SRR10017630 - Agroiconota sp.

Basic Information

Run: SRR10017630

Assay Type: WGS

Bioproject: PRJNA561424

Biosample: SAMN12618095

Bytes: 3312286379

Center Name: EMORY UNIVERSITY

Sequencing Information

Instrument: Illumina HiSeq 2500

Library Layout: PAIRED

Library Selection: RANDOM

Platform: ILLUMINA

Geographic Information

Country: Panama

Continent: North America

Location Name: Panama: Panama City

Latitude/Longitude: 8.9824 N 79.5199 W

Sample Information

Host: Agroiconota sp.

Isolation: -

Biosample Model: Metagenome or environmental

Collection Date: 2017-05-01

Taxonomic Classification

Potential Symbionts

Based on our current records database, this section aims to identify potential functional symbionts in this metagenome sample, with scoring based on:

  • Relative abundance in sample
  • Species-level matches with known symbionts
  • Host insect order matches
  • Functional record completeness

Note: Showing top 3 highest scoring records for each species/genus

Symbiont Name Record Host Species Function Abundance
Score
Pseudomonas sp. CIP-10
RISB1622
Dendroctonus valens
Order: Coleoptera
volatiles from predominant bacteria regulate the consumption sequence of carbon sources d-pinitol and d-glucose in the fungal symbiont Leptographium procerum, and appear to alleviate the antagonistic effect from the fungus against RTB larvae
0.25%
20.1
Staphylococcus gallinarum
RISB0945
Callosobruchus maculatus
Order: Coleoptera
The strain encodes complete biosynthetic pathways for the production of B vitamins and amino acids, including tyrosine; A carbohydrate-active enzyme search revealed that the genome codes for a number of digestive enzymes, reflecting the nutritional ecology of C. maculatus
0.03%
20.0
Pseudomonas sp. URMO17WK12:I11
RISB1622
Dendroctonus valens
Order: Coleoptera
volatiles from predominant bacteria regulate the consumption sequence of carbon sources d-pinitol and d-glucose in the fungal symbiont Leptographium procerum, and appear to alleviate the antagonistic effect from the fungus against RTB larvae
0.06%
19.9
Pseudomonas sp. R4-35-07
RISB1622
Dendroctonus valens
Order: Coleoptera
volatiles from predominant bacteria regulate the consumption sequence of carbon sources d-pinitol and d-glucose in the fungal symbiont Leptographium procerum, and appear to alleviate the antagonistic effect from the fungus against RTB larvae
0.04%
19.9
Acinetobacter sp. NyZ410
RISB0730
Curculio chinensis
Order: Coleoptera
Acinetobacter sp. in C. chinensis enriched after treating with saponin, and when incubating bacteria with saponin for 72 h, saponin content significantly decreased from 4.054 to 1.867 mg/mL (by 16S rRNA metagenome sequencing and HPLC)
0.06%
19.7
Acinetobacter sp. Marseille-Q1620
RISB0730
Curculio chinensis
Order: Coleoptera
Acinetobacter sp. in C. chinensis enriched after treating with saponin, and when incubating bacteria with saponin for 72 h, saponin content significantly decreased from 4.054 to 1.867 mg/mL (by 16S rRNA metagenome sequencing and HPLC)
0.02%
19.7
Acinetobacter sp. KCTC 92772
RISB0730
Curculio chinensis
Order: Coleoptera
Acinetobacter sp. in C. chinensis enriched after treating with saponin, and when incubating bacteria with saponin for 72 h, saponin content significantly decreased from 4.054 to 1.867 mg/mL (by 16S rRNA metagenome sequencing and HPLC)
0.01%
19.7
Buchnera aphidicola
RISB0236
Acyrthosiphon pisum
Order: Hemiptera
Buchnera the nutritional endosymbiont of A. pisum is located inside of bacteriocytes and requires aspartate from the aphid host, because it cannot make it de novo. Further Buchnera needs aspartate for the biosynthesis of the essential amino acids lysine and threonine, which the aphid and Buchnera require for survival
9.02%
19.0
Escherichia coli
RISB0128
Tribolium castaneum
Order: Coleoptera
may produce 4,8-dimethyldecanal (DMD) production that is strongly associated with attraction to females and host pheromone communication
1.18%
18.9
Buchnera aphidicola
RISB2485
Macrosiphum euphorbiae
Order: Hemiptera
symbiont expression patterns differ between aphid clones with differing levels of virulence, and are influenced by the aphids' host plant. Potentially, symbionts may contribute to differential adaptation of aphids to host plant resistance
9.02%
18.8
Lactococcus lactis
RISB0967
Oulema melanopus
Order: Coleoptera
contribute to the decomposition of complex carbohydrates, fatty acids, or polysaccharides in the insect gut. It might also contribute to the improvement of nutrient availability.
0.17%
18.7
Bacillus sp. 7D3
RISB1645
Osphranteria coerulescens
Order: Coleoptera
The isolate has cellulolytic activity and can hydrolyze CMC, avicel, cellulose and sawdust with broad temperature and pH stability
1.11%
18.7
Enterococcus faecalis
RISB0497
Cryptolestes ferrugineus
Order: Coleoptera
bacteria can degrade malathion, pirimiphos-methyl, and deltamethrin and utilize these insecticides as the carbon source in vitro.
1.13%
18.7
Enterococcus faecalis
RISB2042
Harpalus pensylvanicus
Order: Coleoptera
E. faecalis facilitate seed consumption by H. pensylvanicus, possibly by contributing digestive enzymes to their host
1.13%
18.5
Sphingobacterium sp. ML3W
RISB2227
Leptinotarsa decemlineata
Order: Coleoptera
Colorado potato beetle (Leptinotarsa decemlineata) larvae exploit bacteria in their oral secretions to suppress antiherbivore defenses in tomato (Solanum lycopersicum)
0.04%
18.4
Sphingobacterium sp. UDSM-2020
RISB2227
Leptinotarsa decemlineata
Order: Coleoptera
Colorado potato beetle (Leptinotarsa decemlineata) larvae exploit bacteria in their oral secretions to suppress antiherbivore defenses in tomato (Solanum lycopersicum)
0.03%
18.4
