothidea and both Fusarium oxysporum respectively
0.01%
3.3
Tsukamurella
RISB1531
Hoplothrips carpathicus
Order: Thysanoptera
This genus was identified as dominant in intensively feeding second-stage larvae and suggests a mechanism by which L2 larvae might process cellulose.
0.11%
3.1
Pseudonocardia
RISB0947
Acromyrmex
Order: Hymenoptera
Pseudonocardia in the Acromyrmex leaf-cutter ants as a protective partner against the entomopathogenic fungus Metarhizium
0.13%
2.6
Bacteroides
RISB0256
Leptocybe invasa
Order: Hymenoptera
Differences in Male-Killing Rickettsia Bacteria between Lineages of the Invasive Gall-Causing Pest Leptocybe invasa
0.01%
2.3
Pseudonocardia
RISB1218
Mycocepurus smithii
Order: Hymenoptera
produce secondary metabolites with antibiotic activity that protects the fungus garden against pathogens
0.13%
2.2
Bacteroides
RISB0090
Hyphantria cunea
Order: Lepidoptera
enhance the compatibility of invasive pests to new hosts and enable more rapid adaptation to new habitats.
0.01%
2.1
Blautia
RISB0091
Hyphantria cunea
Order: Lepidoptera
enhance the compatibility of invasive pests to new hosts and enable more rapid adaptation to new habitats.
0.01%
2.1
Bacteroides
RISB1183
Oryzaephilus surinamensis
Order: Coleoptera
supplement precursors for the cuticle synthesis and thereby enhance desiccation resistance of its host
0.01%
2.1
Xanthomonas
RISB0217
Xylocopa appendiculata
Order: Hymenoptera
strains biodegraded polyethylene terephthalate PET powder, broke it into its degradation products
0.01%
2.0
Arthrobacter
RISB1084
Hermetia illucens
Order: Diptera
Arthrobacter AK19 doubled the growth rate of larvae and increased the waste conversion by 25-30%
0.02%
1.9
Xenorhabdus
RISB1372
Spodoptera frugiperda
Order: Lepidoptera
the products of the symbiont gene cluster inhibit Spodoptera frugiperda phenoloxidase activity
0.01%
1.9
Gordonia
RISB1912
Hyles euphorbiae
Order: Lepidoptera
able to degrade alkaloids and/or latex
0.86%
1.6
Bradyrhizobium
RISB0135
Coccinella septempunctata
Order: Coleoptera
be commonly found in plant roots and they all have nitrogen fixation abilities
0.02%
1.6
Vibrio
RISB1810
Monochamus galloprovincialis
Order: Coleoptera
Have the ability for degradation of cellulose, proteins and starch
0.02%
1.3
Variovorax
RISB2153
Osmia bicornis
Order: Hymenoptera
may be essential to support Osmia larvae in their nutrient uptake
0.01%
1.3
Mycobacterium
RISB1156
Nicrophorus concolor
Order: Coleoptera
produces Antimicrobial compounds
0.53%
1.2
Brevibacterium
RISB0464
Acrida cinerea
Order: Orthoptera
correlated with the hemicellulose digestibility
0.05%
1.0
Clavibacter
RISB0465
Trilophidia annulata
Order: Orthoptera
correlated with the hemicellulose digestibility
0.01%
1.0
Curtobacterium
RISB1910
Hyles euphorbiae
Order: Lepidoptera
able to degrade alkaloids and/or latex
0.14%
0.9
Nocardioides
RISB1914
Hyles euphorbiae
Order: Lepidoptera
able to degrade alkaloids and/or latex
0.13%
0.9
Brevibacterium
RISB2359
Bombyx mori
Order: Lepidoptera
producing lipase in a gut environment
0.05%
0.8
Chryseobacterium
RISB2092
Aedes aegypti
Order: Diptera
axenic larvae cannot develop
0.01%
0.6
Priestia
RISB0839
Helicoverpa armigera
Order: Lepidoptera
producing amylase
0.01%
0.4
Chryseobacterium
RISB1874
Aedes aegypti
Order: Diptera
gut microbiome
0.01%
0.3
Leucobacter
RISB1876
Aedes aegypti
Order: Diptera
gut microbiome
0.01%
0.3
Kluyvera
RISB1064
Oryctes rhinoceros
Order: Coleoptera
gut microbe
0.00%
0.2
Pectobacterium
RISB1772
Muscidae
Order: Diptera
None
0.16%
0.2
Micromonospora
RISB2034
Harpalus sinicus
Order: Coleoptera
None
0.06%
0.1
Variovorax
RISB1712
Phlebotomus papatasi
Order: Diptera
None
0.01%
0.0
Propionibacterium
RISB0490
Ceratitis capitata
Order: Diptera
None
0.01%
0.0
Neisseria
RISB0512
Plutella xylostella
Order: Lepidoptera
None
0.01%
0.0

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Taxonomic Analysis Files

Kraken Report

Detailed taxonomic classification

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Krona HTML

Interactive taxonomic visualization

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Bracken Results

Species abundance estimation

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Assembly & Gene Prediction

Assembled Contigs

MEGAHIT assembly results

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Predicted Genes

Gene sequences (FASTA)

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Gene Annotation

GFF format annotation

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Genome Binning

MetaBAT2 Bins

Compressed genome bins

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Bin Information

Quality metrics and statistics

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR15276537
881.7 MB Download

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