Metagenome

Our database currently contains 1494 metagenome samples, covering various insect species and their microbial communities across different geographical locations and sequencing platforms. The raw data were first quality-controlled using Fastp, followed by taxonomic composition analysis through the Kraken2 workflow. Visualization was performed using Krona. Additionally, the metagenomes were assembled into contigs using Megahit, and binning was conducted with the Metabat2 workflow. High-quality MAGs were extracted based on CheckM results.

1494 Total Samples

Geographical Distribution

Proportion of data based on geographical locations

Size Distribution

Distribution of metagenome sizes

Metagenomes

1494 records

Metagenome records associated with insect symbionts from public databases worldwide.

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Host Bioproject Sequencing Type Geographic Location Collection Year Details
SRR14298063

PRJNA721277

RNA-Seq

China - Asia

2014

SRR14298725

PRJNA721277

RNA-Seq

China - Asia

2014

SRR14300306

PRJNA721277

RNA-Seq

China - Asia

2014

SRR14633898

PRJNA345319

WGS

Burkina Faso - Africa

2010

SRR14744453

PRJNA735325

WGS

India - Asia

2020

SRR14744454

PRJNA735325

WGS

India - Asia

2020

SRR14744455

PRJNA735325

WGS

India - Asia

2020

SRR14744456

PRJNA735325

WGS

India - Asia

2020

SRR14744457

PRJNA735325

WGS

India - Asia

2020

SRR15069913

PRJNA744186

WGS

USA - North America

2005

SRR15069914

PRJNA744186

WGS

USA - North America

2013

SRR15069915

PRJNA744186

WGS

USA - North America

2013

SRR15166904

PRJNA742181

WGS

Sweden - Europe

2018

SRR15166905

PRJNA742181

WGS

Sweden - Europe

2018

SRR15166906

PRJNA742181

WGS

Sweden - Europe

2018

SRR15166907

PRJNA742181

WGS

Sweden - Europe

2018

SRR15166908

PRJNA742181

WGS

Sweden - Europe

2018

SRR15166909

PRJNA742181

WGS

Sweden - Europe

2018

SRR15166910

PRJNA742181

WGS

Sweden - Europe

2018

SRR15166911

PRJNA742181

WGS

Sweden - Europe

2018

SRR15166912

PRJNA742181

WGS

Sweden - Europe

2018

SRR15166913

PRJNA742181

WGS

Sweden - Europe

2018

SRR15166914

PRJNA742181

WGS

Sweden - Europe

2018

SRR15166915

PRJNA742181

WGS

Sweden - Europe

2018

SRR15166916

PRJNA742181

WGS

Sweden - Europe

2018

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