Sphingobacterium sp. SRCM116780
RISB2227
Leptinotarsa decemlineata
Order: Coleoptera
Colorado potato beetle (Leptinotarsa decemlineata) larvae exploit bacteria in their oral secretions to suppress antiherbivore defenses in tomato (Solanum lycopersicum)
0.02%
18.4
Klebsiella oxytoca
RISB1506
Cleonus trivittatus
Order: Coleoptera
Antibiotic-treated larvae suffered growth retardation on a diet containing plant extract or swainsonine. Gut bacteria showed toxin-degradation activities in vitro
0.01%
18.3
Citrobacter freundii
RISB0517
Leptinotarsa decemlineata
Order: Coleoptera
affect the cellular and humoral immunity of the insect, increasing its susceptibility to Bacillus thuringiensis var. tenebrionis (morrisoni) (Bt)
0.15%
18.1
Morganella morganii
RISB1867
Costelytra zealandica
Order: Coleoptera
Female beetles were previously shown to use phenol as their sex pheromone produced by symbiotic bacteria in the accessory or colleterial gland
0.04%
17.9
Citrobacter freundii
RISB0127
Tribolium castaneum
Order: Coleoptera
may produce 4,8-dimethyldecanal (DMD) production that is strongly associated with attraction to females and host pheromone communication
0.15%
17.9
Streptomyces sp. T12
RISB0777
Copris tripartitus
Order: Coleoptera
contribute brood ball hygiene by inhibiting fungal parasites in the environment
1.26%
17.8
Buchnera aphidicola
RISB0685
Acyrthosiphon pisum
Order: Hemiptera
It supplies the host with vitamins and essential amino acids, such as arginine and methionine that aphids cannot synthesize or derive insufficiently from their diet, the phloem sap of plants
9.02%
17.8
Bacillus subtilis
RISB0494
Sitophilus oryzae
Order: Coleoptera
bacteria can degrade malathion, pirimiphos-methyl, and deltamethrin and utilize these insecticides as the carbon source in vitro.
0.24%
17.8
Proteus vulgaris
RISB0001
Leptinotarsa decemlineata
Order: Coleoptera
produces toxic hydrogen cyanide (HCN) and a mandelonitrile-producing cyanoglucoside, amygdalin, which protect the insect from predation
0.05%
17.8
Bacillus sp. BS98
RISB1645
Osphranteria coerulescens
Order: Coleoptera
The isolate has cellulolytic activity and can hydrolyze CMC, avicel, cellulose and sawdust with broad temperature and pH stability
0.05%
17.7
Enterococcus faecalis
RISB0374
Tribolium castaneum
Order: Coleoptera
modulates host phosphine resistance by interfering with the redox system
1.13%
17.6
Staphylococcus gallinarum
RISB0946
Callosobruchus maculatus
Order: Coleoptera
The strain encodes complete biosynthetic pathways for the production of B vitamins and amino acids, including tyrosine
0.03%
17.4
Serratia marcescens
RISB1295
Nicrophorus vespilloides
Order: Coleoptera
producing antibacterial compound Serrawettin W2, which has antibacterial and nematode-inhibiting effects
0.04%
17.1
Lactococcus lactis
RISB1430
Rhynchophorus ferrugineus
Order: Coleoptera
promote the development and body mass gain of RPW larvae by improving their nutrition metabolism
0.17%
17.1
Paludibacter propionicigenes
RISB2055
Odontotaenius disjunctus
Order: Coleoptera
microbial fixation of nitrogen that is important for this beetle to subsist on woody biomass
0.09%
16.9
Morganella morganii
RISB1548
Costelytra zealandica
Order: Coleoptera
symbionts residing in the colleterial glands produce phenol 1 as the female sex pheromone
0.04%
16.8
Streptomyces sp. WAC00303
RISB0777
Copris tripartitus
Order: Coleoptera
contribute brood ball hygiene by inhibiting fungal parasites in the environment
0.24%
16.8
Serratia marcescens
RISB0365
Pagiophloeus tsushimanus
Order: Coleoptera
terpenoid-degrading: the highest degradation rates of D-camphor, linalool, and eucalyptol
0.04%
16.8
Morganella morganii
RISB1868
Costelytra zealandica
Order: Coleoptera
produces phenol as the sex pheromone of the host from tyrosine in the colleterial gland
0.04%
16.8
Stenotrophomonas maltophilia
RISB0139
Tenebrio molitor
Order: Coleoptera
correlated with polyvinyl chloride PVC degradation
0.78%
16.8
Streptomyces sp. NBC_00162
RISB0777
Copris tripartitus
Order: Coleoptera
contribute brood ball hygiene by inhibiting fungal parasites in the environment
0.07%
16.7
Paenibacillus sp. FSL E2-0201
RISB0813
Hypothenemus hampei
Order: Coleoptera
might contribute to caffeine breakdown using the C-9 oxidation pathway
0.13%
16.5
Paenibacillus sp. PK4536
RISB0813
Hypothenemus hampei
Order: Coleoptera
might contribute to caffeine breakdown using the C-9 oxidation pathway
0.10%
16.5
Paenibacillus sp. CAA11
RISB0813
Hypothenemus hampei
Order: Coleoptera
might contribute to caffeine breakdown using the C-9 oxidation pathway
0.07%
16.5
Klebsiella pneumoniae
RISB1153
Tenebrio molitor
Order: Coleoptera
degrading plastics
1.00%
16.4
Serratia marcescens
RISB1158
Nicrophorus vespilloides
Order: Coleoptera
produces an antibacterial cyclic lipopeptide called serrawettin W2
0.04%
16.4
Paludibacter propionicigenes
RISB2056
Odontotaenius disjunctus
Order: Coleoptera
plays an important role in nitrogen fixation
0.09%
16.0
Citrobacter koseri
RISB1060
Oryctes rhinoceros
Order: Coleoptera
associated with insect digestive tracts
0.02%
15.8
Enterobacter asburiae
RISB1150
Plodia interpunctella
Order: Coleoptera
damaged polyethylene (PE) films
0.03%
15.7
Staphylococcus hominis
RISB1071
Oryctes rhinoceros
Order: Coleoptera
gut microbe
0.22%
15.4
Lactococcus lactis
RISB1065
Oryctes rhinoceros
Order: Coleoptera
gut microbe
0.17%
15.4
Exiguobacterium sp. MH3
RISB1152
Tenebrio molitor
Order: Coleoptera
degrading plastics
0.02%
15.4
Lysinibacillus fusiformis
RISB1066
Oryctes rhinoceros
Order: Coleoptera
gut microbe
0.04%
15.3
Burkholderia
RISB1172
Lagria villosa
Order: Coleoptera
