Insect Symbiont Genomes

A comprehensive collection of insect symbiont genomes from both metagenome-assembled genomes (MAGs), literature records and public databases. Our database currently contains 3648 insect symbionts genomes, providing valuable resources for understanding the genomic features and evolution of insect symbionts.

3895 Total Genomes

Genome Sources

Distribution of genome sources

Genome Quality

Distribution of genome quality metrics

Note: The quality score (QS) defined as 'Completeness − 5 × Contamination' estimated with CheckM

Genome Catalog

3895 records

Catalog of insect symbiont genomes and related information.

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Source ID Host Completeness Contamination GTDB Classification Actions
GISB0236 Rickettsia MEAM1 Israel
RISB1896 Bemisia tabaci 98.10% 0.47%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rickettsiales;f__Rickettsiaceae;g__Rickettsia;s__Rickettsia sp002285905
GISB0237 Serratia marcescens
RISB1674 Anopheles stephensi 99.81% 0.45%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Serratia;s__Serratia nevei
GISB0238 Serratia marcescens
RISB1674 Anopheles stephensi 99.81% 0.00%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Serratia;s__Serratia nevei
GISB0239 Candidatus Karelsulcia muelleri strain Gra
RISB1592 Graphocephala coccinea 43.41% 0.18%
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales_B;f__Blattabacteriaceae;g__Sulcia;s__
GISB0240 Citrobacter freundii
RISB1677 Bactrocera dorsalis 99.57% 0.38%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Citrobacter;s__Citrobacter europaeus
GISB0241 Bacillus toyonensis VU-DES13
RISB1350 Folsomia candida 99.34% 0.26%
d__Bacteria;p__Bacillota;c__Bacilli;o__Bacillales;f__Bacillaceae_G;g__Bacillus_A;s__Bacillus_A toyonensis
GISB0242 Lactiplantibacillus plantarum
RISB1743 Drosophila melanogaster 99.38% 2.78%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactiplantibacillus;s__Lactiplantibacillus plantarum
GISB0243 Acetobacter oryzifermentans
RISB1742 Drosophila melanogaster 100.00% 1.00%
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Acetobacter;s__Acetobacter oryzifermentans
GISB0244 Sodalis-like symbiont
RISB1596 Graphocephala coccinea 98.08% 33.33%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__;s__
GISB0245 Candidatus Karelsulcia muelleri strain Neo
RISB1593 Neotibicen canicularis 45.44% 4.09%
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales_B;f__Blattabacteriaceae;g__Sulcia;s__Sulcia muelleri
GISB0246 Candidatus Dactylopiibacterium carminicum NFDO
RISB1635 Dactylopius coccus 94.62% 1.24%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Dactylopiibacterium;s__Dactylopiibacterium carminicum
GISB0247 Candidatus Dactylopiibacterium carminicum NFDCM
RISB1637 Dactylopius coccus 94.82% 1.24%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Dactylopiibacterium;s__Dactylopiibacterium carminicum
GISB0248 Candidatus Dactylopiibacterium carminicum
RISB1638 Dactylopius coccus 94.82% 1.24%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Dactylopiibacterium;s__Dactylopiibacterium carminicum
GISB0249 Tremblaya phenacolaPPER
RISB1782 Phenacoccus peruvianus 53.03% 0.00%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae_A;g__Tremblaya;s__Tremblaya phenacola_C
GISB0250 Candidatus Stammera capleta
RISB1659 Multiple species 77.08% 0.00%
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae_A;g__Stammera;s__Stammera capleta
GISB0251 Lactobacillus plantarum FlyG2.1.8
RISB1465 Drosophila melanogaster 98.15% 2.78%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactiplantibacillus;s__Lactiplantibacillus plantarum
GISB0252 Lactobacillus plantarum FlyG8.1.1
RISB1468 Drosophila melanogaster 98.46% 2.78%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactiplantibacillus;s__Lactiplantibacillus plantarum
GISB0253 Lactobacillus plantarum FlyG8.1.2
RISB1469 Drosophila melanogaster 98.46% 2.16%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactiplantibacillus;s__Lactiplantibacillus plantarum
GISB0254 Lactobacillus plantarum FlyG9.1.4
RISB1470 Drosophila melanogaster 98.46% 2.78%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactiplantibacillus;s__Lactiplantibacillus plantarum
GISB0255 Lactobacillus plantarum FlyG1None.1.5
RISB1471 Drosophila melanogaster 99.07% 2.78%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactiplantibacillus;s__Lactiplantibacillus plantarum
GISB0256 Lactobacillus plantarum FlyG2None.1.4
RISB1475 Drosophila melanogaster 98.46% 2.78%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactiplantibacillus;s__Lactiplantibacillus plantarum
GISB0257 Lactobacillus plantarum FlyG2None.2.6
RISB1478 Drosophila melanogaster 98.46% 2.78%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactiplantibacillus;s__Lactiplantibacillus plantarum
GISB0258 Lactobacillus plantarum FlyG11.2.6
RISB1477 Drosophila melanogaster 98.15% 2.78%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactiplantibacillus;s__Lactiplantibacillus plantarum
GISB0259 Lactobacillus plantarum FlyG9.2.5
RISB1476 Drosophila melanogaster 98.46% 2.78%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactiplantibacillus;s__Lactiplantibacillus plantarum
GISB0260 Lactobacillus plantarum FlyG2None.1.2
RISB1479 Drosophila melanogaster 98.46% 2.78%
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactiplantibacillus;s__Lactiplantibacillus plantarum