Metagenome

Our database currently contains 1494 metagenome samples, covering various insect species and their microbial communities across different geographical locations and sequencing platforms. The raw data were first quality-controlled using Fastp, followed by taxonomic composition analysis through the Kraken2 workflow. Visualization was performed using Krona. Additionally, the metagenomes were assembled into contigs using Megahit, and binning was conducted with the Metabat2 workflow. High-quality MAGs were extracted based on CheckM results.

1494 Total Samples

Geographical Distribution

Proportion of data based on geographical locations

Size Distribution

Distribution of metagenome sizes

Metagenomes

1494 records

Metagenome records associated with insect symbionts from public databases worldwide.

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Host Bioproject Sequencing Type Geographic Location Collection Year Details
SRR22996351

PRJNA918957

RNA-Seq

France - Europe

2011

SRR22996352

PRJNA918957

RNA-Seq

France - Europe

2011

SRR22996353

PRJNA918957

RNA-Seq

France - Europe

2011

SRR22996354

PRJNA918957

RNA-Seq

France - Europe

2011

SRR22996355

PRJNA918957

RNA-Seq

France - Europe

2011

SRR22996356

PRJNA918957

RNA-Seq

France - Europe

2011

SRR22996357

PRJNA918957

RNA-Seq

France - Europe

2011

SRR23015428

PRJNA918702

WGS

-

2022

SRR23015429

PRJNA918702

WGS

China - Asia

2022

SRR23015430

PRJNA918702

WGS

China - Asia

2021

SRR23015431

PRJNA918702

WGS

China - Asia

2021

SRR23015432

PRJNA918702

WGS

China - Asia

2021

SRR23015433

PRJNA918702

WGS

China - Asia

2021

SRR23015434

PRJNA918702

WGS

China - Asia

2021

SRR23015439

PRJNA918702

WGS

China - Asia

2021

SRR23015448

PRJNA918702

WGS

USA - North America

2022

SRR23015449

PRJNA918702

WGS

China - Asia

2022

SRR23015450

PRJNA918702

WGS

China - Asia

2021

SRR23015451

PRJNA918702

WGS

China - Asia

2021

SRR23076787

PRJNA923375

WGS

USA - North America

2017

SRR23076788

PRJNA923375

WGS

Chile - South America

2017

SRR23076789

PRJNA923375

WGS

Chile - South America

2017

SRR23076790

PRJNA923375

WGS

Chile - South America

2017

SRR23076791

PRJNA923375

WGS

Chile - South America

2017

SRR23076792

PRJNA923375

WGS

Chile - South America

2017

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