process a cryptic gene cluster that codes for the biosynthesis of a novel antifungal polyketide with a glutarimide pharmacophore, which led to the discovery of the gladiofungins as previously-overlooked components of the antimicrobial armory of the beetle symbiont
0.07%
15.1
Pantoea agglomerans
RISB1858
Lissorhoptrus oryzophilus
Order: Coleoptera
None
0.04%
15.0
Burkholderia
RISB1729
Lagria hirta
Order: Coleoptera
the symbionts inhibit the growth of antagonistic fungi on the eggs of the insect host, indicating that the Lagria-associated Burkholderia have evolved from plant pathogenic ancestors into insect defensive mutualists
0.07%
14.4
Burkholderia
RISB1836
Dendroctonus valens
Order: Coleoptera
It can trongly degrade naringenin, and pinitol, the main soluble carbohydrate of P. tabuliformis, is retained in L. procerum-infected phloem and facilitate naringenin biodegradation by the microbiotas.
0.07%
14.1
Sphingobium
RISB1837
Dendroctonus valens
Order: Coleoptera
It can trongly degrade naringenin, and pinitol, the main soluble carbohydrate of P. tabuliformis, is retained in L. procerum-infected phloem and facilitate naringenin biodegradation by the microbiotas.
0.03%
14.1
Sodalis
RISB2035
Sitophilus oryzae
Order: Coleoptera
endosymbiont dynamics parallels numerous transcriptional changes in weevil developing adults and affects several biological processes, including metabolism and development
0.04%
13.5
Raoultella
RISB2226
Leptinotarsa decemlineata
Order: Coleoptera
Colorado potato beetle (Leptinotarsa decemlineata) larvae exploit bacteria in their oral secretions to suppress antiherbivore defenses in tomato (Solanum lycopersicum)
0.09%
13.4
Wolbachia
RISB1452
Octodonta nipae
Order: Coleoptera
Wolbachia harbored dominantly in a female than the male adult, while, no significant differences were observed between male and female body parts and tissues
0.25%
13.4
Sodalis
RISB2607
Sitophilus oryzae
Order: Coleoptera
induces the specific differentiation of the bacteriocytes, increases mitochondrial oxidative phosphorylation through the supply of pantothenic acid and riboflavin
0.04%
13.3
Sodalis
RISB1718
Sitophilus zeamais
Order: Coleoptera
we investigated the role of a quorum sensing(QS ) system in S. praecaptivus and found that it negatively regulates a potent insect-killing phenotype
0.04%
13.0
Bacteroides
RISB1183
Oryzaephilus surinamensis
Order: Coleoptera
supplement precursors for the cuticle synthesis and thereby enhance desiccation resistance of its host
0.65%
12.7
Wolbachia
RISB2107
Sitophilus zeamais
Order: Coleoptera
Wolbachia directly favored weevil fertility and exhibited only mild indirect effects, usually enhancing the SZPE effect
0.25%
12.6
Vibrio
RISB1810
Monochamus galloprovincialis
Order: Coleoptera
Have the ability for degradation of cellulose, proteins and starch
1.07%
12.4
Candidatus Nardonella
RISB2449
Euscepes postfasciatus
Order: Coleoptera
endosymbiont is involved in normal growth and development of the host weevil
0.84%
12.4
Candidatus Nardonella
RISB1931
Lissorhoptrus oryzophilus
Order: Coleoptera
might be not playing critical roles in the reproduction of L. oryzophilus
0.84%
12.3
Wolbachia
RISB1282
Ips sp.
Order: Coleoptera
inducing cytoplasmic incompatibility, resulting in reproductive distortions and hence
0.25%
12.0
Nostoc
RISB0812
Hypothenemus hampei
Order: Coleoptera
might contribute to caffeine breakdown using the C-18 oxidation pathway
0.45%
11.9
Candidatus Nardonella
RISB1668
Multiple species
Order: Coleoptera
Possibly tyrosine precursor provisioning
0.84%
11.6
Bradyrhizobium
RISB0135
Coccinella septempunctata
Order: Coleoptera
be commonly found in plant roots and they all have nitrogen fixation abilities
0.07%
11.6
Rhizobium
RISB0135
Coccinella septempunctata
Order: Coleoptera
be commonly found in plant roots and they all have nitrogen fixation abilities
0.06%
11.6
Leuconostoc
RISB0812
Hypothenemus hampei
Order: Coleoptera
might contribute to caffeine breakdown using the C-18 oxidation pathway
0.07%
11.5
Halomonas
RISB1808
Monochamus galloprovincialis
Order: Coleoptera
Have the ability for degradation of cellulose, proteins and starch
0.07%
11.4
Candidatus Mesenet
RISB1785
Brontispa longissima
Order: Coleoptera
induced complete Cytoplasmic incompatibility (CI) (100% mortality)
0.01%
11.3
Raoultella
RISB1007
Monochamus alternatus
Order: Coleoptera
may help M. alternatus degrade cellulose and pinene
0.09%
11.1
Klebsiella pneumoniae
RISB2185
Scirpophaga incertulas
Order: Lepidoptera
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases that are secreted by gut microbiota to digest the structural and recalcitrant lignocellulosic residues in their foods.
1.00%
11.0
Cronobacter
RISB0247
Tenebrio molitor
Order: Coleoptera
may be indirectly involved in the digestion of PE
0.02%
11.0
Mycobacterium
RISB1156
Nicrophorus concolor
Order: Coleoptera
produces Antimicrobial compounds
0.06%
10.7
Turicibacter
RISB0451
Odontotaenius disjunctus
Order: Coleoptera
degrading  ellulose and xylan
0.06%
10.6
Escherichia coli
RISB1339
Manduca sexta
Order: Lepidoptera
modulate immunity-related gene expression in the infected F0 larvae, and also in their offspring, triggered immune responses in the infected host associated with shifts in both DNA methylation and histone acetylation
1.18%
10.5
Aeromonas
RISB1145
Tenebrio molitor
Order: Coleoptera
degrading plastics
0.11%
10.5
Kluyvera
RISB1064
Oryctes rhinoceros
Order: Coleoptera
gut microbe
0.03%
10.3
Francisella tularensis
RISB1907
Bombyx mori
Order: Lepidoptera
After infection with F. tularensis, the induction of melanization and nodulation, which are immune responses to bacterial infection, were inhibited in silkworms. Pre-inoculation of silkworms with F. tularensis enhanced the expression of antimicrobial peptides and resistance to infection by pathogenic bacteria.
