SRR13786466 - Hypera postica

Basic Information

Run: SRR13786466

Assay Type: WGS

Bioproject: PRJNA704818

Biosample: SAMN18056974

Bytes: 12793101

Center Name: UNIVERSITY OF OXFORD

Instrument: Illumina MiSeq

Library Layout: SINGLE

Library Selection: RANDOM PCR

Platform: ILLUMINA

Country: France

Continent: Europe

Location Name: France

Latitude/Longitude: 43.705043 N 3.863410 E

Isolation: larvae pool

Biosample Model: Metagenome or environmental

Collection Date: 2015-04-01

About Potential Symbionts

This table shows potential symbiont identified in the metagenome sample. Matches are scored based on:

Note: only the three highest scoring comparison records were retained for each symbiont species or genus in the sample

Based on our current records database, this section aims to identify potential functional symbionts in this metagenome sample, with scoring based on:

Note: Showing top 3 highest scoring records for each species/genus

Symbiont Name	Record	Host Species	Function	Abundance	Score Score Composition: Symbiont Abundance Species match bonus Host match bonus Function richness Higher scores indicate stronger symbiotic relationship potential
Lactiplantibacillus	RISB1465	Drosophila melanogaster Order: Diptera	L. plantarum increases its growth-promotion ability by adapting to Drosophila diet	6.08%	7.7
Lactiplantibacillus	RISB0674	Drosophila melanogaster Order: Diptera	could effectively inhibit fungal spore germinations	6.08%	7.1
Lactiplantibacillus	RISB0608	Drosophila melanogaster Order: Diptera	None	6.08%	6.1