Hypothenemus hampei
coffee borer beetle or coffee berry borer
Hypothenemus hampei is a small beetle native to Africa. It is among the most harmful pests to coffee crops across the world where coffee is cultivated.Spanish common names of the insect include barrenador del café, gorgojo del café, and broca del café.
Host Genome
Scaffold| Genome ID | Level | BUSCO Assessment |
|---|---|---|
| GCA_013372445.1 | Scaffold |
C:95.2%[S:90.8%,D:4.4%],F:2.7%,M:2.1%,n:1367
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Download Genome Files
Related Symbionts
18 recordsSymbiont records associated with Hypothenemus hampei
| Classification | Function | Function Tags | Reference | |
|---|---|---|---|---|
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Pseudomonas fulva
Pseudomonadota |
Bacteria
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Antibiotic-treated larvae showed lower caffeine-degrading activity and increased mortality. These deficients were recovered by inoculation of the caf… |
Plant secondary metabolites
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Pseudomonas fulva
Pseudomonadota |
Bacteria
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P. fulva processed gene coding one subunit of caffeine demethylase, and reinstatement of P. fulva in germ-free H. hampei degraded all caffeine consum… |
Plant secondary metabolites
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Acinetobacter sp.
Pseudomonadota |
Bacteria
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might contribute to caffeine breakdown using the C-11 oxidation pathway |
Plant secondary metabolites
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Delftia sp.
Pseudomonadota |
Bacteria
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might contribute to caffeine breakdown using the C-19 oxidation pathway |
Plant secondary metabolites
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Enterococcus sp.
Bacillota |
Bacteria
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might contribute to caffeine breakdown using the C-10 oxidation pathway |
Plant secondary metabolites
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Erwinia sp.
Pseudomonadota |
Bacteria
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might contribute to caffeine breakdown using the C-12 oxidation pathway |
Plant secondary metabolites
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Klebsiella sp.
Pseudomonadota |
Bacteria
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might contribute to caffeine breakdown using the C-17 oxidation pathway |
Plant secondary metabolites
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Kosakonia sp.
Pseudomonadota |
Bacteria
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might contribute to caffeine breakdown using the C-16 oxidation pathway |
Plant secondary metabolites
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Lactococcus sp.
Bacillota |
Bacteria
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might contribute to caffeine breakdown using the C-13 oxidation pathway |
Plant secondary metabolites
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Leuconostoc sp.
Bacillota |
Bacteria
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might contribute to caffeine breakdown using the C-18 oxidation pathway |
Plant secondary metabolites
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Pantoea sp.
Pseudomonadota |
Bacteria
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might contribute to caffeine breakdown using the C-14 oxidation pathway |
Plant secondary metabolites
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Pseudomonas sp.
Pseudomonadota |
Bacteria
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might contribute to caffeine breakdown using the C-15 oxidation pathway |
Plant secondary metabolites
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Stenotrophomonas sp.
Pseudomonadota |
Bacteria
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might contribute to caffeine breakdown using the C-20 oxidation pathway |
Plant secondary metabolites
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Bacillus sp.
Bacillota |
Bacteria
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might contribute to caffeine breakdown using the C-8 oxidation pathway |
Plant secondary metabolites
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Paenibacillus sp.
Bacillota |
Bacteria
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might contribute to caffeine breakdown using the C-9 oxidation pathway |
Plant secondary metabolites
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Pseudomonas fulva
Pseudomonadota |
Bacteria
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Detoxification of plant secondary compounds |
Plant secondary metabolites
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Bacteria
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Bacteria
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Metagenome Information
0 recordsMetagenome sequencing data associated with Hypothenemus hampei
| Run | Platform | Location | Date | BioProject |
|---|---|---|---|---|
No metagenomes foundNo metagenome records associated with this host species. |
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Amplicon Information
0 recordsAmplicon sequencing data associated with Hypothenemus hampei
| Run | Classification | Platform | Location | Environment |
|---|---|---|---|---|
No amplicons foundNo amplicon records associated with this host species. |
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Related Articles
3 recordsResearch articles related to Hypothenemus hampei
| Title | Authors | Journal | Year | DOI |
|---|---|---|---|---|
|
Vega, FE; Emche, S; Shao, J ... Aoki, S; Maul, JE
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FRONTIERS IN MICROBIOLOGY
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2021
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10.3389/fmicb.2021.644768 | |
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Mejía-Alvarado, FS; Ghneim-Herrera, T; Góngora, CE; Benavides, P; Navarro-Escalante, L
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FRONTIERS IN MICROBIOLOGY
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2021
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10.3389/fmicb.2021.639868 | |
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Mariño, YA; Ospina, OE; Rodrigues, JCV; Bayman, P
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JOURNAL OF APPLIED MICROBIOLOGY
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2018
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10.1111/jam.13768 |