0.13%
10.1
Candidatus Pantoea carbekii
RISB1046
Halyomorpha halys
Order: Hemiptera
provides its host with essential nutrients, vitamins, cofactors and protection of the most vulnerable stages of early development (1st nymphal stages). Pantoea carbekii is highly stress tolerant, especially once secreted to cover the eggs, by its unique biofilm-formation properties, securing host offspring survival
0.07%
10.1
Listeria monocytogenes
RISB2308
Drosophila melanogaster
Order: Diptera
L. monocytogenes infection disrupts host energy metabolism by depleting energy stores (triglycerides and glycogen) and reducing metabolic pathway activity (beta-oxidation and glycolysis). The infection affects antioxidant defense by reducing uric acid levels and alters amino acid metabolism. These metabolic changes are accompanied by melanization, potentially linked to decreased tyrosine levels.
0.07%
10.1
Arsenophonus sp. aPb
RISB1047
Aphis gossypii
Order: Hemiptera
secondary symbiont reduction led to reduction of the total life span and intrinsic rate of natural increase as well as appearance of the deformed dead offspring. H. defensa and Arsenophonus contributed to the fitness of A. gossypii by enhancing its performance, but not through parasitoid resistance.
0.05%
10.1
Pantoea agglomerans
RISB2197
Termitidae
Order: Blattodea
The ability of these arthropods to feed on wood, foliage and detritus is likely to involve catalysis by different types of cellulases/hemicellulases that are secreted by gut microbiota to digest the structural and recalcitrant lignocellulosic residues in their foods.
0.04%
10.0
Micromonospora
RISB2034
Harpalus sinicus
Order: Coleoptera
None
0.03%
10.0
Candidatus Hamiltonella defensa
RISB1049
Aphis gossypii
Order: Hemiptera
secondary symbiont reduction led to reduction of the total life span and intrinsic rate of natural increase as well as appearance of the deformed dead offspring. H. defensa and Arsenophonus contributed to the fitness of A. gossypii by enhancing its performance, but not through parasitoid resistance.
0.02%
10.0
Dysgonomonas
RISB1481
Brachinus elongatulus
Order: Coleoptera
None
0.02%
10.0
Gilliamella apicola
RISB0102
Apis mellifera
Order: Hymenoptera
Gilliamella apicola carries the gene for the desaturase FADS2, which is able to metabolize polyunsaturated fatty acids from pollen and synthesize endocannabinoid, a lipogenic neuroactive substance, thereby modulating reward learning and memory in honeybees.
0.01%
10.0
Arsenophonus sp. aPb
RISB1300
Aphis gossypii
Order: Hemiptera
Arsenophonus sp. can have different effects on its hosts, including obligate mutualism in blood-sucking insects, improving the performance of whiteflies, or through facultative mutualism by protecting psyllids against parasitoid attacks.
0.05%
9.8
Stenotrophomonas maltophilia
RISB1122
Bombyx mori
Order: Lepidoptera
facilitate host resistance against organophosphate insecticides, provides essential amino acids that increase host fitness and allow the larvae to better tolerate the toxic effects of the insecticide.
0.78%
9.8
Candidatus Hamiltonella defensa
RISB1296
Sitobion miscanthi
Order: Hemiptera
Increase the reproductive capacity of wheat aphids, increase the number of offspring and reduce the age of first breeding, suppressed the salicylic acid (SA)- and jasmonic acid (JA)-related defense pathways and SA/JA accumulation
0.02%
9.6
Candidatus Nasuia deltocephalinicola
RISB2283
Nephotettix cincticeps
Order: Hemiptera
Oral administration of tetracycline to nymphal N. cincticeps resulted in retarded growth, high mortality rates, and failure in adult emergence, suggesting important biological roles of the symbionts for the host insect
0.02%
9.4
Clostridium sp. DL-VIII
RISB2301
Pyrrhocoris apterus
Order: Hemiptera
could play an important role for the insect by degrading complex dietary components, providing nutrient supplementation, or detoxifying noxious chemicals (e.g. cyclopropenoic fatty acids or gossypol) in the diet
0.07%
9.3
Clostridium sp. OS1-26
RISB2301
Pyrrhocoris apterus
Order: Hemiptera
could play an important role for the insect by degrading complex dietary components, providing nutrient supplementation, or detoxifying noxious chemicals (e.g. cyclopropenoic fatty acids or gossypol) in the diet
0.06%
9.3
Clostridium sp. MB40-C1
RISB2301
Pyrrhocoris apterus
Order: Hemiptera
could play an important role for the insect by degrading complex dietary components, providing nutrient supplementation, or detoxifying noxious chemicals (e.g. cyclopropenoic fatty acids or gossypol) in the diet
0.04%
9.3
Candidatus Schneideria nysicola
RISB0872
Nysius sp.
Order: Hemiptera
synthesize four B vitamins(Pan, pantothenate;Fol, folate; Rib, riboflavin; Pyr, pyridoxine) and five Essential Amino Acids(Ile, isoleucine; Val, valine; Lys, lysine; Thr, threonine; Phe, phenylalanine)
0.15%
9.2
Mammaliicoccus sciuri
RISB0075
Bombyx mori
Order: Lepidoptera
could produce a secreted chitinolytic lysozyme (termed Msp1) to damage fungal cell walls,completely inhibit the spore germination of fungal entomopathogens Metarhizium robertsii and Beauveria bassiana
0.17%
9.2
Candidatus Hamiltonella defensa
RISB0630
Acyrthosiphon pisum
Order: Hemiptera
In response to ladybirds, symbiont-infected pea aphids exhibited proportionately fewer evasive defences (dropping and walking away) than non-infected (cured) pea aphids, but more frequent aggressive kicking
0.02%
9.1
Candidatus Carsonella ruddii
RISB0394
Cacopsylla pyricola
Order: Hemiptera
Carsonella produces most essential amino acids (EAAs) for C. pyricola, Psyllophila complements the genes missing in Carsonella for the tryptophan pathway and synthesizes some vitamins and carotenoids
