Metagenome

Our database currently contains 1494 metagenome samples, covering various insect species and their microbial communities across different geographical locations and sequencing platforms. The raw data were first quality-controlled using Fastp, followed by taxonomic composition analysis through the Kraken2 workflow. Visualization was performed using Krona. Additionally, the metagenomes were assembled into contigs using Megahit, and binning was conducted with the Metabat2 workflow. High-quality MAGs were extracted based on CheckM results.

1494 Total Samples

Geographical Distribution

Proportion of data based on geographical locations

Size Distribution

Distribution of metagenome sizes

Metagenomes

1494 records

Metagenome records associated with insect symbionts from public databases worldwide.

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Host Bioproject Sequencing Type Geographic Location Collection Year Details
SRR6033685

PRJNA407112

WGS

Kenya - Africa

2015

SRR6033686

PRJNA407112

WGS

Kenya - Africa

2015

SRR6033687

PRJNA407112

WGS

USA - North America

2015

SRR6033688

PRJNA407112

WGS

Ukraine - Europe

2015

SRR6033689

PRJNA407112

WGS

USA - North America

2015

SRR6033690

PRJNA407112

WGS

USA - North America

2015

SRR6033691

PRJNA407112

WGS

USA - North America

2015

SRR6033692

PRJNA407112

WGS

USA - North America

2015

SRR6033693

PRJNA407112

WGS

Kenya - Africa

2015

SRR6130729

PRJNA412893

WGS

USA - North America

2016

SRR6130730

PRJNA412893

WGS

USA - North America

2016

SRR6130731

PRJNA412893

WGS

USA - North America

2016

SRR6130732

PRJNA412893

WGS

USA - North America

2016

SRR6130733

PRJNA412893

WGS

USA - North America

2016

SRR6130734

PRJNA412893

WGS

USA - North America

2016

SRR6130735

PRJNA412893

WGS

USA - North America

2016

SRR6130736

PRJNA412893

WGS

USA - North America

2016

SRR6130737

PRJNA412893

WGS

USA - North America

2016

SRR6130738

PRJNA412893

WGS

USA - North America

2016

SRR6130739

PRJNA412893

WGS

USA - North America

2016

SRR6130740

PRJNA412893

WGS

USA - North America

2016

SRR6130741

PRJNA412893

WGS

USA - North America

2016

SRR6130742

PRJNA412893

WGS

USA - North America

2016

SRR6130743

PRJNA412893

WGS

USA - North America

2016

SRR6130744

PRJNA412893

WGS

USA - North America

2016

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