Metagenome

Our database currently contains 1494 metagenome samples, covering various insect species and their microbial communities across different geographical locations and sequencing platforms. The raw data were first quality-controlled using Fastp, followed by taxonomic composition analysis through the Kraken2 workflow. Visualization was performed using Krona. Additionally, the metagenomes were assembled into contigs using Megahit, and binning was conducted with the Metabat2 workflow. High-quality MAGs were extracted based on CheckM results.

1494 Total Samples

Geographical Distribution

Proportion of data based on geographical locations

Size Distribution

Distribution of metagenome sizes

Metagenomes

1494 records

Metagenome records associated with insect symbionts from public databases worldwide.

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Host Bioproject Sequencing Type Geographic Location Collection Year Details
SRR3480636

PRJNA291435

WGS

Mexico - North America

2011

SRR3480637

PRJNA291435

WGS

Mexico - North America

2011

SRR3499626

PRJNA321195

WGS

USA - North America

2016

SRR3499627

PRJNA321195

WGS

USA - North America

2016

SRR3499628

PRJNA321195

WGS

USA - North America

2016

SRR3499630

PRJNA321195

WGS

USA - North America

2016

SRR3499631

PRJNA321195

WGS

USA - North America

2016

SRR3499632

PRJNA321195

WGS

USA - North America

2016

SRR3499633

PRJNA321195

WGS

USA - North America

2016

SRR3499634

PRJNA321195

WGS

USA - North America

2016

SRR3499636

PRJNA321195

WGS

USA - North America

2016

SRR3736771

PRJNA326914

WGS

Greece - Europe

2015

SRR3736772

PRJNA326914

WGS

Greece - Europe

2015

SRR3736773

PRJNA326914

WGS

Greece - Europe

2015

SRR3736774

PRJNA326914

WGS

Greece - Europe

2015

SRR3736775

PRJNA326914

WGS

Greece - Europe

2015

SRR3736776

PRJNA326914

WGS

Greece - Europe

2015

SRR3736777

PRJNA326914

WGS

Greece - Europe

2015

SRR3736778

PRJNA326914

WGS

Greece - Europe

2015

SRR3742170

PRJNA326914

WGS

Israel - Asia

2011

SRR3742171

PRJNA326914

WGS

Israel - Asia

2011

SRR5038971

PRJNA354118

RNA-Seq

China - Asia

2014

SRR5039436

PRJNA354118

RNA-Seq

China - Asia

2014

SRR5039445

PRJNA354118

RNA-Seq

China - Asia

2014

SRR5342614

PRJNA377711

WGS

Brazil - South America

2015

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