0.16%
9.1
Enterobacter ludwigii
RISB1543
Helicoverpa zea
Order: Lepidoptera
two immunity-related genes glucose oxidase (GOX) and lysozyme (LYZ) were more highly expressed in both salivary glands and midguts compared with MgCl2 solution-treated caterpillars
0.07%
8.7
Blattabacterium cuenoti
RISB0133
Panesthiinae
Order: Blattodea
enables hosts to subsist on a nutrient-poor diet; endosymbiont genome erosions are associated with repeated host transitions to an underground life
0.59%
8.5
Candidatus Portiera aleyrodidarum
RISB1193
Bemisia tabaci
Order: Hemiptera
synthesizing essential amino acid (e.g. tryptophan, leucine and L-Isoleucine), Bemisia tabaci provides vital nutritional support for growth, development and reproduction
0.13%
8.5
Stenotrophomonas maltophilia
RISB1227
Delia antiqua
Order: Diptera
six bacteria protect larvae from infection with the entomopathogen Beauveria bassiana through symbiotic bacterium-derived organic acids
0.78%
8.5
Candidatus Mikella endobia
RISB1887
Paracoccus marginatus
Order: Hemiptera
a nested symbiotic arrangement, where one bacterium lives inside another bacterium,occurred in building the mosaic metabolic pathways seen in mitochondria and plastids
0.11%
8.5
Lactobacillus sp. ESL0785
RISB0292
Lymantria dispar asiatica
Order: Lepidoptera
Beauveria bassiana infection-based assays showed that the mortality of non-axenic L. dispar asiatica larvae was significantly higher than that of axenic larvae at 72 h.
0.05%
8.4
Lactobacillus sp. PV034
RISB0292
Lymantria dispar asiatica
Order: Lepidoptera
Beauveria bassiana infection-based assays showed that the mortality of non-axenic L. dispar asiatica larvae was significantly higher than that of axenic larvae at 72 h.
0.02%
8.4
Candidatus Gullanella endobia
RISB1885
Ferrisia virgata
Order: Hemiptera
a nested symbiotic arrangement, where one bacterium lives inside another bacterium,occurred in building the mosaic metabolic pathways seen in mitochondria and plastids
0.02%
8.4
Candidatus Hoaglandella endobia
RISB1886
Trionymus perrisii
Order: Hemiptera
a nested symbiotic arrangement, where one bacterium lives inside another bacterium,occurred in building the mosaic metabolic pathways seen in mitochondria and plastids
0.01%
8.4
Spiroplasma sp. TIUS-1
RISB1353
Cephus cinctus
Order: Hymenoptera
The bacterium also encoded biosynthetic pathways for essential vitamins B2, B3, and B9. We identified putative Spiroplasma virulence genes: cardiolipin and chitinase.
0.01%
8.3
Arthrobacter sp. PGP41
RISB0769
Delia antiqua
Order: Diptera
showed significant volatile inhibition activity against fungal entomopathogen Fusarium moniliforme, Botryosphaeria dothidea and both Fusarium oxysporum respectively
0.02%
8.3
Arthrobacter sp. zg-Y1110
RISB0769
Delia antiqua
Order: Diptera
showed significant volatile inhibition activity against fungal entomopathogen Fusarium moniliforme, Botryosphaeria dothidea and both Fusarium oxysporum respectively
0.01%
8.3
Wigglesworthia glossinidia
RISB0369
Glossina morsitans
Order: Diptera
symbiont-derived factors, likely B vitamins, are critical for the proper function of both lipid biosynthesis and lipolysis to maintain tsetse fly fecundity
0.11%
8.2
Arsenophonus sp. aPb
RISB1048
Aphis gossypii
Order: Hemiptera
symbiont reduction led to reduction of the total life span and intrinsic rate of natural increase as well as appearance of the deformed dead offspring
0.05%
8.1
Candidatus Profftella armatura (Diaphorina cf. continua)
RISB2147
Diaphorina citri
Order: Hemiptera
a defensive symbiont presumably of an obligate nature, which encoded horizontally acquired genes for synthesizing a novel polyketide toxin, diaphorin
0.01%
8.0
Spiroplasma poulsonii
RISB1346
Drosophila melanogaster
Order: Diptera
S. poulsonii protects its host against parasitoid wasps and nematodes by the action of toxins from the family of Ribosome Inactivating Proteins
0.02%
7.9
Enterobacter ludwigii
RISB1223
Delia antiqua
Order: Diptera
six bacteria protect larvae from infection with the entomopathogen Beauveria bassiana through symbiotic bacterium-derived organic acids
0.07%
7.8
Candidatus Profftella armatura (Diaphorina cf. continua)
RISB2005
Diaphorina citri
Order: Hemiptera
produce proteins involved in polyketide biosynthesis,which were up-regulated in CLas(+) insects (associated with citrus greening disease)
0.01%
7.8
Exiguobacterium sp. MH3
RISB0007
Phormia regina
Order: Diptera
prompted oviposition by flies; The flies' oviposition decisions appear to be guided by bacteria-derived semiochemicals as the bacteria
0.02%
7.7
Spiroplasma poulsonii
RISB2264
Drosophila melanogaster
Order: Diptera
Spiroplasma coopts the yolk transport and uptake machinery to colonize the germ line and ensure efficient vertical transmission
0.02%
7.6
Carnobacterium maltaromaticum
RISB1693
Plutella xylostella
Order: Lepidoptera
play an important role in the breakdown of plant cell walls, detoxification of plant phenolics, and synthesis of amino acids.
0.03%
7.5
Candidatus Nasuia deltocephalinicola
RISB2282
Nephotettix cincticeps
Order: Hemiptera
With the antibiotic, nymphal growth was remarkably retarded, and a number of nymphs either died or failed to attain adulthood
0.02%
7.5
Candidatus Tachikawaea gelatinosa
RISB2112
Urostylis westwoodii
Order: Hemiptera
the symbiont localizes to a specialized midgut region and supplies essential amino acids deficient in the host's diet
0.16%
7.5
Psychrobacter sp. WY6
RISB1773
Calliphoridae
Order: Diptera
it shows physiological adaptation to survival in warmer temperatures and has been previously associated with food spoilage
0.06%
7.5
Psychrobacter sp. LV10R520-6
RISB1773
