Metagenome

Our database currently contains 1494 metagenome samples, covering various insect species and their microbial communities across different geographical locations and sequencing platforms. The raw data were first quality-controlled using Fastp, followed by taxonomic composition analysis through the Kraken2 workflow. Visualization was performed using Krona. Additionally, the metagenomes were assembled into contigs using Megahit, and binning was conducted with the Metabat2 workflow. High-quality MAGs were extracted based on CheckM results.

1494 Total Samples

Geographical Distribution

Proportion of data based on geographical locations

Size Distribution

Distribution of metagenome sizes

Metagenomes

1494 records

Metagenome records associated with insect symbionts from public databases worldwide.

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Host Bioproject Sequencing Type Geographic Location Collection Year Details
SRR22520361

PRJNA907216

WGS

China - Asia

2022

SRR22520362

PRJNA907216

WGS

China - Asia

2022

SRR22520363

PRJNA907216

WGS

China - Asia

2022

SRR22536326

PRJNA905450

WGS

Costa Rica - North America

2017

SRR22536686

PRJNA905450

WGS

Costa Rica - North America

2017

SRR22996327

PRJNA918957

RNA-Seq

France - Europe

2011

SRR22996328

PRJNA918957

RNA-Seq

France - Europe

2011

SRR22996333

PRJNA918957

RNA-Seq

France - Europe

2011

SRR22996334

PRJNA918957

RNA-Seq

France - Europe

2011

SRR22996335

PRJNA918957

RNA-Seq

France - Europe

2011

SRR22996336

PRJNA918957

RNA-Seq

France - Europe

2011

SRR22996337

PRJNA918957

RNA-Seq

France - Europe

2011

SRR22996338

PRJNA918957

RNA-Seq

France - Europe

2011

SRR22996339

PRJNA918957

RNA-Seq

France - Europe

2011

SRR22996340

PRJNA918957

RNA-Seq

France - Europe

2011

SRR22996341

PRJNA918957

RNA-Seq

France - Europe

2011

SRR22996342

PRJNA918957

RNA-Seq

France - Europe

2011

SRR22996343

PRJNA918957

RNA-Seq

France - Europe

2011

SRR22996344

PRJNA918957

RNA-Seq

France - Europe

2011

SRR22996345

PRJNA918957

RNA-Seq

France - Europe

2011

SRR22996346

PRJNA918957

RNA-Seq

France - Europe

2011

SRR22996347

PRJNA918957

RNA-Seq

France - Europe

2011

SRR22996348

PRJNA918957

RNA-Seq

France - Europe

2011

SRR22996349

PRJNA918957

RNA-Seq

France - Europe

2011

SRR22996350

PRJNA918957

RNA-Seq

France - Europe

2011

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