Metagenome

Our database currently contains 1494 metagenome samples, covering various insect species and their microbial communities across different geographical locations and sequencing platforms. The raw data were first quality-controlled using Fastp, followed by taxonomic composition analysis through the Kraken2 workflow. Visualization was performed using Krona. Additionally, the metagenomes were assembled into contigs using Megahit, and binning was conducted with the Metabat2 workflow. High-quality MAGs were extracted based on CheckM results.

1494 Total Samples

Geographical Distribution

Proportion of data based on geographical locations

Size Distribution

Distribution of metagenome sizes

Metagenomes

1494 records

Metagenome records associated with insect symbionts from public databases worldwide.

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Host Bioproject Sequencing Type Geographic Location Collection Year Details
SRR6014560

PRJNA402054

WGS

France - Europe

2014

SRR6014561

PRJNA402054

WGS

France - Europe

2014

SRR6014562

PRJNA402054

WGS

France - Europe

2014

SRR6014563

PRJNA402054

WGS

France - Europe

2014

SRR6014564

PRJNA402054

WGS

France - Europe

2014

SRR6014565

PRJNA402054

WGS

France - Europe

2014

SRR6014566

PRJNA402054

WGS

France - Europe

2014

SRR6014567

PRJNA402054

WGS

France - Europe

2014

SRR6014568

PRJNA402054

WGS

France - Europe

2014

SRR6014569

PRJNA402054

WGS

France - Europe

2014

SRR6014570

PRJNA402054

WGS

France - Europe

2014

SRR6014571

PRJNA402054

WGS

France - Europe

2014

SRR6014580

PRJNA402054

WGS

France - Europe

2014

SRR6014594

PRJNA402054

WGS

France - Europe

2014

SRR6014605

PRJNA402054

WGS

France - Europe

2014

SRR6014614

PRJNA402054

WGS

France - Europe

2014

SRR6014615

PRJNA402054

WGS

France - Europe

2014

SRR6014616

PRJNA402054

WGS

France - Europe

2014

SRR6014617

PRJNA402054

WGS

France - Europe

2014

SRR6014620

PRJNA402054

WGS

France - Europe

2014

SRR6014621

PRJNA402054

WGS

France - Europe

2014

SRR6014622

PRJNA402054

WGS

France - Europe

2014

SRR6014625

PRJNA402054

WGS

France - Europe

2014

SRR6014627

PRJNA402054

WGS

France - Europe

2014

SRR6014632

PRJNA402054

WGS

France - Europe

2014

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