Metagenome

Our database currently contains 1494 metagenome samples, covering various insect species and their microbial communities across different geographical locations and sequencing platforms. The raw data were first quality-controlled using Fastp, followed by taxonomic composition analysis through the Kraken2 workflow. Visualization was performed using Krona. Additionally, the metagenomes were assembled into contigs using Megahit, and binning was conducted with the Metabat2 workflow. High-quality MAGs were extracted based on CheckM results.

1494 Total Samples

Geographical Distribution

Proportion of data based on geographical locations

Size Distribution

Distribution of metagenome sizes

Metagenomes

1494 records

Metagenome records associated with insect symbionts from public databases worldwide.

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Host Bioproject Sequencing Type Geographic Location Collection Year Details
SRR28387208

PRJNA1088476

WGS

Cameroon - Africa

2021

SRR28387209

PRJNA1088476

WGS

Cameroon - Africa

2021

SRR28387210

PRJNA1088476

WGS

Cameroon - Africa

2021

SRR28387211

PRJNA1088476

WGS

Cameroon - Africa

2021

SRR28387212

PRJNA1088476

WGS

Cameroon - Africa

2021

SRR28387213

PRJNA1088476

WGS

Cameroon - Africa

2021

SRR28387214

PRJNA1088476

WGS

Cameroon - Africa

2021

SRR28387215

PRJNA1088476

WGS

Cameroon - Africa

2021

SRR28387216

PRJNA1088476

WGS

Cameroon - Africa

2021

SRR28387217

PRJNA1088476

WGS

Cameroon - Africa

2021

SRR28387218

PRJNA1088476

WGS

Cameroon - Africa

2021

SRR28387219

PRJNA1088476

WGS

Cameroon - Africa

2021

SRR28387220

PRJNA1088476

WGS

Cameroon - Africa

2021

SRR28387221

PRJNA1088476

WGS

Cameroon - Africa

2021

SRR28387222

PRJNA1088476

WGS

Cameroon - Africa

2021

SRR28387223

PRJNA1088476

WGS

Cameroon - Africa

2021

SRR28387224

PRJNA1088476

WGS

Cameroon - Africa

2021

SRR29040028

PRJNA1111294

WGS

Laos - Asia

2021

SRR3312806

PRJNA312579

WGS

Finland - Europe

2012

SRR3312829

PRJNA312579

WGS

Finland - Europe

2012

SRR3312978

PRJNA312061

WGS

Finland - Europe

2012

SRR3312979

PRJNA312061

WGS

Finland - Europe

2012

SRR333074

PRJNA70279

WGS

-

Mar-

SRR333075

PRJNA70279

WGS

-

Mar-

SRR3480635

PRJNA291435

WGS

Mexico - North America

2012

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