Metagenome

Our database currently contains 1494 metagenome samples, covering various insect species and their microbial communities across different geographical locations and sequencing platforms. The raw data were first quality-controlled using Fastp, followed by taxonomic composition analysis through the Kraken2 workflow. Visualization was performed using Krona. Additionally, the metagenomes were assembled into contigs using Megahit, and binning was conducted with the Metabat2 workflow. High-quality MAGs were extracted based on CheckM results.

1494 Total Samples

Geographical Distribution

Proportion of data based on geographical locations

Size Distribution

Distribution of metagenome sizes

Metagenomes

1494 records

Metagenome records associated with insect symbionts from public databases worldwide.

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Host Bioproject Sequencing Type Geographic Location Collection Year Details
SRR6014638

PRJNA402054

WGS

France - Europe

2014

SRR6014642

PRJNA402054

WGS

France - Europe

2014

SRR6014647

PRJNA402054

WGS

Switzerland - Europe

2014

SRR6014649

PRJNA402054

WGS

France - Europe

2014

SRR6014650

PRJNA402054

WGS

France - Europe

2014

SRR6014661

PRJNA402054

WGS

France - Europe

2014

SRR6014662

PRJNA402054

WGS

France - Europe

2014

SRR6014663

PRJNA402054

WGS

France - Europe

2014

SRR6014664

PRJNA402054

WGS

France - Europe

2014

SRR6014665

PRJNA402054

WGS

France - Europe

2014

SRR6014666

PRJNA402054

WGS

France - Europe

2014

SRR6014668

PRJNA402054

WGS

France - Europe

2014

SRR6014670

PRJNA402054

WGS

France - Europe

2014

SRR6014679

PRJNA402054

WGS

France - Europe

2014

SRR6014680

PRJNA402054

WGS

France - Europe

2014

SRR6014693

PRJNA402054

WGS

France - Europe

2014

SRR6014694

PRJNA402054

WGS

France - Europe

2014

SRR6014695

PRJNA402054

WGS

France - Europe

2014

SRR6014696

PRJNA402054

WGS

France - Europe

2014

SRR6014697

PRJNA402054

WGS

France - Europe

2014

SRR6014698

PRJNA402054

WGS

France - Europe

2014

SRR6014699

PRJNA402054

WGS

France - Europe

2014

SRR6014700

PRJNA402054

WGS

France - Europe

2014

SRR6014701

PRJNA402054

WGS

France - Europe

2014

SRR6014702

PRJNA402054

WGS

France - Europe

2014

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