Metagenome

Our database currently contains 1494 metagenome samples, covering various insect species and their microbial communities across different geographical locations and sequencing platforms. The raw data were first quality-controlled using Fastp, followed by taxonomic composition analysis through the Kraken2 workflow. Visualization was performed using Krona. Additionally, the metagenomes were assembled into contigs using Megahit, and binning was conducted with the Metabat2 workflow. High-quality MAGs were extracted based on CheckM results.

1494 Total Samples

Geographical Distribution

Proportion of data based on geographical locations

Size Distribution

Distribution of metagenome sizes

Metagenomes

1494 records

Metagenome records associated with insect symbionts from public databases worldwide.

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Host Bioproject Sequencing Type Geographic Location Collection Year Details
SRR28034364

PRJNA1062330

WGS

USA - North America

2004

SRR28034365

PRJNA1062330

WGS

USA - North America

2004

SRR28034366

PRJNA1062330

WGS

Germany - Europe

2014

SRR28034367

PRJNA1062330

WGS

Germany - Europe

2014

SRR28034368

PRJNA1062330

WGS

Germany - Europe

2014

SRR28034369

PRJNA1062330

WGS

Australia - Oceania

2010

SRR28034370

PRJNA1062330

WGS

Australia - Oceania

2010

SRR28089899

PRJNA720281

WGS

China - Asia

2021

SRR28089900

PRJNA720281

WGS

China - Asia

2021

SRR28089901

PRJNA720281

WGS

China - Asia

2021

SRR28113947

PRJNA1062330

WGS

Belgium - Europe

2019

SRR28113948

PRJNA1062330

WGS

Belgium - Europe

2019

SRR28387163

PRJNA1088476

WGS

Cameroon - Africa

2021

SRR28387164

PRJNA1088476

WGS

Cameroon - Africa

2021

SRR28387165

PRJNA1088476

WGS

Cameroon - Africa

2021

SRR28387168

PRJNA1088476

WGS

Cameroon - Africa

2021

SRR28387174

PRJNA1088476

WGS

Cameroon - Africa

2021

SRR28387175

PRJNA1088476

WGS

Cameroon - Africa

2021

SRR28387176

PRJNA1088476

WGS

Cameroon - Africa

2021

SRR28387177

PRJNA1088476

WGS

Cameroon - Africa

2021

SRR28387178

PRJNA1088476

WGS

Cameroon - Africa

2021

SRR28387179

PRJNA1088476

WGS

Cameroon - Africa

2021

SRR28387180

PRJNA1088476

WGS

Cameroon - Africa

2021

SRR28387181

PRJNA1088476

WGS

Cameroon - Africa

2021

SRR28387182

PRJNA1088476

WGS

Cameroon - Africa

2021

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