Metagenome

Our database currently contains 1494 metagenome samples, covering various insect species and their microbial communities across different geographical locations and sequencing platforms. The raw data were first quality-controlled using Fastp, followed by taxonomic composition analysis through the Kraken2 workflow. Visualization was performed using Krona. Additionally, the metagenomes were assembled into contigs using Megahit, and binning was conducted with the Metabat2 workflow. High-quality MAGs were extracted based on CheckM results.

1494 Total Samples

Geographical Distribution

Proportion of data based on geographical locations

Size Distribution

Distribution of metagenome sizes

Metagenomes

1494 records

Metagenome records associated with insect symbionts from public databases worldwide.

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Host Bioproject Sequencing Type Geographic Location Collection Year Details
SRR6033660

PRJNA407112

WGS

Kenya - Africa

2015

SRR6033661

PRJNA407112

WGS

Kenya - Africa

2015

SRR6033662

PRJNA407112

WGS

Kenya - Africa

2015

SRR6033663

PRJNA407112

WGS

USA - North America

2015

SRR6033664

PRJNA407112

WGS

USA - North America

2015

SRR6033665

PRJNA407112

WGS

Nicaragua - North America

2015

SRR6033666

PRJNA407112

WGS

New Zealand - Oceania

2015

SRR6033667

PRJNA407112

WGS

New Zealand - Oceania

2015

SRR6033668

PRJNA407112

WGS

New Zealand - Oceania

2015

SRR6033669

PRJNA407112

WGS

New Zealand - Oceania

2015

SRR6033670

PRJNA407112

WGS

Nicaragua - North America

2015

SRR6033671

PRJNA407112

WGS

Panama - North America

2015

SRR6033672

PRJNA407112

WGS

Panama - North America

2015

SRR6033673

PRJNA407112

WGS

Kenya - Africa

2015

SRR6033674

PRJNA407112

WGS

Kenya - Africa

2015

SRR6033675

PRJNA407112

WGS

India - Asia

2015

SRR6033676

PRJNA407112

WGS

India - Asia

2015

SRR6033677

PRJNA407112

WGS

USA - North America

2015

SRR6033678

PRJNA407112

WGS

Georgia - Asia

2015

SRR6033679

PRJNA407112

WGS

USA - North America

2015

SRR6033680

PRJNA407112

WGS

India - Asia

2015

SRR6033681

PRJNA407112

WGS

India - Asia

2015

SRR6033682

PRJNA407112

WGS

India - Asia

2015

SRR6033683

PRJNA407112

WGS

Kenya - Africa

2015

SRR6033684

PRJNA407112

WGS

USA - North America

2015

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