Metagenome

Our database currently contains 1494 metagenome samples, covering various insect species and their microbial communities across different geographical locations and sequencing platforms. The raw data were first quality-controlled using Fastp, followed by taxonomic composition analysis through the Kraken2 workflow. Visualization was performed using Krona. Additionally, the metagenomes were assembled into contigs using Megahit, and binning was conducted with the Metabat2 workflow. High-quality MAGs were extracted based on CheckM results.

1494 Total Samples

Geographical Distribution

Proportion of data based on geographical locations

Size Distribution

Distribution of metagenome sizes

Metagenomes

1494 records

Metagenome records associated with insect symbionts from public databases worldwide.

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Host Bioproject Sequencing Type Geographic Location Collection Year Details
SRR6014741

PRJNA402054

WGS

Switzerland - Europe

2014

SRR6014751

PRJNA402054

WGS

France - Europe

2014

SRR6014754

PRJNA402054

WGS

France - Europe

2014

SRR6014755

PRJNA402054

WGS

France - Europe

2014

SRR6014756

PRJNA402054

WGS

France - Europe

2014

SRR6014757

PRJNA402054

WGS

France - Europe

2014

SRR6014764

PRJNA402054

WGS

France - Europe

2014

SRR6014766

PRJNA402054

WGS

Switzerland - Europe

2014

SRR6014767

PRJNA402054

WGS

Switzerland - Europe

2014

SRR6014768

PRJNA402054

WGS

Switzerland - Europe

2014

SRR6014769

PRJNA402054

WGS

Switzerland - Europe

2014

SRR6014770

PRJNA402054

WGS

Switzerland - Europe

2014

SRR6014771

PRJNA402054

WGS

Switzerland - Europe

2014

SRR6014772

PRJNA402054

WGS

Switzerland - Europe

2014

SRR6014773

PRJNA402054

WGS

Switzerland - Europe

2014

SRR6014774

PRJNA402054

WGS

Switzerland - Europe

2014

SRR6014775

PRJNA402054

WGS

Switzerland - Europe

2014

SRR6014782

PRJNA402054

WGS

France - Europe

2014

SRR6014785

PRJNA402054

WGS

France - Europe

2014

SRR6014786

PRJNA402054

WGS

France - Europe

2014

SRR6014787

PRJNA402054

WGS

France - Europe

2014

SRR6014788

PRJNA402054

WGS

Switzerland - Europe

2014

SRR6014789

PRJNA402054

WGS

Switzerland - Europe

2014

SRR6014790

PRJNA402054

WGS

Switzerland - Europe

2014

SRR6014791

PRJNA402054

WGS

Switzerland - Europe

2014

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