Metagenome

Our database currently contains 1494 metagenome samples, covering various insect species and their microbial communities across different geographical locations and sequencing platforms. The raw data were first quality-controlled using Fastp, followed by taxonomic composition analysis through the Kraken2 workflow. Visualization was performed using Krona. Additionally, the metagenomes were assembled into contigs using Megahit, and binning was conducted with the Metabat2 workflow. High-quality MAGs were extracted based on CheckM results.

1494 Total Samples

Geographical Distribution

Proportion of data based on geographical locations

Size Distribution

Distribution of metagenome sizes

Metagenomes

1494 records

Metagenome records associated with insect symbionts from public databases worldwide.

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Host Bioproject Sequencing Type Geographic Location Collection Year Details
SRR23076799

PRJNA923375

WGS

Chile - South America

2017

SRR23076810

PRJNA923375

WGS

USA - North America

2017

SRR23076813

PRJNA923375

WGS

USA - North America

2016

SRR23076814

PRJNA923375

WGS

USA - North America

2016

SRR23076815

PRJNA923375

WGS

USA - North America

2016

SRR23076816

PRJNA923375

WGS

Chile - South America

2014

SRR23076817

PRJNA923375

WGS

Chile - South America

2014

SRR23076818

PRJNA923375

WGS

Chile - South America

2014

SRR23076819

PRJNA923375

WGS

USA - North America

2017

SRR23076820

PRJNA923375

WGS

USA - North America

2017

SRR23076821

PRJNA923375

WGS

USA - North America

2017

SRR23076822

PRJNA923375

WGS

USA - North America

2017

SRR23250316

PRJNA918957

OTHER

France - Europe

2011

SRR23250317

PRJNA918957

OTHER

France - Europe

2011

SRR23250318

PRJNA918957

OTHER

France - Europe

2011

SRR23250319

PRJNA918957

OTHER

France - Europe

2011

SRR23250320

PRJNA918957

OTHER

France - Europe

2011

SRR23250321

PRJNA918957

OTHER

France - Europe

2011

SRR23250322

PRJNA918957

OTHER

France - Europe

2011

SRR23250323

PRJNA918957

OTHER

France - Europe

2011

SRR23250324

PRJNA918957

OTHER

France - Europe

2011

SRR23250325

PRJNA918957

OTHER

France - Europe

2011

SRR23250326

PRJNA918957

OTHER

France - Europe

2011

SRR23250327

PRJNA918957

OTHER

France - Europe

2011

SRR23250328

PRJNA918957

OTHER

France - Europe

2011

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