Metagenome

Our database currently contains 1494 metagenome samples, covering various insect species and their microbial communities across different geographical locations and sequencing platforms. The raw data were first quality-controlled using Fastp, followed by taxonomic composition analysis through the Kraken2 workflow. Visualization was performed using Krona. Additionally, the metagenomes were assembled into contigs using Megahit, and binning was conducted with the Metabat2 workflow. High-quality MAGs were extracted based on CheckM results.

1494 Total Samples

Geographical Distribution

Proportion of data based on geographical locations

Size Distribution

Distribution of metagenome sizes

Metagenomes

1494 records

Metagenome records associated with insect symbionts from public databases worldwide.

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Host Bioproject Sequencing Type Geographic Location Collection Year Details
SRR13786461

PRJNA704818

WGS

France - Europe

2015

SRR13786462

PRJNA704818

WGS

France - Europe

2015

SRR13786463

PRJNA704818

WGS

France - Europe

2015

SRR13786464

PRJNA704818

WGS

France - Europe

2015

SRR13786465

PRJNA704818

WGS

France - Europe

2015

SRR13786466

PRJNA704818

WGS

France - Europe

2015

SRR14128221

PRJNA719072

RNA-Seq

China - Asia

2014

SRR14132028

PRJNA719072

RNA-Seq

China - Asia

2014

SRR14132050

PRJNA719072

RNA-Seq

China - Asia

2014

SRR14139157

PRJNA719476

RNA-Seq

China - Asia

2014

SRR14139180

PRJNA719476

RNA-Seq

China - Asia

2014

SRR14139235

PRJNA719476

RNA-Seq

China - Asia

2014

SRR14139293

PRJNA719486

WGS

China - Asia

2019

SRR14139294

PRJNA719486

WGS

China - Asia

2019

SRR14139295

PRJNA719486

WGS

China - Asia

2019

SRR14139296

PRJNA719486

WGS

China - Asia

2019

SRR14139297

PRJNA719486

WGS

China - Asia

2019

SRR14139298

PRJNA719486

WGS

China - Asia

2019

SRR14141452

PRJNA719476

RNA-Seq

China - Asia

2014

SRR14141486

PRJNA719476

RNA-Seq

China - Asia

2014

SRR14141637

PRJNA719476

RNA-Seq

China - Asia

2014

SRR14141657

PRJNA719476

RNA-Seq

China - Asia

2014

SRR14141706

PRJNA719476

RNA-Seq

China - Asia

2014

SRR14141739

PRJNA719476

RNA-Seq

China - Asia

2014

SRR14141816

PRJNA719476

RNA-Seq

China - Asia

2014

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