Metagenome

Our database currently contains 1494 metagenome samples, covering various insect species and their microbial communities across different geographical locations and sequencing platforms. The raw data were first quality-controlled using Fastp, followed by taxonomic composition analysis through the Kraken2 workflow. Visualization was performed using Krona. Additionally, the metagenomes were assembled into contigs using Megahit, and binning was conducted with the Metabat2 workflow. High-quality MAGs were extracted based on CheckM results.

1494 Total Samples

Geographical Distribution

Proportion of data based on geographical locations

Size Distribution

Distribution of metagenome sizes

Metagenomes

1494 records

Metagenome records associated with insect symbionts from public databases worldwide.

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Host Bioproject Sequencing Type Geographic Location Collection Year Details
SRR24540932

PRJNA948024

WGS

USA - North America

2018

SRR24540945

PRJNA948024

WGS

USA - North America

2018

SRR24540946

PRJNA948024

WGS

USA - North America

2018

SRR24709531

PRJNA724724

WGS

India - Asia

2017

SRR24709532

PRJNA724724

WGS

India - Asia

2017

SRR24709533

PRJNA724724

WGS

India - Asia

2017

SRR24762862

PRJNA918574

WGS

Brazil - South America

2019

SRR24762863

PRJNA918574

WGS

Brazil - South America

2019

SRR24762864

PRJNA918574

WGS

Brazil - South America

2019

SRR24762865

PRJNA918574

WGS

Brazil - South America

2019

SRR24762866

PRJNA918574

WGS

Brazil - South America

2019

SRR24762867

PRJNA918574

WGS

Brazil - South America

2016

SRR24762868

PRJNA918574

WGS

Brazil - South America

2015

SRR24762869

PRJNA918574

WGS

Brazil - South America

2015

SRR24762870

PRJNA918574

WGS

Brazil - South America

2019

SRR24762871

PRJNA918574

WGS

Brazil - South America

2019

SRR24762872

PRJNA918574

WGS

Brazil - South America

2019

SRR24762873

PRJNA918574

WGS

Brazil - South America

2019

SRR24762874

PRJNA918574

WGS

Brazil - South America

2019

SRR24762875

PRJNA918574

WGS

Brazil - South America

2019

SRR24762876

PRJNA918574

WGS

Brazil - South America

2019

SRR24762877

PRJNA918574

WGS

Brazil - South America

2019

SRR24762878

PRJNA918574

WGS

Brazil - South America

2019

SRR24762879

PRJNA918574

WGS

Brazil - South America

2014

SRR24762880

PRJNA918574

WGS

Brazil - South America

2014

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