Metagenome

Our database currently contains 1494 metagenome samples, covering various insect species and their microbial communities across different geographical locations and sequencing platforms. The raw data were first quality-controlled using Fastp, followed by taxonomic composition analysis through the Kraken2 workflow. Visualization was performed using Krona. Additionally, the metagenomes were assembled into contigs using Megahit, and binning was conducted with the Metabat2 workflow. High-quality MAGs were extracted based on CheckM results.

1494 Total Samples

Geographical Distribution

Proportion of data based on geographical locations

Size Distribution

Distribution of metagenome sizes

Metagenomes

1494 records

Metagenome records associated with insect symbionts from public databases worldwide.

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Host Bioproject Sequencing Type Geographic Location Collection Year Details
SRR5940735

PRJNA385554

WGS

Singapore - Asia

2014

SRR5940736

PRJNA385554

WGS

Singapore - Asia

2014

SRR5940737

PRJNA385554

WGS

Singapore - Asia

2014

SRR5940738

PRJNA385554

WGS

Brazil - South America

2011

SRR5940739

PRJNA385554

WGS

Brazil - South America

2011

SRR5940740

PRJNA385554

WGS

USA - North America

2012

SRR5940741

PRJNA385554

WGS

USA - North America

2012

SRR5940742

PRJNA385554

WGS

USA - North America

2012

SRR5940743

PRJNA385554

WGS

USA - North America

2012

SRR5940744

PRJNA385554

WGS

Brazil - South America

2015

SRR5940745

PRJNA385554

WGS

Brazil - South America

2015

SRR5940746

PRJNA385554

WGS

Brazil - South America

2015

SRR5940747

PRJNA385554

WGS

Brazil - South America

2011

SRR5940748

PRJNA385554

WGS

Brazil - South America

2011

SRR5940749

PRJNA385554

WGS

Brazil - South America

2013

SRR5940750

PRJNA385554

WGS

Brazil - South America

2013

SRR5940751

PRJNA385554

WGS

Brazil - South America

2015

SRR5940752

PRJNA385554

WGS

Singapore - Asia

2014

SRR5940753

PRJNA385554

WGS

Singapore - Asia

2014

SRR5940754

PRJNA385554

WGS

Singapore - Asia

2014

SRR5940755

PRJNA385554

WGS

Singapore - Asia

2014

SRR5940756

PRJNA385554

WGS

Singapore - Asia

2014

SRR5940757

PRJNA385554

WGS

Brazil - South America

2015

SRR5940758

PRJNA385554

WGS

Brazil - South America

2015

SRR5940759

PRJNA385554

WGS

Brazil - South America

2013

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