Calliphoridae
Order: Diptera
it shows physiological adaptation to survival in warmer temperatures and has been previously associated with food spoilage
0.01%
7.5
Candidatus Profftella armatura (Diaphorina cf. continua)
RISB2146
Diaphorina citri
Order: Hemiptera
encoded horizontally acquired genes for synthesizing a novel polyketide toxin, providing defense against natural enemies
0.01%
7.4
Candidatus Portiera aleyrodidarum
RISB2289
Bemisia tabaci
Order: Hemiptera
encoding the capability to synthetize, or participate in the synthesis of, several amino acids and carotenoids,
0.13%
7.4
Candidatus Nasuia deltocephalinicola
RISB0262
Maiestas dorsalis
Order: Hemiptera
are responsible for synthesizing two essential amino acids (histidine and methionine) and riboflavin (vitamin B2)
0.02%
7.3
Candidatus Ishikawella capsulata
RISB2368
Megacopta punctatissima
Order: Hemiptera
Microbe compensates for nutritional deficiency of host diet by supplying essential amino acids
0.30%
7.2
Wigglesworthia glossinidia
RISB1786
Glossina morsitans
Order: Diptera
Synthesis of a large number of B vitamins, to supplement the host nutritional deficiencies of the diet
0.11%
7.2
Candidatus Portiera aleyrodidarum
RISB1973
Bemisia tabaci
Order: Hemiptera
a primary symbiont, which compensates for the deficient nutritional composition of its food sources
0.13%
7.1
Apilactobacillus kunkeei
RISB0475
Apis mellifera
Order: Hymenoptera
A. kunkeei alleviated acetamiprid-induced symbiotic microbiota dysregulation and mortality in honeybees
0.01%
7.1
Escherichia coli
RISB2120
Galleria mellonella
Order: Lepidoptera
mediate trans-generational immune priming
1.18%
7.0
Snodgrassella alvi
RISB1423
Bombus spp.
Order: Hymenoptera
The bumble bee microbiome slightly increases survivorship when the host is exposed to selenate
0.01%
6.9
Leclercia adecarboxylata
RISB1757
Spodoptera frugiperda
Order: Lepidoptera
degradation of lambda-cyhalothrin, deltamethrin, chlorpyrifos ethyl, lufenuron and spinosyn
0.03%
6.9
Sphingomonas sp. CV7422
RISB0134
Spodoptera frugiperda
Order: Lepidoptera
provide a protective effect to against chlorantraniliprole stress to S. frugiperda
0.02%
6.7
Carnobacterium maltaromaticum
RISB1692
Plutella xylostella
Order: Lepidoptera
participate in the synthesis of host lacking amino acids histidine and threonine
0.03%
6.6
Candidatus Westeberhardia cardiocondylae
RISB1794
Cardiocondyla obscurior
Order: Hymenoptera
Contributes to cuticle formation and is responsible for host invasive success
0.09%
6.6
Frischella perrara
RISB2028
Diceroprocta semicincta
Order: Hemiptera
causes the formation of a scab-like structure on the gut epithelium of its host
0.02%
6.6
Xenorhabdus bovienii
RISB2270
Acyrthosiphon pisum
Order: Hemiptera
have the gene PIN1 encoding the protease inhibitor protein against aphids
0.01%
6.5
Blattabacterium cuenoti
RISB0518
Cryptocercus punctulatus
Order: Blattodea
collaborative arginine biosynthesis
0.59%
6.3
Delftia lacustris
RISB1754
Spodoptera frugiperda
Order: Lepidoptera
may influence the metabolization of pesticides in insects
0.14%
6.3
Wigglesworthia glossinidia
RISB2577
Glossina brevipalpis
Order: Diptera
provide its tsetse host with metabolites such as vitamins
0.11%
6.3
Leclercia adecarboxylata
RISB1758
Spodoptera frugiperda
Order: Lepidoptera
may influence the metabolization of pesticides in insects
0.03%
6.2
Candidatus Westeberhardia cardiocondylae
RISB1795
Cardiocondyla obscurior
Order: Hymenoptera
a contribution of Westeberhardia to cuticle formation
0.09%
6.2
Candidatus Riesia pediculicola
RISB2452
Pediculus humanus humanus
Order: Phthiraptera
supplement body lice nutritionally deficient blood diet
0.03%
6.1
Lactiplantibacillus plantarum
RISB0674
Drosophila melanogaster
Order: Diptera
could effectively inhibit fungal spore germinations
0.11%
6.1
Candidatus Ishikawella capsulata
RISB2543
Megacopta punctatissima
Order: Hemiptera
Enhance pest status of the insect host
0.30%
6.1
Proteus vulgaris
RISB2460
Bombyx mori
Order: Lepidoptera
degradation of cellulose, xylan, pectin and starch
0.05%
6.1
Lysinibacillus fusiformis
RISB1417
Psammotermes hypostoma
Order: Blattodea
isolates showed significant cellulolytic activity
0.04%
6.0
Blattabacterium cuenoti
RISB0093
Blattella germanica
Order: Blattodea
obligate endosymbiont
0.59%
6.0
Providencia rettgeri
RISB1001
Anastrepha obliqua
Order: Diptera
improve the sexual competitiveness of males
0.08%
5.9
Carnobacterium maltaromaticum
RISB1691
Plutella xylostella
Order: Lepidoptera
activity of cellulose and hemicellulose
0.03%
5.8
Providencia sp. 21OH12SH02B-Prov
RISB1574
Bactrocera tau
Order: Diptera
could attract male and female B. tau
0.06%
5.8
Candidatus Cardinium hertigii
RISB2288
Encarsia pergandiella
Order: Hymenoptera
cause cytoplasmic incompatibility (CI)
0.02%
5.8
Providencia sp. 21OH12SH02B-Prov
RISB0984
Nasonia vitripennis
Order: Hymenoptera
may highly associated with diapause
0.06%
5.8
Salmonella enterica
RISB0413
Melanaphis sacchari
Order: Hemiptera
None
0.71%
5.7
Chryseobacterium sp. JV274
RISB2092
Aedes aegypti
Order: Diptera
axenic larvae cannot develop
0.06%
5.6
Chryseobacterium sp. CY350
RISB2092
Aedes aegypti
Order: Diptera
axenic larvae cannot develop
0.05%
5.6
Chryseobacterium sp. Y16C
RISB2092
Aedes aegypti
Order: Diptera
axenic larvae cannot develop
0.04%
5.6
Agrobacterium tumefaciens
RISB0650
Melanaphis bambusae
Order: Hemiptera
None
0.35%
5.4
Treponema
RISB2377
termite
Order: Blattodea
when grown together, two termite-gut Treponema species influence each other's gene expression in a far more comprehensive and nuanced manner than might have been predicted based on the results of previous studies on the respective pure cultures
0.47%
5.4
