Metagenome

Our database currently contains 1494 metagenome samples, covering various insect species and their microbial communities across different geographical locations and sequencing platforms. The raw data were first quality-controlled using Fastp, followed by taxonomic composition analysis through the Kraken2 workflow. Visualization was performed using Krona. Additionally, the metagenomes were assembled into contigs using Megahit, and binning was conducted with the Metabat2 workflow. High-quality MAGs were extracted based on CheckM results.

1494 Total Samples

Geographical Distribution

Proportion of data based on geographical locations

Size Distribution

Distribution of metagenome sizes

Metagenomes

1494 records

Metagenome records associated with insect symbionts from public databases worldwide.

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Host Bioproject Sequencing Type Geographic Location Collection Year Details
SRR6014792

PRJNA402054

WGS

France - Europe

2014

SRR6014793

PRJNA402054

WGS

France - Europe

2014

SRR6014794

PRJNA402054

WGS

Switzerland - Europe

2014

SRR6014795

PRJNA402054

WGS

Switzerland - Europe

2014

SRR6014796

PRJNA402054

WGS

France - Europe

2014

SRR6014797

PRJNA402054

WGS

Switzerland - Europe

2014

SRR6014798

PRJNA402054

WGS

Switzerland - Europe

2014

SRR6014799

PRJNA402054

WGS

Switzerland - Europe

2014

SRR6014800

PRJNA402054

WGS

Switzerland - Europe

2014

SRR6014801

PRJNA402054

WGS

Switzerland - Europe

2014

SRR6014802

PRJNA402054

WGS

Switzerland - Europe

2014

SRR6014803

PRJNA402054

WGS

Switzerland - Europe

2014

SRR6014830

PRJNA402054

WGS

France - Europe

2014

SRR6014831

PRJNA402054

WGS

France - Europe

2014

SRR6014832

PRJNA402054

WGS

France - Europe

2014

SRR6014833

PRJNA402054

WGS

France - Europe

2014

SRR6014834

PRJNA402054

WGS

France - Europe

2014

SRR6014835

PRJNA402054

WGS

France - Europe

2014

SRR6014836

PRJNA402054

WGS

France - Europe

2014

SRR6014837

PRJNA402054

WGS

France - Europe

2014

SRR6014838

PRJNA402054

WGS

France - Europe

2014

SRR6014839

PRJNA402054

WGS

France - Europe

2014

SRR6033657

PRJNA407112

WGS

Switzerland - Europe

2015

SRR6033658

PRJNA407112

WGS

Switzerland - Europe

2015

SRR6033659

PRJNA407112

WGS

Kenya - Africa

2015

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