Metagenome

Our database currently contains 1494 metagenome samples, covering various insect species and their microbial communities across different geographical locations and sequencing platforms. The raw data were first quality-controlled using Fastp, followed by taxonomic composition analysis through the Kraken2 workflow. Visualization was performed using Krona. Additionally, the metagenomes were assembled into contigs using Megahit, and binning was conducted with the Metabat2 workflow. High-quality MAGs were extracted based on CheckM results.

1494 Total Samples

Geographical Distribution

Proportion of data based on geographical locations

Size Distribution

Distribution of metagenome sizes

Metagenomes

1494 records

Metagenome records associated with insect symbionts from public databases worldwide.

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Host Bioproject Sequencing Type Geographic Location Collection Year Details
SRR27609074

PRJNA1066198

WGS

Canada - North America

2021

SRR27609075

PRJNA1066198

WGS

Canada - North America

2021

SRR27609076

PRJNA1066198

WGS

Canada - North America

2021

SRR27609077

PRJNA1066198

WGS

Canada - North America

2021

SRR27609078

PRJNA1066198

WGS

Canada - North America

2021

SRR27811357

PRJNA1068458

WGS

Germany - Europe

2019

SRR27811358

PRJNA1068458

WGS

Germany - Europe

2019

SRR27811404

PRJNA1068458

WGS

USA - North America

2018

SRR27811405

PRJNA1068458

WGS

USA - North America

2018

SRR27811406

PRJNA1068458

WGS

USA - North America

2018

SRR27811407

PRJNA1068458

WGS

USA - North America

2018

SRR27811408

PRJNA1068458

WGS

Germany - Europe

2014

SRR27811409

PRJNA1068458

WGS

Germany - Europe

2014

SRR27811410

PRJNA1068458

WGS

Germany - Europe

2014

SRR27811411

PRJNA1068458

WGS

Italy - Europe

2015

SRR27811412

PRJNA1068458

WGS

Italy - Europe

2015

SRR27811413

PRJNA1068458

WGS

Italy - Europe

2015

SRR27811432

PRJNA1068458

WGS

USA - North America

2017

SRR27811433

PRJNA1068458

WGS

Italy - Europe

2020

SRR27811434

PRJNA1068458

WGS

Italy - Europe

2020

SRR27811435

PRJNA1068458

WGS

Germany - Europe

2022

SRR27811436

PRJNA1068458

WGS

Germany - Europe

2022

SRR27811437

PRJNA1068458

WGS

Germany - Europe

2022

SRR27811458

PRJNA1068458

WGS

USA - North America

2016

SRR27811459

PRJNA1068458

WGS

USA - North America

2016

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