Candidatus Annandia adelgestsuga
RISB2207
Adelges tsugae
Order: Hemiptera
None
0.33%
5.3
Comamonas testosteroni
RISB1875
Aedes aegypti
Order: Diptera
gut microbiome
0.02%
5.3
Candidatus Erwinia haradaeae
RISB1632
Lachninae
Order: Hemiptera
None
0.26%
5.3
Candidatus Palibaumannia cicadellinicola
RISB1594
Graphocephala coccinea
Order: Hemiptera
None
0.26%
5.3
Candidatus Annandia pinicola
RISB1661
Adelgidae
Order: Hemiptera
None
0.21%
5.2
Candidatus Blochmanniella pennsylvanica
RISB0254
Camponotus pennalicus
Order: Hymenoptera
None
0.18%
5.2
Candidatus Carsonella ruddii
RISB0748
Diaphorina citri
Order: Hemiptera
None
0.16%
5.2
Candidatus Karelsulcia muelleri
RISB1591
Philaenus spumarius
Order: Hemiptera
None
0.15%
5.2
Delftia lacustris
RISB0657
Melanaphis bambusae
Order: Hemiptera
None
0.14%
5.1
Lactiplantibacillus plantarum
RISB0608
Drosophila melanogaster
Order: Diptera
None
0.11%
5.1
Flavobacterium johnsoniae
RISB0659
Melanaphis bambusae
Order: Hemiptera
None
0.09%
5.1
Candidatus Legionella polyplacis
RISB1687
Polyplax serrata
Order: Phthiraptera
None
0.06%
5.1
Rickettsia typhi
RISB1906
Bemisia tabaci
Order: Hemiptera
None
0.05%
5.1
Candidatus Cardinium hertigii
RISB2548
Scaphoideus titanus
Order: Hemiptera
None
0.02%
5.0
Pectobacterium carotovorum
RISB1772
Muscidae
Order: Diptera
None
0.02%
5.0
Candidatus Megaera polyxenophila
RISB0587
Multiple species
Order: None
None
0.02%
5.0
Candidatus Regiella
RISB1370
Sitobion avenae
Order: Hemiptera
Regiella infection decreased the intrinsic rate of increase (rm) of aphids at 25 °C and 28 °C. However, at 31 °C, the effect of Regiella on the rm varied depending on the aphid genotype and density. Thus, the negative effects of this endosymbiont on its host were environmentally dependent.
0.02%
5.0
Gilliamella apicola
RISB1945
Apis cerana
Order: Hymenoptera
None
0.01%
5.0
Snodgrassella alvi
RISB1947
Apis cerana
Order: Hymenoptera
None
0.01%
5.0
Candidatus Regiella
RISB1819
Sitobion avenae
Order: Hemiptera
In R. insecticola-infected aphid lines, there were increases in plasticities for developmental times of first and second instar nymphs and for fecundity, showing novel functional roles of bacterial symbionts in plant-insect interactions.
0.02%
4.8
Apibacter
RISB0603
Apis cerana
Order: Hymenoptera
The acquisition of genes for the degradation of the toxic monosaccharides potentiates Apibacter with the ability to utilize the pollen hydrolysis products, at the same time enabling monosaccharide detoxification for the host
0.04%
4.5
Candidatus Regiella
RISB1363
Sitobion avenae
Order: Hemiptera
R. insecticola-infected aphids were more predated by the ladybird Hippodamia variegata irrespective of host plants and did not improve defences against coccinellid predators or metabolic rates on any host plants
0.02%
4.2
Rickettsiella
RISB2479
Acyrthosiphon pisum
Order: Hemiptera
changes the insects’ body color from red to green in natural populations, the infection increased amounts of blue-green polycyclic quinones, whereas it had less of an effect on yellow-red carotenoid pigments
0.03%
4.2
Xanthomonas
RISB0498
Xylocopa appendiculata
Order: Hymenoptera
Xanthomonas strain from Japanese carpenter bee is effective PU-degradable bacterium and is able to use polyacryl-based PU as a nutritional source, as well as other types of PS-PU and PE-PU
0.39%
4.2
Weissella
RISB1982
Blattella germanica
Order: Blattodea
gut microbiota contributes to production of VCAs that act as fecal aggregation agents and that cockroaches discriminate among the complex odors that emanate from a diverse microbial community
0.05%
3.9
Photorhabdus
RISB2532
Manduca sexta
Order: Lepidoptera
produces a small-molecule antibiotic (E)-1,3-dihydroxy-2-(isopropyl)-5-(2-phenylethenyl)benzene (ST) that also acts as an inhibitor of phenoloxidase (PO) in the insect host Manduca sexta.
0.08%
3.8
Rickettsiella
RISB2262
Acyrthosiphon pisum
Order: Hemiptera
against this entomopathogen Pandora neoaphidis, reduce mortality and also decrease fungal sporulation on dead aphids which may help protect nearby genetically identical insects
0.03%
3.6
Methylobacterium
RISB1440
Lutzomyia evansi
Order: Diptera
Methylobacterium can be important in several physiological and metabolic processes in Lu. evansi, which suggests that interactions could occur with Leishmania parasite
0.12%
3.5
Rickettsiella
RISB1739
Acyrthosiphon pisum
Order: Hemiptera
in an experiment with a single-injected isolate of Rickettsiella sp. wasps were also attracted to plants fed on by aphids without secondary symbionts
0.03%
3.0
Shewanella
RISB1924
Anopheles gambiae
Order: Diptera
may be related with mediating adaptation to different ecological niches or in shaping specific adult behaviors including mating
0.44%
3.0
Bacteroides
RISB0256
Leptocybe invasa
Order: Hymenoptera
Differences in Male-Killing Rickettsia Bacteria between Lineages of the Invasive Gall-Causing Pest Leptocybe invasa
0.65%
3.0
Photorhabdus
RISB2573
Manduca sexta
Order: Lepidoptera
the bacteria are symbiotic with entomopathogenic nematodes but become pathogenic on release from the nematode into the insect blood system
0.08%
2.8
Weissella
RISB0641
Formica
Order: Hymenoptera
exhibited abilities in catabolizing sugars (sucrose, trehalose, melezitose and raffinose) known to be constituents of hemipteran honeydew
0.05%
2.8
Bacteroides
RISB0090
Hyphantria cunea
Order: Lepidoptera
enhance the compatibility of invasive pests to new hosts and enable more rapid adaptation to new habitats.
0.65%
2.8
Streptococcus
RISB2625
Galleria mellonella
Order: Lepidoptera
suppress bacteria ingested with food by producing bacteriocin and by releasing a lysozyme like enzyme
0.61%
2.6
Bartonella
RISB1673
Apis mellifera
