SRR13786462 - Hypera postica

Basic Information

Run: SRR13786462

Assay Type: WGS

Bioproject: PRJNA704818

Biosample: SAMN18056986

Bytes: 10365276

Center Name: UNIVERSITY OF OXFORD

Instrument: Illumina MiSeq

Library Layout: SINGLE

Library Selection: RANDOM PCR

Platform: ILLUMINA

Country: France

Continent: Europe

Location Name: France

Latitude/Longitude: 43.703736 N 3.858611 E

Isolation: larvae pool

Biosample Model: Metagenome or environmental

Collection Date: 2015-04-01

About Potential Symbionts

This table shows potential symbiont identified in the metagenome sample. Matches are scored based on:

Note: only the three highest scoring comparison records were retained for each symbiont species or genus in the sample

Based on our current records database, this section aims to identify potential functional symbionts in this metagenome sample, with scoring based on:

Note: Showing top 3 highest scoring records for each species/genus

Symbiont Name	Record	Host Species	Function	Abundance	Score Score Composition: Symbiont Abundance Species match bonus Host match bonus Function richness Higher scores indicate stronger symbiotic relationship potential
Enterobacter asburiae Species-level Match Host Order Match	RISB1150	Plodia interpunctella Order: Coleoptera	damaged polyethylene (PE) films	53.05%	68.7
Enterobacter asburiae Species-level Match	RISB1700	Plutella xylostella Order: Lepidoptera	play an important role in the breakdown of plant cell walls, detoxification of plant phenolics, and synthesis of amino acids.	53.05%	60.6
Enterobacter asburiae Species-level Match	RISB1695	Plutella xylostella Order: Lepidoptera	participate in the synthesis of host lacking amino acids histidine and threonine	53.05%	59.7