Metagenome

Our database currently contains 1494 metagenome samples, covering various insect species and their microbial communities across different geographical locations and sequencing platforms. The raw data were first quality-controlled using Fastp, followed by taxonomic composition analysis through the Kraken2 workflow. Visualization was performed using Krona. Additionally, the metagenomes were assembled into contigs using Megahit, and binning was conducted with the Metabat2 workflow. High-quality MAGs were extracted based on CheckM results.

1494 Total Samples

Geographical Distribution

Proportion of data based on geographical locations

Size Distribution

Distribution of metagenome sizes

Metagenomes

1494 records

Metagenome records associated with insect symbionts from public databases worldwide.

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Host Bioproject Sequencing Type Geographic Location Collection Year Details
SRR11031509

PRJNA604900

WGS

India - Asia

2019

SRR11031510

PRJNA604900

WGS

India - Asia

2019

SRR11929553

PRJNA636935

WGS

China - Asia

2019

SRR11929554

PRJNA636935

WGS

China - Asia

2019

SRR12112864

PRJNA642181

WGS

USA - North America

2016

SRR12231018

PRJNA384880

WGS

USA - North America

2017

SRR12513790

PRJNA658779

WGS

Mexico - North America

2017

SRR12513816

PRJNA658782

WGS

Mexico - North America

2017

SRR12534292

PRJNA659554

WGS

Nigeria - Africa

2015

SRR12534293

PRJNA659554

WGS

Japan - Asia

2014

SRR12668443

PRJNA663749

WGS

India - Asia

2017

SRR12668444

PRJNA663749

WGS

India - Asia

2017

SRR12668445

PRJNA663749

WGS

India - Asia

2017

SRR12668446

PRJNA663749

WGS

India - Asia

2018

SRR12668447

PRJNA663749

WGS

India - Asia

2018

SRR12668448

PRJNA663749

WGS

India - Asia

2017

SRR12668449

PRJNA663749

WGS

India - Asia

2018

SRR12668450

PRJNA663749

WGS

India - Asia

2017

SRR12668451

PRJNA663749

WGS

India - Asia

2017

SRR12668452

PRJNA663749

WGS

India - Asia

2018

SRR12668453

PRJNA663749

WGS

India - Asia

2017

SRR12668454

PRJNA663749

WGS

India - Asia

2018

SRR12668455

PRJNA663749

WGS

India - Asia

2018

SRR12668456

PRJNA663749

WGS

India - Asia

2018

SRR12668457

PRJNA663749

WGS

India - Asia

2018

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