Order: Hymenoptera
a gut symbiont of insects and that the adaptation to blood-feeding insects facilitated colonization of the mammalian bloodstream
0.05%
2.6
Yersinia
RISB0492
Cimex hemipterus
Order: Hemiptera
the disruption of the abundant Yersinia possibly could be related to the enhanced susceptibility towards the insecticides
0.07%
2.5
Nocardia
RISB0947
Acromyrmex
Order: Hymenoptera
Pseudonocardia in the Acromyrmex leaf-cutter ants as a protective partner against the entomopathogenic fungus Metarhizium
0.04%
2.5
Xanthomonas
RISB0217
Xylocopa appendiculata
Order: Hymenoptera
strains biodegraded polyethylene terephthalate PET powder, broke it into its degradation products
0.39%
2.3
Liberibacter
RISB2310
Bactericerca cockerelli
Order: Hemiptera
manipulate plant signaling and defensive responses, suppress accumulation of defense transcripts like JA and SA
0.04%
2.3
Streptococcus
RISB2624
Reticulitermes flavipes
Order: Blattodea
can be broken down into substances such as carbon dioxide, ammonia and acetic acid
0.61%
2.3
Blautia
RISB0091
Hyphantria cunea
Order: Lepidoptera
enhance the compatibility of invasive pests to new hosts and enable more rapid adaptation to new habitats.
0.05%
2.2
Nocardia
RISB1218
Mycocepurus smithii
Order: Hymenoptera
produce secondary metabolites with antibiotic activity that protects the fungus garden against pathogens
0.04%
2.1
Streptococcus
RISB2604
Homona magnanima
Order: Lepidoptera
influence the growth of Bacillus thuringiensis in the larvae
0.61%
1.8
Candidatus Zinderia
RISB2451
Clastoptera arizonana
Order: Hemiptera
Zinderia had gene homologs for the production of tryptophan, methionine, and histidine
0.06%
1.8
Liberibacter
RISB2524
Bactericera cockerelli
Order: Hemiptera
Reduced expression of plant defensive gene in tomato probably for psyllid success
0.04%
1.7
Raoultella
RISB1672
Spodoptera frugiperda
Order: Lepidoptera
downregulated POX but upregulated trypsin PI in this plant species
0.09%
1.4
Paraclostridium
RISB0028
Sesamia inferens
Order: Lepidoptera
degrade Chlorpyrifos and Chlorantraniliprole in vitro
0.28%
1.3
Variovorax
RISB2153
Osmia bicornis
Order: Hymenoptera
may be essential to support Osmia larvae in their nutrient uptake
0.03%
1.3
Photorhabdus
RISB0532
Drosophila melanogaster
Order: Diptera
produces toxin complex (Tc) toxins as major virulence factors
0.08%
1.3
Dysgonomonas
RISB1235
Hermetia illucens
Order: Diptera
provides the tools for degrading of a broad range of substrates
0.02%
1.3
Peribacillus
RISB1877
Aedes aegypti
Order: Diptera
gut microbiome
0.90%
1.2
Liberibacter
RISB2333
Cacopsylla pyri
Order: Hemiptera
behaves as an endophyte rather than a pathogen
0.04%
1.0
Aeromonas
RISB2456
Bombyx mori
Order: Lepidoptera
able to utilize the CMcellulose and xylan
0.11%
0.9
Methylobacterium
RISB2053
Atractomorpha sinensis
Order: Orthoptera
associated with cellulolytic enzymes
0.12%
0.8
Gordonia
RISB1912
Hyles euphorbiae
Order: Lepidoptera
able to degrade alkaloids and/or latex
0.03%
0.8
Cedecea
RISB1570
Bactrocera tau
Order: Diptera
could attract male and female B. tau
0.01%
0.7
Priestia
RISB0839
Helicoverpa armigera
Order: Lepidoptera
producing amylase
0.39%
0.7
Aeromonas
RISB2086
Aedes aegypti
Order: Diptera
axenic larvae cannot develop
0.11%
0.7
Helicobacter
RISB0662
Melanaphis bambusae
Order: Hemiptera
None
0.51%
0.5
Treponema
RISB0169
Reticulitermes flaviceps
Order: Blattodea
None
0.47%
0.5
Methylobacterium
RISB2340
Saturniidae
Order: Lepidoptera
Nitrogen fixation
0.12%
0.5
Candidatus Zinderia
RISB1640
Clastoptera arizonana
Order: Hemiptera
Nitrogen-Fixing
0.06%
0.4
Sphingobium
RISB1880
Aedes aegypti
Order: Diptera
gut microbiome
0.03%
0.3
Candidatus Phytoplasma
RISB1620
Cacopsylla pyricola
Order: Hemiptera
None
0.19%
0.2
Methylorubrum
RISB0903
Myzus persicae
Order: Hemiptera
None
0.14%
0.1
Vagococcus
RISB0042
Aldrichina grahami
Order: Diptera
None
0.14%
0.1
Candidatus Profftia
RISB1664
Adelgidae
Order: Hemiptera
None
0.12%
0.1
Lonsdalea
RISB1321
Vespa mandarinia
Order: Hymenoptera
None
0.12%
0.1
Metabacillus
RISB0902
Myzus persicae
Order: Hemiptera
None
0.12%
0.1
Myroides
RISB0626
Musca altica
Order: Diptera
None
0.11%
0.1
Neisseria
RISB0512
Plutella xylostella
Order: Lepidoptera
None
0.10%
0.1
Cupriavidus
RISB0694
Alydus tomentosus
Order: Hemiptera
None
0.08%
0.1
Halomonas
RISB1374
Bemisia tabaci
Order: Hemiptera
None
0.07%
0.1
Yersinia
RISB0407
Anaphes nitens
Order: Hymenoptera
None
0.07%
0.1
Candidatus Arthromitus
RISB2613
Multiple species
Order: None
None
0.06%
0.1
Weissella
RISB1566
Liometopum apiculatum
Order: Hymenoptera
None
0.05%
0.1
Apibacter
RISB0604
Apis cerana
Order: Hymenoptera
None
0.04%
0.0
Micromonospora
RISB2033
Palomena viridissima
Order: Hemiptera
None
0.03%
0.0
Variovorax
RISB1712
Phlebotomus papatasi
Order: Diptera
None
0.03%
0.0
Ralstonia
RISB0243
Spodoptera frugiperda
Order: Lepidoptera
None
0.03%
0.0
Cedecea
RISB0504
Plutella xylostella
Order: Lepidoptera
None
0.01%
0.0
Weeksella
RISB1265
Rheumatobates bergrothi
Order: Hemiptera
None
0.01%
0.0

Download Files

Taxonomic Analysis Files

Kraken Report

Detailed taxonomic classification

Download
Krona HTML

Interactive taxonomic visualization

Download
Bracken Results

Species abundance estimation

Download

Assembly & Gene Prediction

Assembled Contigs

MEGAHIT assembly results

Download
Predicted Genes

Gene sequences (FASTA)

Download
Gene Annotation

GFF format annotation

Download

Genome Binning

MetaBAT2 Bins

Compressed genome bins

Download
Bin Information

Quality metrics and statistics

Download

Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR10017630
3.1 GB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Back to Metagenomes List
Back to Table